Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_J20
         (225 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   0.46 
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    21   2.5  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    21   2.5  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    19   7.5  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    19   7.5  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    19   7.5  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     19   7.5  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    19   7.5  

>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 23.0 bits (47), Expect = 0.46
 Identities = 11/39 (28%), Positives = 17/39 (43%)
 Frame = +1

Query: 52  KSRQKVKDRLSLDQNKYGKNKKKQFNQFIVEEGQGNAEK 168
           +S  +    L   +  Y K+  +QF Q+I E      EK
Sbjct: 371 ESENRRNSCLGSTETYYSKHNTQQFTQYIPESSSNLQEK 409



 Score = 19.8 bits (39), Expect = 4.3
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 17  VMKLRKKNPLKVNHVRKLKTGYHWT 91
           V++L+     K +  RKL+   HWT
Sbjct: 439 VVELQPVKSSKSSGWRKLRNIVHWT 463


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 20.6 bits (41), Expect = 2.5
 Identities = 4/6 (66%), Positives = 5/6 (83%)
 Frame = +3

Query: 192 CWWSMC 209
           CWW +C
Sbjct: 489 CWWKIC 494


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 20.6 bits (41), Expect = 2.5
 Identities = 4/6 (66%), Positives = 5/6 (83%)
 Frame = +3

Query: 192 CWWSMC 209
           CWW +C
Sbjct: 542 CWWKIC 547


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 19.0 bits (37), Expect = 7.5
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +2

Query: 32  KKNPLKVNHVRKLKTGYHWT 91
           KK P K +  RKL+   HWT
Sbjct: 211 KKIP-KSSGWRKLRNIVHWT 229


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 19.0 bits (37), Expect = 7.5
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 41  GFFSSTSSLDV 9
           GF S T++LDV
Sbjct: 168 GFMSGTATLDV 178


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 19.0 bits (37), Expect = 7.5
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +2

Query: 155 EMLKNFKRELKDLLVE 202
           +++ N K+E+ D+L E
Sbjct: 564 KLIDNIKKEIYDILPE 579


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 19.0 bits (37), Expect = 7.5
 Identities = 5/8 (62%), Positives = 6/8 (75%)
 Frame = -3

Query: 112 YFYHIYFG 89
           Y YH+Y G
Sbjct: 125 YIYHLYMG 132


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 19.0 bits (37), Expect = 7.5
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 41  GFFSSTSSLDV 9
           GF S T++LDV
Sbjct: 168 GFMSGTATLDV 178


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.304    0.122    0.320 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,442
Number of Sequences: 438
Number of extensions: 716
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used:  3533460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (18.8 bits)