Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_J20
(225 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37330| Best HMM Match : S-antigen (HMM E-Value=4.1e-09) 32 0.064
SB_6865| Best HMM Match : NCD3G (HMM E-Value=3) 30 0.26
SB_5351| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.45
SB_53103| Best HMM Match : DUF1388 (HMM E-Value=0.29) 29 0.60
SB_42467| Best HMM Match : Borrelia_orfA (HMM E-Value=1.7) 29 0.79
SB_2774| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.79
SB_12646| Best HMM Match : SSrecog (HMM E-Value=0) 28 1.0
SB_6176| Best HMM Match : Bromo_TP (HMM E-Value=1.5e-23) 28 1.4
SB_46753| Best HMM Match : Fimbrial_CS1 (HMM E-Value=1.1) 28 1.4
SB_18612| Best HMM Match : DUF1186 (HMM E-Value=2.4) 28 1.4
SB_11507| Best HMM Match : SIR2 (HMM E-Value=3.4e-11) 27 1.8
SB_40492| Best HMM Match : PROCN (HMM E-Value=0) 27 2.4
SB_29154| Best HMM Match : RNA_pol_Rpb2_7 (HMM E-Value=2.3) 27 2.4
SB_44471| Best HMM Match : TFIIF_beta (HMM E-Value=1.3) 27 2.4
SB_42837| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.4
SB_27902| Best HMM Match : RNA_pol_Rpb2_7 (HMM E-Value=2.3) 27 2.4
SB_26086| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.4
SB_53148| Best HMM Match : rve (HMM E-Value=4.8e-21) 27 3.2
SB_43863| Best HMM Match : FLO_LFY (HMM E-Value=1.5) 27 3.2
SB_6510| Best HMM Match : Vicilin_N (HMM E-Value=0.44) 27 3.2
SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13) 27 3.2
SB_24053| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.2
SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0) 27 3.2
SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 4.2
SB_17956| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 4.2
SB_37029| Best HMM Match : 7tm_1 (HMM E-Value=4.2039e-45) 26 4.2
SB_32355| Best HMM Match : Laminin_EGF (HMM E-Value=0) 26 4.2
SB_19195| Best HMM Match : LEA_4 (HMM E-Value=0.00053) 26 4.2
SB_49223| Best HMM Match : DUF310 (HMM E-Value=5.7) 26 5.6
SB_35970| Best HMM Match : DUF310 (HMM E-Value=9.4) 26 5.6
SB_29972| Best HMM Match : zf-CCHC (HMM E-Value=9.3e-05) 26 5.6
SB_26233| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.6
SB_22016| Best HMM Match : HSP90 (HMM E-Value=0) 26 5.6
SB_9953| Best HMM Match : VWA (HMM E-Value=0) 26 5.6
SB_59670| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.6
SB_54200| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.6
SB_47642| Best HMM Match : RVT_1 (HMM E-Value=6.7e-21) 26 5.6
SB_41747| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.6
SB_35395| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.6
SB_31976| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.6
SB_27795| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.6
