Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_J18
         (334 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64598-2|AAK39214.2|  558|Caenorhabditis elegans Hypothetical pr...    28   1.4  
Z92830-12|CAE17777.1|  191|Caenorhabditis elegans Hypothetical p...    27   4.3  
U88310-1|AAB42340.1|  663|Caenorhabditis elegans Hypothetical pr...    26   5.7  
U70852-4|AAK29816.2|   93|Caenorhabditis elegans Hypothetical pr...    26   5.7  
AF016449-13|AAG24003.1|  350|Caenorhabditis elegans Serpentine r...    26   5.7  
Z80344-6|CAB02486.3|   82|Caenorhabditis elegans Hypothetical pr...    25   10.0 
Z67990-6|CAA91937.1|  199|Caenorhabditis elegans Hypothetical pr...    25   10.0 
U80842-17|AAB37953.1|  155|Caenorhabditis elegans Hypothetical p...    25   10.0 
U80448-7|AAB37820.1|  260|Caenorhabditis elegans Hypothetical pr...    25   10.0 
U67957-1|AAB07587.2|  324|Caenorhabditis elegans Hypothetical pr...    25   10.0 
U41557-8|AAA83308.2|  229|Caenorhabditis elegans Hypothetical pr...    25   10.0 
U41557-7|AAQ01534.1|  381|Caenorhabditis elegans Hypothetical pr...    25   10.0 
AF000198-9|AAB53057.4|  684|Caenorhabditis elegans Hypothetical ...    25   10.0 

>U64598-2|AAK39214.2|  558|Caenorhabditis elegans Hypothetical
           protein C52B9.4 protein.
          Length = 558

 Score = 28.3 bits (60), Expect = 1.4
 Identities = 16/61 (26%), Positives = 29/61 (47%)
 Frame = +3

Query: 141 ILLGIGKSWAENERSQS*VLVQPSLQWPRPRLWLKENNHSLTFLCIFSCLYYHIFCIIYT 320
           I+  +GKS+  +  S + V +  S+QW  P  +L   +  L       C++Y    +I+ 
Sbjct: 177 IIKVVGKSFPSSPNSNTNVTI--SVQWKAPYGYLSAIDWPLLRFYKIMCVFYSALALIWV 234

Query: 321 Y 323
           Y
Sbjct: 235 Y 235


>Z92830-12|CAE17777.1|  191|Caenorhabditis elegans Hypothetical
           protein F11A5.15 protein.
          Length = 191

 Score = 26.6 bits (56), Expect = 4.3
 Identities = 11/47 (23%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
 Frame = +3

Query: 195 VLVQPSLQWPRPRLWLKENNHSLTFLCIFSCLYY---HIFCIIYTYY 326
           V V   + W    +W+ + +  +T   +F C ++    +FCI+ + Y
Sbjct: 118 VAVITGIIWTSKEIWINQCDPLITISVLFFCAFFILIFLFCILGSIY 164


>U88310-1|AAB42340.1|  663|Caenorhabditis elegans Hypothetical
           protein C24G7.4 protein.
          Length = 663

 Score = 26.2 bits (55), Expect = 5.7
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -1

Query: 223 GHCSDGWTSTYDWLLSFSA 167
           G+CS+ W   Y+  LS+SA
Sbjct: 330 GNCSENWPEGYNTFLSYSA 348


>U70852-4|AAK29816.2|   93|Caenorhabditis elegans Hypothetical
           protein F45E4.5 protein.
          Length = 93

 Score = 26.2 bits (55), Expect = 5.7
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +1

Query: 199 WSSRRYSGPGHGF 237
           W   RYS PGHGF
Sbjct: 40  WGRPRYSPPGHGF 52


>AF016449-13|AAG24003.1|  350|Caenorhabditis elegans Serpentine
           receptor, class t protein8 protein.
          Length = 350

 Score = 26.2 bits (55), Expect = 5.7
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = +3

