Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_J18
         (334 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    21   3.0  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    20   6.8  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            20   9.1  

>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 3.0
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -2

Query: 96  DNQQNNFSEIHV*Y**ILKKIRYNMNII 13
           +N  NN++  +  Y    KK+ YN+N I
Sbjct: 331 NNNYNNYNNYNNNYNNNYKKLYYNINYI 358


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -2

Query: 129 RRNGPHSEDASDNQQNN 79
           +RNG    D  +NQ +N
Sbjct: 514 KRNGNRQNDNQNNQNDN 530


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 19.8 bits (39), Expect = 9.1
 Identities = 5/11 (45%), Positives = 7/11 (63%)
 Frame = -1

Query: 217 CSDGWTSTYDW 185
           CS+GW   + W
Sbjct: 374 CSNGWICEHRW 384


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,050
Number of Sequences: 438
Number of extensions: 2470
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7466580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)