SB_27045| Best HMM Match : zf-CCHC (HMM E-Value=9.3e-05) 26 5.6
SB_19477| Best HMM Match : GST_C (HMM E-Value=0.64) 26 5.6
SB_14037| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.6
SB_10467| Best HMM Match : zf-PARP (HMM E-Value=5.6e-35) 26 5.6
SB_9010| Best HMM Match : RVP (HMM E-Value=0.14) 26 5.6
SB_1676| Best HMM Match : zf-CCHC (HMM E-Value=9.3e-05) 26 5.6
SB_33336| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 7.4
SB_19444| Best HMM Match : zf-C3HC4 (HMM E-Value=0.011) 25 7.4
SB_39225| Best HMM Match : NIF (HMM E-Value=0) 25 9.7
SB_32762| Best HMM Match : Extensin_2 (HMM E-Value=0.062) 25 9.7
SB_20744| Best HMM Match : CH (HMM E-Value=0.92) 25 9.7
>SB_37330| Best HMM Match : S-antigen (HMM E-Value=4.1e-09)
Length = 818
Score = 32.3 bits (70), Expect = 0.064
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +1
Query: 13 SSDEVEEKKPSKGKSRQKVKDRLSLDQNKYGKNKKKQFNQFIVEEGQGNAEKLQKRAE 186
+ D +KK SK KS+ K K++ +NK ++K K+ EE N E+ K E
Sbjct: 427 TDDGKTDKKKSKKKSKDKSKNKGEKSKNKEEESKNKEEKSKNKEEESKNKEEESKNKE 484
>SB_6865| Best HMM Match : NCD3G (HMM E-Value=3)
Length = 281
Score = 30.3 bits (65), Expect = 0.26
Identities = 13/41 (31%), Positives = 26/41 (63%)
Frame = +1
Query: 10 TSSDEVEEKKPSKGKSRQKVKDRLSLDQNKYGKNKKKQFNQ 132
TSS+++++ KP KG+S + K+ + + YGK ++ N+
Sbjct: 174 TSSNKLKDSKPVKGRSGRLTKNAIEKLKKYYGKAIRENVNK 214
>SB_5351| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 870
Score = 29.5 bits (63), Expect = 0.45
Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +1
Query: 4 SSTSSDEVEEKKPSKGKSRQKVKDRLSLDQNKYGKNKKKQFNQFIVEE--GQGNAEKLQK 177
SS + VEEK+ K + ++K+K L++ + + + K +F E+ + E+++K
Sbjct: 414 SSENRKTVEEKERKKKEEQEKIKREEELEEQRLEEQRIKMQKEFEEEQEKARRKEEEVRK 473
Query: 178 RAE 186
R E
Sbjct: 474 RNE 476
>SB_53103| Best HMM Match : DUF1388 (HMM E-Value=0.29)
Length = 462
Score = 29.1 bits (62), Expect = 0.60
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +1
Query: 28 EEKKPSKGKSRQ-KVKDRLSLDQNKYGKNKKKQFNQFIVEEGQGNAEKLQKRA 183
E+K P +GK+++ + K R + +N +++ Q + EEG+ +K QKRA
Sbjct: 51 EQKPPEEGKNKKHQKKARTETPEEGKNRNTRRRQEQKLPEEGKN--KKHQKRA 101
Score = 25.4 bits (53), Expect = 7.4
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = +1
Query: 28 EEKKPSKGKSRQKVKDRLSLDQNKYGKNKKKQFNQFIVEEGQGNAEKLQKR 180
E+K P +GK++ K + GKNK Q I +G +K +R
Sbjct: 241 EQKTPEEGKNKNHQKQEQKTPEE--GKNKNHQKRARIETPEEGKKKKNTRR 289
Score = 25.0 bits (52), Expect = 9.7
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 40 PSKGKSRQKVKDRLSLDQNKYGKNKKKQ 123
P +GK ++ + RL + GKN+K Q
Sbjct: 278 PEEGKKKKNTRRRLEQKTPEEGKNRKPQ 305
>SB_42467| Best HMM Match : Borrelia_orfA (HMM E-Value=1.7)
Length = 810
Score = 28.7 bits (61), Expect = 0.79
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = +1