Query: 234 LWLKENNHSLTFLCIFSCLYYHIFCIIYTY 323
           +WL +    + F  +  C+++ I C IY +
Sbjct: 231 IWLYKTRRQIIFQALMLCVFHGIVCGIYEF 260


>Z80344-6|CAB02486.3|   82|Caenorhabditis elegans Hypothetical
           protein F15D4.3 protein.
          Length = 82

 Score = 25.4 bits (53), Expect = 10.0
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = +3

Query: 84  FVGCRLRLRYGDRFGGAVGILLG 152
           F   R+ L  G   GGA GILLG
Sbjct: 19  FTKIRMGLMMGAMIGGATGILLG 41


>Z67990-6|CAA91937.1|  199|Caenorhabditis elegans Hypothetical
           protein F02D10.6 protein.
          Length = 199

 Score = 25.4 bits (53), Expect = 10.0
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +2

Query: 260 INFFMYFLMFILSHFLYHIYLLFLI 334
           +NF +Y   F L H  Y++Y+L+ +
Sbjct: 67  LNFAIYRAGFRLLHMCYNVYILYTL 91


>U80842-17|AAB37953.1|  155|Caenorhabditis elegans Hypothetical
           protein ZC239.16 protein.
          Length = 155

 Score = 25.4 bits (53), Expect = 10.0
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = +1

Query: 268 FYVFSHVYIITFFVSYIPII 327
           F+VFS ++++  FV Y+P +
Sbjct: 121 FFVFSIIFLVLVFVYYMPAL 140


>U80448-7|AAB37820.1|  260|Caenorhabditis elegans Hypothetical
           protein F59A3.7 protein.
          Length = 260

 Score = 25.4 bits (53), Expect = 10.0
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = +1

Query: 19  IHIVTYFF*DLLILNMNFTKIILLVVACVFAM 114
           +H +  FF  ++++ M+F  +I+L   C F +
Sbjct: 128 LHSIFQFFISIILIRMSFWYVIVLTHICHFEL 159


>U67957-1|AAB07587.2|  324|Caenorhabditis elegans Hypothetical
           protein K02H8.1 protein.
          Length = 324

 Score = 25.4 bits (53), Expect = 10.0
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -3

Query: 143 DSHGAAETVPIAKTQATTNKIILVKFMFNINKS 45
           ++  AA T P+A + A T    LV  +FN+  S
Sbjct: 4   ENSNAAGTTPVASSLAATPNANLVSQVFNVKDS 36


>U41557-8|AAA83308.2|  229|Caenorhabditis elegans Hypothetical
           protein C50F7.1a protein.
          Length = 229

 Score = 25.4 bits (53), Expect = 10.0
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = +3

Query: 231 RLWLKENNHSLTFLCIFSCLYYHIFCIIYTYY 326
           R+ L+     LT + +F+C +  ++C I+TY+
Sbjct: 84  RVKLRVATMMLTVIIVFACCWLPLYC-IFTYF 114


>U41557-7|AAQ01534.1|  381|Caenorhabditis elegans Hypothetical
           protein C50F7.1b protein.
          Length = 381

 Score = 25.4 bits (53), Expect = 10.0
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = +3

Query: 231 RLWLKENNHSLTFLCIFSCLYYHIFCIIYTYY 326
           R+ L+     LT + +F+C +  ++C I+TY+
Sbjct: 236 RVKLRVATMMLTVIIVFACCWLPLYC-IFTYF 266


>AF000198-9|AAB53057.4|  684|Caenorhabditis elegans Hypothetical
           protein T28F2.7 protein.
          Length = 684

 Score = 25.4 bits (53), Expect = 10.0
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -1

Query: 235 SRGLGHCSDGWTSTYDWLLSFSAQL 161
           S   G+CSD W   YD+   +++ +
Sbjct: 357 SNAWGNCSDSWPRGYDYSFPYTSAM 381


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,483,679
Number of Sequences: 27780
Number of extensions: 140991
Number of successful extensions: 614
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 614
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 408121444
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)