Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_J14
         (626 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   1.6  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    23   2.8  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    22   3.7  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   6.4  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 14/45 (31%), Positives = 18/45 (40%)
 Frame = -1

Query: 473  SPTLFIENSHGTPASNLSFDKKICTKYIKYILCNAKTVTLPSPSI 339
            S  + +  S   PA   SFD    T Y + +      V LP P I
Sbjct: 1294 SKKVTVSPSASVPAKIASFDDTFTTTYKEDVTLPCLAVGLPPPVI 1338


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 139 PFSHSASVLLFHSFCKFF 86
           PF+ S  VL F+  C F+
Sbjct: 274 PFTQSPGVLGFNEICSFY 291


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 534 VCERGCRPQQFAGVRGAP 481
           VCER   P+ F GV+ +P
Sbjct: 44  VCERFLAPKGFGGVQISP 61


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -2

Query: 91  FFFHTVMWSVLTS 53
           FFFH+ M SVL S
Sbjct: 98  FFFHSFMTSVLFS 110


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,410
Number of Sequences: 336
Number of extensions: 2929
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)