Query: 10 TSSDEVEEKKPSKGKSRQKVKDRLSLDQNKYGKNKKKQFNQFIVEEGQGNAEKLQKRAER 189
T S++ P+ K + K S D+ GKNKK + +V++ A+ +KR
Sbjct: 587 TDSNKHHSDSPTNKKHKHKHSSP-SQDEAADGKNKKSVQEKSVVDKSGKPAKASKKREHS 645
Query: 190 FAGG 201
+GG
Sbjct: 646 ISGG 649
>SB_2774| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 322
Score = 28.7 bits (61), Expect = 0.79
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +1
Query: 1 ASSTSSDEVEEKKPSKGKSRQKVKDRLSLDQNKYGKNKKK 120
A + + +EK K K ++K KD+ + +++ GK+K K
Sbjct: 274 AEKDEASKKDEKSKEKEKEKEKEKDKDTKEKDSQGKSKDK 313
>SB_12646| Best HMM Match : SSrecog (HMM E-Value=0)
Length = 783
Score = 28.3 bits (60), Expect = 1.0
Identities = 12/56 (21%), Positives = 29/56 (51%)
Frame = +1
Query: 28 EEKKPSKGKSRQKVKDRLSLDQNKYGKNKKKQFNQFIVEEGQGNAEKLQKRAERFA 195
++K PSK S+ +++ S + N+K + +F+ G + + +K+ + +A
Sbjct: 621 KKKSPSKKASKAPKEEKSSSPRKSLDNNQKFKSAEFVESSGDSSDSEAEKKKQGYA 676
>SB_6176| Best HMM Match : Bromo_TP (HMM E-Value=1.5e-23)
Length = 684
Score = 27.9 bits (59), Expect = 1.4
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
Frame = +1
Query: 4 SSTSSDEVEEKKPSKGKSRQKVKDRLSL----DQNKYGKNKKKQFNQ 132
S+ DEV +KK K K + K KD+ Q+K+ + K KQ N+
Sbjct: 462 SNPLGDEVIKKKKKKHKDKDKTKDKHKTKKVETQDKHKRKKIKQENK 508
>SB_46753| Best HMM Match : Fimbrial_CS1 (HMM E-Value=1.1)
Length = 982
Score = 27.9 bits (59), Expect = 1.4
Identities = 16/57 (28%), Positives = 32/57 (56%)
Frame = +1
Query: 19 DEVEEKKPSKGKSRQKVKDRLSLDQNKYGKNKKKQFNQFIVEEGQGNAEKLQKRAER 189
D V+EK+ ++ + K +++ +Q K KNK+KQ + E+ + EK ++ E+
Sbjct: 807 DMVQEKQDNEQEKPDKGEEKQDQEQGKPDKNKEKQDRE--QEKPDKDLEKQYQKQEK 861
>SB_18612| Best HMM Match : DUF1186 (HMM E-Value=2.4)
Length = 692
Score = 27.9 bits (59), Expect = 1.4
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = +2
Query: 164 KNFKRELKDLLVEHVYP 214
KN+K +++ +LV+HVYP
Sbjct: 38 KNYKDQMETMLVQHVYP 54
>SB_11507| Best HMM Match : SIR2 (HMM E-Value=3.4e-11)
Length = 813
Score = 27.5 bits (58), Expect = 1.8
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +1
Query: 43 SKGKSRQKVKDRLSLDQNKYGKNKKKQFNQFIVEEGQGNAEKLQKRAERFAG 198
+KGK + K +++L N G + ++++ F+ EG+ N E + +F G
Sbjct: 419 AKGKDEKPDKLKVNLLLNCAGADAIEEYSHFVFNEGESN-ESYEDVCRKFKG 469
>SB_40492| Best HMM Match : PROCN (HMM E-Value=0)
Length = 1784
Score = 27.1 bits (57), Expect = 2.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 8 PHLVMKLRKKNPLKVNHVRKLKTGYHWT 91
PH V+KL + P+ +R +K YH T
Sbjct: 82 PHAVLKLLENMPMPWEQIRDVKVLYHIT 109
>SB_29154| Best HMM Match : RNA_pol_Rpb2_7 (HMM E-Value=2.3)
Length = 416
Score = 27.1 bits (57), Expect = 2.4
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +1
Query: 10 TSSDEVEEKKPSKGKSRQKVKDRLSLDQNKYGKNKKKQFNQ 132
TSS+++E+ KP K +S + K+ + + YGK + N+
Sbjct: 153 TSSNKLEDGKPVKRRSGRLTKNAIEKLKKYYGKAIRDNVNK 193
