Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_J19
(231 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g10920.1 68418.m01267 argininosuccinate lyase, putative / arg... 72 6e-14
At4g18200.1 68417.m02705 purine permease family protein similar ... 29 0.55
At5g25220.1 68418.m02990 homeobox protein knotted-1 like 3 (KNAT... 27 1.3
At3g22200.1 68416.m02801 4-aminobutyrate aminotransferase / gamm... 27 1.3
At4g33240.1 68417.m04731 phosphatidylinositol-4-phosphate 5-kina... 26 2.9
At5g15130.1 68418.m01773 WRKY family transcription factor contai... 26 3.9
At2g03260.1 68415.m00279 EXS family protein / ERD1/XPR1/SYG1 fam... 26 3.9
At1g26730.1 68414.m03255 EXS family protein / ERD1/XPR1/SYG1 fam... 26 3.9
At1g35350.1 68414.m04383 EXS family protein / ERD1/XPR1/SYG1 fam... 25 5.1
At1g04300.1 68414.m00421 meprin and TRAF homology domain-contain... 25 5.1
At5g37460.1 68418.m04508 hypothetical protein contains Pfam PF04... 25 6.7
At4g02020.1 68417.m00272 zeste-like protein 1 (EZA1) identical t... 25 6.7
At3g47170.1 68416.m05122 transferase family protein low similari... 25 6.7
At2g34750.1 68415.m04267 RNA polymerase I specific transcription... 25 6.7
At2g14610.1 68415.m01643 pathogenesis-related protein 1 (PR-1) i... 25 6.7
At2g14580.1 68415.m01633 pathogenesis-related protein, putative ... 25 6.7
At2g10970.1 68415.m01172 invertase/pectin methylesterase inhibit... 25 6.7
At1g60570.1 68414.m06819 kelch repeat-containing F-box family pr... 25 6.7
At5g63100.1 68418.m07922 expressed protein 25 8.9
At1g72020.1 68414.m08325 expressed protein 25 8.9
>At5g10920.1 68418.m01267 argininosuccinate lyase, putative /
arginosuccinase, putative similar to argininosuccinate
lyase [Nostoc punctiforme] GI:7672743; contains Pfam
profile PF00206: Lyase
Length = 517
Score = 71.7 bits (168), Expect = 6e-14
Identities = 35/73 (47%), Positives = 46/73 (63%)
Frame = +1
Query: 13 GEPALRLHMARSRNDQSATDTKLWMLASLPSLHKALRELIEVLVVRAKNEIDIIFPGFSH 192
GEPA +LH ARSRNDQ ATD +LW ++ ++ +R L LV A +I PG++H
Sbjct: 153 GEPAKKLHTARSRNDQVATDFRLWCRDAIDTIIVKIRNLQRALVELALKNEALIVPGYTH 212
Query: 193 LQRAQPIRWSHFL 231
LQRAQP+ H L
Sbjct: 213 LQRAQPVLLPHVL 225
>At4g18200.1 68417.m02705 purine permease family protein similar to
purine permease [Arabidopsis thaliana] GI:7620007;
contains Pfam profile PF03151: Domain of unknown
function, DUF250
Length = 1128
Score = 28.7 bits (61), Expect = 0.55
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +2
Query: 35 TWREVATINRLQTQNYGCWRRYPVYTKHLEN*SKF*WYVLKMKLILF 175
T E+ + + Q++NY W R +Y + EN K W ++LI F
Sbjct: 51 TTMEIESSSVPQSKNYKKWLRISIYVVYYENGGKSTWMGTLVQLIGF 97
>At5g25220.1 68418.m02990 homeobox protein knotted-1 like 3 (KNAT3)
identical to homeobox protein knotted-1 like 3 (KNAT3)
SP:P48000 from [Arabidopsis thaliana]
Length = 431
Score = 27.5 bits (58), Expect = 1.3
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -1
Query: 231 QEMTPTNWLSTLQV*KSRENNINFI 157
QE P NWL+T + +S +NN NF+
Sbjct: 40 QEAPPPNWLNTALL-RSSDNNNNFL 63
>At3g22200.1 68416.m02801 4-aminobutyrate aminotransferase /
gamma-amino-N-butyrate transaminase / GABA transaminase
/ beta-alanine--oxoglutarate aminotransferase identical
to gamma-aminobutyrate transaminase subunit precursor
[Arabidopsis thaliana] (EC 2.6.1.19) GI:14030435;
contains Pfam profile PF00202: aminotransferase, class
III; identical to cDNA gamma-aminobutyrate transaminase
subunit precursor, nuclear gene for mitochondrial
product GI:14030434
Length = 504
Score = 27.5 bits (58), Expect = 1.3
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -2
Query: 173 IISISFLARTTKTSINSLSALCRLGNDASIHSFVSVA 63
I S+ LARTT+ ++S A C GN S F + A
Sbjct: 4 INSLRRLARTTQVHLHSKYATCMSGNSTSRRIFTTEA 40
>At4g33240.1 68417.m04731 phosphatidylinositol-4-phosphate 5-kinase
