Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_J18
(334 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17A2.11 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 31 0.061
SPBP4G3.02 |pho1||acid phosphatase Pho1 |Schizosaccharomyces pom... 27 0.99
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 26 1.7
SPAC222.15 |meu13|SPAC821.01|Tat binding protein 1|Schizosacchar... 25 4.0
SPAC1687.13c |csn5||COP9/signalosome complex subunit Csn5|Schizo... 25 4.0
SPAC19A8.03 |||phosphatidylinositol-3-phosphatase |Schizosacchar... 25 4.0
SPCC18.04 |pof6||F-box protein Pof6|Schizosaccharomyces pombe|ch... 24 5.3
SPAC24H6.06 |sld3|mug175|DNA replication pre-initiation complex ... 24 7.0
SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase Ubp7|Schizosa... 24 7.0
SPAC6F12.12 |par2|pbp2|protein phosphatase regulatory subunit Pa... 23 9.2
SPAC1142.01 ||SPAC17G6.18|DUF654 family protein|Schizosaccharomy... 23 9.2
>SPAC17A2.11 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 217
Score = 30.7 bits (66), Expect = 0.061
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2
Query: 257 FINFFMYFLMFILSHFLYHI 316
FINFF+ + ILSH L+HI
Sbjct: 154 FINFFLLYHQIILSHSLFHI 173
>SPBP4G3.02 |pho1||acid phosphatase Pho1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 453
Score = 26.6 bits (56), Expect = 0.99
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +3
Query: 6 LQQ*YSYCNVF-FLRFINIKHEFH*NYFVGCRLRLRYGDRFGGAVGILLGIGKSWAENER 182
LQ +C +F + F+N ++E ++ G +++G FGGA L EN
Sbjct: 262 LQDYSEFCKLFNSVDFLNFEYEGDLSFSYGMGNSVKWGSIFGGAYANSLANSLRSVENNT 321
Query: 183 SQ 188
Q
Sbjct: 322 QQ 323
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 25.8 bits (54), Expect = 1.7
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +3
Query: 207 PSLQWPRPRLWLKENNH 257
PS++W PR WLK +
Sbjct: 192 PSVKWRMPRFWLKRRTN 208
>SPAC222.15 |meu13|SPAC821.01|Tat binding protein
1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 216
Score = 24.6 bits (51), Expect = 4.0
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +2
Query: 110 LWGPFRRRRGNPSRNWKKLGRE*EKPV 190
LW NP + W+KLG E E P+
Sbjct: 187 LWHLITDSLENPKQLWEKLGFETEGPI 213
>SPAC1687.13c |csn5||COP9/signalosome complex subunit
Csn5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 299
Score = 24.6 bits (51), Expect = 4.0
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1
Query: 292 YKHEKIHKKVNE*LFSFSQSRGLGHCS 212
Y H K KKV E L + + SR + CS
Sbjct: 214 YFHSKAEKKVTEFLRNRNWSRSITECS 240
>SPAC19A8.03 |||phosphatidylinositol-3-phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 559
Score = 24.6 bits (51), Expect = 4.0
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -1
Query: 244 FSQSRGLGHCSDGWTST 194
F + L HCSDGW T
Sbjct: 333 FRHAHVLVHCSDGWDRT 349
>SPCC18.04 |pof6||F-box protein Pof6|Schizosaccharomyces pombe|chr
3|||Manual
Length = 872
Score = 24.2 bits (50), Expect = 5.3
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +3
Query: 246 ENNHSLTFLCIFSCLYYHIFCIIYTYYS 329
E H F +F CL +I+ I+T S
Sbjct: 19 ERRHKQQFKALFGCLTINIYLKIFTLIS 46
>SPAC24H6.06 |sld3|mug175|DNA replication pre-initiation complex
subunit Sld3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 668
Score = 23.8 bits (49), Expect = 7.0
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = -2
Query: 189 TGFSHSRPNFFQFLEGFPRRRRN-GPHSEDASDNQQNNF 76
T HS + + E RRR N G HS SD+ N F
Sbjct: 466 TSSPHSEASISKDYEILKRRRSNSGVHSLTRSDSSFNGF 504
>SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase
Ubp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 875
Score = 23.8 bits (49), Expect = 7.0
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -2
Query: 117 PHSEDASDNQQNNFSEIHV 61
P+S + SDN+QNN + V
Sbjct: 365 PNSHNTSDNEQNNEDYVSV 383
>SPAC6F12.12 |par2|pbp2|protein phosphatase regulatory subunit
Par2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 627
Score = 23.4 bits (48), Expect = 9.2
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -2
Query: 291 INMRKYIKKLMNDYF 247
+N+R YI+K MN+ F
Sbjct: 374 LNLRSYIRKSMNNVF 388
>SPAC1142.01 ||SPAC17G6.18|DUF654 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 667
Score = 23.4 bits (48), Expect = 9.2
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
Frame = +3
Query: 171 ENERSQS*VLVQPSLQWP---RPRLWLKENNHSLTFLCIF 281
+N R + VLVQP WP R L +K S C F
Sbjct: 217 DNLRRKRHVLVQPQEGWPPLVRSGLGMKLTGQSQDLECFF 256
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,383,231
Number of Sequences: 5004
Number of extensions: 25765
Number of successful extensions: 77
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 77
length of database: 2,362,478
effective HSP length: 64
effective length of database: 2,042,222
effective search space used: 93942212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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