>SB_44471| Best HMM Match : TFIIF_beta (HMM E-Value=1.3)
Length = 670
Score = 27.1 bits (57), Expect = 2.4
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +1
Query: 10 TSSDEVEEKKPSKGKSRQKVKDRLSLDQNKYGKNKKKQFNQ 132
TSS+++E+ KP K +S + K+ + + YGK + N+
Sbjct: 407 TSSNKLEDGKPVKRRSGRLTKNAIEKLKKYYGKAIRDNVNK 447
>SB_42837| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 27.1 bits (57), Expect = 2.4
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 28 EEKKPSKGKSRQKVKDRLSLDQNKYGKNKKKQ 123
EEKK K K ++K K + + K KNKK +
Sbjct: 15 EEKKRKKKKQKKKKKKKKKKKKKKNKKNKKNK 46
Score = 27.1 bits (57), Expect = 2.4
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 28 EEKKPSKGKSRQKVKDRLSLDQNKYGKNKKKQ 123
++KK K K ++K K + +NK KNK K+
Sbjct: 20 KKKKQKKKKKKKKKKKKKKNKKNKKNKNKNKK 51
Score = 27.1 bits (57), Expect = 2.4
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +1
Query: 28 EEKKPSKGKSRQKVKDRLSLDQNKYGKNKKKQFNQFIVEEGQGNAEKLQKRAE 186
++KK K K ++K K +NK KKK+ + EE + + L+ E
Sbjct: 23 KQKKKKKKKKKKKKKKNKKNKKNKNKNKKKKKMKKKKEEEAEVGEKTLEAENE 75
>SB_27902| Best HMM Match : RNA_pol_Rpb2_7 (HMM E-Value=2.3)
Length = 493
Score = 27.1 bits (57), Expect = 2.4
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +1
Query: 10 TSSDEVEEKKPSKGKSRQKVKDRLSLDQNKYGKNKKKQFNQ 132
TSS+++E+ KP K +S + K+ + + YGK + N+
Sbjct: 408 TSSNKLEDGKPVKRRSGRLTKNAIEKLKKYYGKAIRDNVNK 448
>SB_26086| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1511
Score = 27.1 bits (57), Expect = 2.4
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +1
Query: 34 KKPSKGKSRQKVKDRLSLDQNK 99
KKPSKGK QKVK S + +
Sbjct: 86 KKPSKGKFEQKVKPECSSTEGR 107
>SB_53148| Best HMM Match : rve (HMM E-Value=4.8e-21)
Length = 1329
Score = 26.6 bits (56), Expect = 3.2
Identities = 11/39 (28%), Positives = 24/39 (61%)
Frame = +1
Query: 43 SKGKSRQKVKDRLSLDQNKYGKNKKKQFNQFIVEEGQGN 159
+KGK + K +++L N G + ++++ F++ EG+ N
Sbjct: 36 AKGKDEKPDKLKVNLLLNCAGADAIEEYSHFVLNEGESN 74
>SB_43863| Best HMM Match : FLO_LFY (HMM E-Value=1.5)
Length = 592
Score = 26.6 bits (56), Expect = 3.2
Identities = 16/63 (25%), Positives = 31/63 (49%)
Frame = +1
Query: 1 ASSTSSDEVEEKKPSKGKSRQKVKDRLSLDQNKYGKNKKKQFNQFIVEEGQGNAEKLQKR 180
A +T S+ ++ S GK++ K KD+ S +++K K ++ + + +K K
Sbjct: 377 ADTTGSESEGKRGESVGKTKSKDKDKESREKDKEKKEERDLDKNSSERKEKHERDKEAKT 436
Query: 181 AER 189
ER
Sbjct: 437 KER 439
>SB_6510| Best HMM Match : Vicilin_N (HMM E-Value=0.44)
Length = 270
Score = 26.6 bits (56), Expect = 3.2
Identities = 14/54 (25%), Positives = 30/54 (55%)
Frame = +1
Query: 28 EEKKPSKGKSRQKVKDRLSLDQNKYGKNKKKQFNQFIVEEGQGNAEKLQKRAER 189
E+ +K ++ +KDRL+ + + K KK++ + E+ +L++RAE+
Sbjct: 116 EKTMMNKEAAQDTLKDRLARRRAEREKKKKEEEERLKAEQEAEQEAELKRRAEQ 169
>SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13)