family protein similar to SP|Q9Z1T6 FYVE
finger-containing phosphoinositide kinase (EC 2.7.1.68)
(1- phosphatidylinositol-4-phosphate kinase) (PIP5K)
(PtdIns(4)P-5-kinase) {Mus musculus}; contains Pfam
profiles PF01504: Phosphatidylinositol-4-phosphate
5-Kinase, PF01363: FYVE zinc finger, PF00118: TCP-1/cpn60
chaperonin family
Length = 1756
Score = 26.2 bits (55), Expect = 2.9
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 98 YPVYTKHLEN*SKF*WYVLKMKLILFSRDF 187
Y V +KHL+ +F VL M+ +LF R+F
Sbjct: 1553 YQVSSKHLKGGKEFKMDVLVMENLLFKRNF 1582
>At5g15130.1 68418.m01773 WRKY family transcription factor contains
Pfam profile: PF03106 WRKY DNA -binding domain; TMV
response-related gene product, Nicotiana tabacum,
EMBL:AB024510
Length = 548
Score = 25.8 bits (54), Expect = 3.9
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +1
Query: 49 RNDQSATDTKLWMLASLPSLHKALRELIEVLVVRAKNEIDIIFPGFS 189
+N QS T+T L S PS H + I + V + E I+ P S
Sbjct: 432 QNSQSLTETLTKALTSDPSFHSVIAAAISTM-VGSNGEQQIVGPRHS 477
>At2g03260.1 68415.m00279 EXS family protein / ERD1/XPR1/SYG1 family
protein similar to PHO1 protein [Arabidopsis thaliana]
GI:20069032; contains Pfam profiles PF03105: SPX domain,
PF03124: EXS family
Length = 807
Score = 25.8 bits (54), Expect = 3.9
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = +2
Query: 26 FVYTWREVATINRLQTQNYGCWRRYPVYTKHLEN*SKF 139
F++ +A + L+ G W + V +HL N KF
Sbjct: 750 FLHKQTTLAVVASLEIMRRGMWNFFRVENEHLNNVGKF 787
>At1g26730.1 68414.m03255 EXS family protein / ERD1/XPR1/SYG1 family
protein similar to PHO1 protein [Arabidopsis thaliana]
GI:20069032; contains Pfam profiles PF03105: SPX domain,
PF03124: EXS family
Length = 750
Score = 25.8 bits (54), Expect = 3.9
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +2
Query: 17 NLLFVYTWREVATINRLQTQNYGCWRRYPVYTKHLEN*SKF 139
NL F++ +A + L+ G W + + +HL N KF
Sbjct: 690 NLSFLHRETMIALLAALEIIRRGIWNFFRLENEHLNNVGKF 730
>At1g35350.1 68414.m04383 EXS family protein / ERD1/XPR1/SYG1 family
protein similar to PHO1 protein [Arabidopsis thaliana]
GI:20069032; contains Pfam profiles PF03105: SPX domain,
PF03124: EXS family
Length = 747
Score = 25.4 bits (53), Expect = 5.1
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +2
Query: 17 NLLFVYTWREVATINRLQTQNYGCWRRYPVYTKHLEN*SKF 139
N+ F++ VA I L+ G W + + +HL N KF
Sbjct: 687 NISFLHRETMVALIAILEIIRRGIWNFFRLENEHLNNVGKF 727
>At1g04300.1 68414.m00421 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein weak similarity
to ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471;contains Pfam PF00917: Meprin And
TRAF-Homology (MATH) domain
Length = 1052
Score = 25.4 bits (53), Expect = 5.1
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -2
Query: 170 ISISFLARTTKTSINSLSALCRLGNDASIHS 78
I++S +TT + S+S+ RLG D S+H+
Sbjct: 778 ITVSSSVQTTTSLPRSVSSAGRLGPDPSLHN 808
>At5g37460.1 68418.m04508 hypothetical protein contains Pfam PF04510
: Family of unknown function (DUF577)); common family
comprised of At5g37410, At5g37400, At5g37920,
At5g37460, At5g37650, At5g37470, At5g37420, At5g37430
Length = 622
Score = 25.0 bits (52), Expect = 6.7
Identities = 15/61 (24%), Positives = 27/61 (44%)
Frame = +1
Query: 1 YKHAGEPALRLHMARSRNDQSATDTKLWMLASLPSLHKALRELIEVLVVRAKNEIDIIFP 180
Y+H+ +R H ++ A + S +LH+ +IE L ++ E D+ F
Sbjct: 63 YRHSSNDVIRFHSLYLLSETLAVFRNCNIKLSRVALHEIKPLVIECLTMQETKESDMKFL 122
Query: 181 G 183
G
Sbjct: 123 G 123
>At4g02020.1 68417.m00272 zeste-like protein 1 (EZA1) identical to
enhancer of zeste-like protein 1(EZA1) (GI:4185507)
[Arabidopsis thaliana]; similar to polycomb group
[Arabidopsis thaliana] GI:1903019 (curly leaf); contains
Pfam profile PF00856: SET domain
Length = 856
Score = 25.0 bits (52), Expect = 6.7
