Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_J19
         (231 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    22   1.1  
DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein ...    21   2.0  
AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein ...    21   2.0  

>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.8 bits (44), Expect = 1.1
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +1

Query: 4   KHAGEPALRLHMARSRNDQSATDTKLWML 90
           K  GE A+  +  R+    +ATD +LW +
Sbjct: 163 KVLGELAILYNCKRTATITAATDCQLWAI 191


>DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein 2
           protein.
          Length = 117

 Score = 21.0 bits (42), Expect = 2.0
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +1

Query: 187 SHLQRAQPIRWS 222
           SH+QR  P  WS
Sbjct: 96  SHIQRTYPKEWS 107


>AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein
           protein.
          Length = 117

 Score = 21.0 bits (42), Expect = 2.0
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +1

Query: 187 SHLQRAQPIRWS 222
           SH+QR  P  WS
Sbjct: 96  SHIQRTYPKEWS 107


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,270
Number of Sequences: 438
Number of extensions: 1182
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used:  3785850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)