Length = 270
Score = 26.6 bits (56), Expect = 3.2
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 19 DEVEEKKPSKGKSRQKVKDRLSLDQNKYGKNKKKQ 123
++ EEK+ KG+ R K R ++K GK K K+
Sbjct: 184 EDFEEKEKKKGRVRSTKKMRSLKGKSKNGKRKLKK 218
>SB_24053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2557
Score = 26.6 bits (56), Expect = 3.2
Identities = 14/54 (25%), Positives = 30/54 (55%)
Frame = +1
Query: 28 EEKKPSKGKSRQKVKDRLSLDQNKYGKNKKKQFNQFIVEEGQGNAEKLQKRAER 189
E+ +K ++ +KDRL+ + + K KK++ + E+ +L++RAE+
Sbjct: 2298 EKTMMNKEAAQDTLKDRLARRRAEREKKKKEEEERLKAEQEAEQEAELKRRAEQ 2351
>SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0)
Length = 442
Score = 26.6 bits (56), Expect = 3.2
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +1
Query: 22 EVEEKKPSKGKSRQKVKDRLSLDQNKYGKNKKK--QFNQFIVEEGQGNAEKLQKRAER 189
E +EK+ + K R++ KDRL + K + +KK + N I E+ + +K Q+ E+
Sbjct: 362 EKKEKERLEKKQREE-KDRLEKKEKKEEEKRKKEEEINAKIEEKKKREEKKKQEEEEK 418
>SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1323
Score = 26.2 bits (55), Expect = 4.2
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +1
Query: 4 SSTSSDEVEEKKPSKGKSRQKVKDRLSLDQNKYGKNKKKQFNQFIVEEGQGNAEKLQKRA 183
SS D+ EKK K K +K K+R + ++ + KKK+ + E + +K K+A
Sbjct: 30 SSDGDDDGGEKK-EKRKKMKKEKERKGVPEDADTEMKKKERKEKETFEPEQKKKKKDKKA 88
Score = 26.2 bits (55), Expect = 4.2
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +1
Query: 13 SSDEVEEKKPSKGKSRQKVKDRLSLDQNKYGKNKKKQFNQFIVEEGQGNAEKL 171
SSD + K K K +Q+ S D K +KK+ + ++ + ++E L
Sbjct: 166 SSDSEKRLKKEKNKEKQRDSSESSSDSEDDRKRRKKKVKKDKKQKAKDSSESL 218
>SB_17956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1449
Score = 26.2 bits (55), Expect = 4.2
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 34 KKPSKGKSRQKVKDRLSLDQNKYGK 108
K P +G+ ++K D SLD N+Y K
Sbjct: 53 KNPGQGEEKKKEIDEESLDPNQYFK 77
>SB_37029| Best HMM Match : 7tm_1 (HMM E-Value=4.2039e-45)
Length = 1102
Score = 26.2 bits (55), Expect = 4.2
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 22 EVEEKKPSKGKSRQKVKDRLSLDQNKYGKNKKKQFN 129
E+ +KP + K ++K K + + K K KKK+ N
Sbjct: 362 ELRIRKPVRSKKKKKKKKKKKKKKKKKKKKKKKKKN 397
>SB_32355| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 1358
Score = 26.2 bits (55), Expect = 4.2
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 22 EVEEKKPSKGKSRQKVKDRLSLDQNKYGKNKKKQFN 129
E+ +KP + K ++K K + + K K KKK+ N
Sbjct: 57 ELRIRKPVRSKKKKKKKKKKKKKKKKKKKKKKKKKN 92
>SB_19195| Best HMM Match : LEA_4 (HMM E-Value=0.00053)
Length = 1152
Score = 26.2 bits (55), Expect = 4.2
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +1
Query: 16 SDEVEEKKPSKGKSRQKVKDRLS 84
S EEKKPSK +S+ K+ D S
Sbjct: 1128 SPVAEEKKPSKKQSKHKLLDETS 1150
>SB_49223| Best HMM Match : DUF310 (HMM E-Value=5.7)