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = +1
Query: 34 HMARSRNDQSATDTKLWMLASLPSLHKAL 120
+++ + +A+DTK+ + S+PSL +AL
Sbjct: 396 NLSNKKQKTAASDTKMSFVNSVPSLDQAL 424
>At3g47170.1 68416.m05122 transferase family protein low similarity
to 10-deacetylbaccatin III-10-O-acetyl transferase Taxus
cuspidata GI:6746554; contains Pfam profile PF02458
transferase family
Length = 468
Score = 25.0 bits (52), Expect = 6.7
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -2
Query: 128 NSLSALCRLGNDASIHSFVSV 66
N +S LC+LGND + V V
Sbjct: 212 NQISTLCKLGNDKNNPKLVDV 232
>At2g34750.1 68415.m04267 RNA polymerase I specific transcription
initiation factor RRN3 family protein contains Pfam
PF05327: RNA polymerase I specific transcription
initiation factor RRN3; similar to RRN3 (GI:7670100)
[Homo sapiens] similar to RNA polymerase I specific
transcription initiation factor RRN3 (Swiss-Prot:P36070)
[Saccharomyces cerevisiae]
Length = 613
Score = 25.0 bits (52), Expect = 6.7
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 179 GKIISISFLARTTKTSINSLSALCRLGND 93
GK + +SF+A K I+ CR ND
Sbjct: 387 GKFLPVSFVASMLKRLIDECVGYCRTCND 415
>At2g14610.1 68415.m01643 pathogenesis-related protein 1 (PR-1)
identical to GB:M90508 SP|P33154
Length = 161
Score = 25.0 bits (52), Expect = 6.7
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2
Query: 215 RIG*ARCRCENPGKIISISF 156
R+G A+ RC N G IIS ++
Sbjct: 130 RLGCAKVRCNNGGTIISCNY 149
>At2g14580.1 68415.m01633 pathogenesis-related protein, putative
similar to SP|P33154 Pathogenesis-related protein 1
precursor (PR-1) {Arabidopsis thaliana}; contains Pfam
profile PF00188: SCP-like extracellular protein
Length = 161
Score = 25.0 bits (52), Expect = 6.7
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2
Query: 215 RIG*ARCRCENPGKIISISF 156
R+G A+ RC N G IIS ++
Sbjct: 130 RLGCAKVRCNNGGTIISCNY 149
>At2g10970.1 68415.m01172 invertase/pectin methylesterase inhibitor
family protein contains Pfam profile PF04043: Plant
invertase/pectin methylesterase inhibitor
Length = 194
Score = 25.0 bits (52), Expect = 6.7
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 9 CRGTCSSSTHGEKSQRSIGYRHKTMDAGVVTQ 104
C+GT S S+ E+ +S+ H+T A V +
Sbjct: 55 CKGTASFSSLEEECIKSLTLDHRTKSASTVLE 86
>At1g60570.1 68414.m06819 kelch repeat-containing F-box family
protein low similarity to SKP1 interacting partner 6
[Arabidopsis thaliana] GI:10716957; contains Pfam
profiles PF01344: Kelch motif, PF00646: F-box domain
Length = 381
Score = 25.0 bits (52), Expect = 6.7
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Frame = -2
Query: 182 PGKIISISFLARTTKTSINSLSALCR----LGNDASIHSFVSVAD*SLRLLAMCRR 27
P ++I +S LAR ++ S SLS +C+ L I+ F S++ + L +C R
Sbjct: 26 PEELI-LSILARVSRLSYRSLSLVCKRFHSLLTSGEIYRFRSLSGYTENCLYVCLR 80
>At5g63100.1 68418.m07922 expressed protein
Length = 329
Score = 24.6 bits (51), Expect = 8.9
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -2
Query: 188 ENPGKIISISFLARTTKTS 132
+NPG I SISFL +T S
Sbjct: 100 DNPGNIHSISFLLKTLTDS 118
>At1g72020.1 68414.m08325 expressed protein
Length = 97
Score = 24.6 bits (51), Expect = 8.9
Identities = 10/41 (24%), Positives = 22/41 (53%)
Frame = +2
Query: 56 INRLQTQNYGCWRRYPVYTKHLEN*SKF*WYVLKMKLILFS 178
+ ++ +G + Y ++ KH+ N + + LKM L +F+
Sbjct: 34 VKKMSGGGHGGYDEYYLHAKHMYNLDRMKYQALKMSLGVFT 74
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,170,446
Number of Sequences: 28952
Number of extensions: 84322
Number of successful extensions: 242
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 242
length of database: 12,070,560
effective HSP length: 56
effective length of database: 10,449,248
effective search space used: 208984960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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