Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_J16
         (445 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    25   0.37 
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   1.5  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      22   2.6  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   8.0  

>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 25.0 bits (52), Expect = 0.37
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +1

Query: 358 ISGVLRQYYNDDA 396
           + G+ RQ+YNDDA
Sbjct: 221 LKGIARQFYNDDA 233


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +1

Query: 130 YIICVVLYNILRSWI 174
           Y++C V YN + +W+
Sbjct: 59  YVVCDVAYNNVNNWL 73


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 355 RISGVLRQYYNDDAESWAWVRAAVRGG 435
           R+SG+ +Q    D +  + VRA   GG
Sbjct: 111 RVSGLTQQADQTDRDELSHVRALAAGG 137


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 8/33 (24%), Positives = 13/33 (39%)
 Frame = -3

Query: 290 PATTRGAGDCSPTSISPQHHTNQHYTTIYQIHH 192
           P    G     PT   P HH +    ++  +H+
Sbjct: 334 PHHQHGNHTMGPTMGPPHHHHHHQTQSLQHLHY 366


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,990
Number of Sequences: 438
Number of extensions: 2686
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11574126
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)