Length = 181
Score = 25.8 bits (54), Expect = 5.6
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +1
Query: 43 SKGKSRQKVKDRLSLDQNKYGKNKKKQFNQFIVEEGQGN 159
+KGK + K +++L N G + ++++ F+ EG+ N
Sbjct: 9 AKGKDEKPDKLKVNLLLNCAGADAIEEYSHFVFNEGESN 47
>SB_35970| Best HMM Match : DUF310 (HMM E-Value=9.4)
Length = 207
Score = 25.8 bits (54), Expect = 5.6
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +1
Query: 43 SKGKSRQKVKDRLSLDQNKYGKNKKKQFNQFIVEEGQGN 159
+KGK + K +++L N G + ++++ F+ EG+ N
Sbjct: 36 AKGKDEKPDKLKVNLLLNCAGADAIEEYSHFVFNEGESN 74
>SB_29972| Best HMM Match : zf-CCHC (HMM E-Value=9.3e-05)
Length = 285
Score = 25.8 bits (54), Expect = 5.6
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +1
Query: 43 SKGKSRQKVKDRLSLDQNKYGKNKKKQFNQFIVEEGQGN 159
+KGK + K +++L N G + ++++ F+ EG+ N
Sbjct: 9 AKGKDEKPDKLKVNLLLNCAGADAIEEYSHFVFNEGESN 47
>SB_26233| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 463
Score = 25.8 bits (54), Expect = 5.6
Identities = 15/61 (24%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Frame = +1
Query: 19 DEVEEKKPSK----GKSRQKVKDRLSLDQNKYGKNKKKQFNQFIVEEGQGNAEKLQKRAE 186
+E E KK K K ++++K+R ++ + KK++ Q +E + E++Q+ E
Sbjct: 284 EEAERKKQEKLEKLAKKKEELKERKRQEKLEQKAKKKEKERQEREKEKEREKERIQQEKE 343
Query: 187 R 189
+
Sbjct: 344 K 344
>SB_22016| Best HMM Match : HSP90 (HMM E-Value=0)
Length = 581
Score = 25.8 bits (54), Expect = 5.6
Identities = 14/57 (24%), Positives = 27/57 (47%)
Frame = +1
Query: 7 STSSDEVEEKKPSKGKSRQKVKDRLSLDQNKYGKNKKKQFNQFIVEEGQGNAEKLQK 177
S +E EEKK + + KD+ ++ ++KK + + ++E E+L K
Sbjct: 167 SDDEEEEEEKKDEEEEEEDGDKDKPKIEDMDEDEDKKDKKKKKTIKEKYTEMEELNK 223
>SB_9953| Best HMM Match : VWA (HMM E-Value=0)
Length = 1034
Score = 25.8 bits (54), Expect = 5.6
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +1
Query: 43 SKGKSRQKVKDRLSLDQNKYGKNKKKQFNQFIVEEGQGN 159
+KGK + K +++L N G + ++++ F+ EG+ N
Sbjct: 364 AKGKDEKPDKLKVNLLLNCAGADAIEEYSHFVFNEGESN 402
>SB_59670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 25.8 bits (54), Expect = 5.6
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +1
Query: 43 SKGKSRQKVKDRLSLDQNKYGKNKKKQFNQFIVEEGQGN 159
+KGK + K +++L N G + ++++ F+ EG+ N
Sbjct: 101 AKGKDEKPDKLKVNLLLNCAGADAIEEYSHFVFNEGESN 139
>SB_54200| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 996
Score = 25.8 bits (54), Expect = 5.6
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = +1
Query: 22 EVEEKKPSKGKSRQKVKDRLSLDQNKYGKNKKKQFNQFIVEEGQGNAEKLQKRAERFAGG 201
E +E+K K K+ + K ++K GK+K+ + E+G + E +++ E+ G
Sbjct: 802 EGKERKDEKDKNGEDGKGEDKDKEDKKGKDKEDNEKEQKEEKGDKDGEGKERKDEKDKNG 861
>SB_47642| Best HMM Match : RVT_1 (HMM E-Value=6.7e-21)
Length = 1336
Score = 25.8 bits (54), Expect = 5.6
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +1
Query: 43 SKGKSRQKVKDRLSLDQNKYGKNKKKQFNQFIVEEGQGN 159
+KGK + K +++L N G + ++++ F+ EG+ N
Sbjct: 36 AKGKDEKPDKLKVNLLLNCAGADAIEEYSHFVFNEGESN 74
>SB_41747| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 605
Score = 25.8 bits (54), Expect = 5.6
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +1
Query: 43 SKGKSRQKVKDRLSLDQNKYGKNKKKQFNQFIVEEGQGN 159
+KGK + K +++L N G + ++++ F+ EG+ N
Sbjct: 36 AKGKDEKPDKLKVNLLLNCAGADAIEEYSHFVFNEGESN 74
>SB_35395| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 126
Score = 25.8 bits (54), Expect = 5.6
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +1
Query: 43 SKGKSRQKVKDRLSLDQNKYGKNKKKQFNQFIVEEGQGN 159
+KGK + K +++L N G + ++++ F+ EG+ N
Sbjct: 36 AKGKDEKPDKLKVNLLLNCAGADAIEEYSHFVFNEGESN 74
>SB_31976| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 126
Score = 25.8 bits (54), Expect = 5.6
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +1
Query: 43 SKGKSRQKVKDRLSLDQNKYGKNKKKQFNQFIVEEGQGN 159
+KGK + K +++L N G + ++++ F+ EG+ N
Sbjct: 36 AKGKDEKPDKLKVNLLLNCAGADAIEEYSHFVFNEGESN 74
>SB_27795| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 126
Score = 25.8 bits (54), Expect = 5.6
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +1
Query: 43 SKGKSRQKVKDRLSLDQNKYGKNKKKQFNQFIVEEGQGN 159
+KGK + K +++L N G + ++++ F+ EG+ N
Sbjct: 36 AKGKDEKPDKLKVNLLLNCAGADAIEEYSHFVFNEGESN 74
>SB_27045| Best HMM Match : zf-CCHC (HMM E-Value=9.3e-05)
Length = 388
Score = 25.8 bits (54), Expect = 5.6
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +1
Query: 43 SKGKSRQKVKDRLSLDQNKYGKNKKKQFNQFIVEEGQGN 159
+KGK + K +++L N G + ++++ F+ EG+ N
Sbjct: 36 AKGKDEKPDKLKVNLLLNCAGADAIEEYSHFVFNEGESN 74
>SB_19477| Best HMM Match : GST_C (HMM E-Value=0.64)
Length = 1294
Score = 25.8 bits (54), Expect = 5.6
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +1
Query: 43 SKGKSRQKVKDRLSLDQNKYGKNKKKQFNQFIVEEGQGN 159
+KGK + K +++L N G + ++++ F+ EG+ N
Sbjct: 1204 AKGKDEKPDKLKVNLLLNCAGADAIEEYSHFVFNEGESN 1242
>SB_14037| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 126
Score = 25.8 bits (54), Expect = 5.6
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +1
Query: 43 SKGKSRQKVKDRLSLDQNKYGKNKKKQFNQFIVEEGQGN 159
+KGK + K +++L N G + ++++ F+ EG+ N
Sbjct: 36 AKGKDEKPDKLKVNLLLNCAGADAIEEYSHFVFNEGESN 74
>SB_10467| Best HMM Match : zf-PARP (HMM E-Value=5.6e-35)
Length = 1311
Score = 25.8 bits (54), Expect = 5.6
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +1
Query: 43 SKGKSRQKVKDRLSLDQNKYGKNKKKQFNQFIVEEGQGN 159
+KGK + K +++L N G + ++++ F+ EG+ N
Sbjct: 339 AKGKDEKPDKLKVNLLLNCAGADAIEEYSHFVFNEGESN 377
>SB_9010| Best HMM Match : RVP (HMM E-Value=0.14)
Length = 711
Score = 25.8 bits (54), Expect = 5.6
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +1
Query: 43 SKGKSRQKVKDRLSLDQNKYGKNKKKQFNQFIVEEGQGN 159
+KGK + K +++L N G + ++++ F+ EG+ N
Sbjct: 299 AKGKDEKPDKLKVNLLLNCAGADAIEEYSHFVFNEGESN 337
>SB_1676| Best HMM Match : zf-CCHC (HMM E-Value=9.3e-05)
Length = 390
Score = 25.8 bits (54), Expect = 5.6
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +1
Query: 43 SKGKSRQKVKDRLSLDQNKYGKNKKKQFNQFIVEEGQGN 159
+KGK + K +++L N G + ++++ F+ EG+ N
Sbjct: 36 AKGKDEKPDKLKVNLLLNCAGADAIEEYSHFVFNEGESN 74
>SB_33336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 309
Score = 25.4 bits (53), Expect = 7.4
Identities = 14/53 (26%), Positives = 27/53 (50%)
Frame = +1
Query: 10 TSSDEVEEKKPSKGKSRQKVKDRLSLDQNKYGKNKKKQFNQFIVEEGQGNAEK 168
T +D++E+K ++ QK K + N + +KK+ N +E G++ K
Sbjct: 197 TENDQLEDKTTQTTETPQKPKQHDVAETNVNTRRRKKE-NARFKDEATGSSRK 248
>SB_19444| Best HMM Match : zf-C3HC4 (HMM E-Value=0.011)
Length = 434
Score = 25.4 bits (53), Expect = 7.4
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +1
Query: 10 TSSDEVEEKKPSKGKS--RQKVKDRLSLDQNKYGKNKKKQFNQFIVEEGQGNAEKLQKR 180
T+ +EKK K +++K R+S QN+ KNK K + E Q EKL+ R
Sbjct: 340 TTEQIFQEKKVVKKLQVDEEEIKHRISELQNQLAKNKSK------LSETQERCEKLEIR 392
>SB_39225| Best HMM Match : NIF (HMM E-Value=0)
Length = 1772
Score = 25.0 bits (52), Expect = 9.7
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +1
Query: 4 SSTSSDEVEEKKPSKGKSRQKVKDRLSLDQNKYGKNKKKQ 123
S + ++ ++ P K K R KD+ S N + K +KK+
Sbjct: 1690 SGSDGEDSADENPPKKKRRSAEKDQDSELDNIFTKKRKKE 1729
>SB_32762| Best HMM Match : Extensin_2 (HMM E-Value=0.062)
Length = 830
Score = 25.0 bits (52), Expect = 9.7
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +1
Query: 31 EKKPSKGKSRQKVKDRLSLDQNKYGKNKKKQFNQFIVEEGQGNAEKLQKRAE 186
E+ GKS+QK K++ ++ K + KK + E+G G ++ + ++E
Sbjct: 588 EEMMKGGKSKQKEKEKRAVHSAKLEYDSKK-----VEEKGSGKSQATKMKSE 634
>SB_20744| Best HMM Match : CH (HMM E-Value=0.92)
Length = 1103
Score = 25.0 bits (52), Expect = 9.7
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +1
Query: 40 PSKGKSRQKVKDRLSLDQNKYGKNKKKQFNQFIVEEGQGNAEKL 171
P K K + R K G + KK +Q +VEE + EKL
Sbjct: 887 PHTAKEMWKRQSRHLSRLTKTGSDVKKTKSQRLVEEAEARQEKL 930
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.304 0.122 0.320
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,346,802
Number of Sequences: 59808
Number of extensions: 78203
Number of successful extensions: 259
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 236
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 258
length of database: 16,821,457
effective HSP length: 52
effective length of database: 13,711,441
effective search space used: 301651702
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)
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