Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_J14
(626 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF542797-1|ABQ18300.1| 1494|Homo sapiens methyl-CpG binding doma... 31 2.5
BC150264-1|AAI50265.1| 1494|Homo sapiens methyl-CpG binding doma... 31 2.5
AB040894-1|BAA95985.1| 1498|Homo sapiens KIAA1461 protein protein. 31 2.5
BC022228-1|AAH22228.1| 429|Homo sapiens C2orf30 protein protein. 31 3.3
BC013129-1|AAH13129.1| 483|Homo sapiens chromosome 2 open readi... 31 3.3
AY453410-1|AAR26725.1| 483|Homo sapiens XTP3-transactivated pro... 31 3.3
AY358717-1|AAQ89079.1| 429|Homo sapiens CL25084 protein. 31 3.3
AK001913-1|BAA91974.1| 483|Homo sapiens protein ( Homo sapiens ... 31 3.3
AC007883-3|AAY24352.1| 483|Homo sapiens unknown protein. 31 3.3
>EF542797-1|ABQ18300.1| 1494|Homo sapiens methyl-CpG binding domain
protein 5 protein.
Length = 1494
Score = 31.5 bits (68), Expect = 2.5
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Frame = -1
Query: 539 DRCVSEAVGR-NSSRGFGALLSLS-PTLFIENSHGTPASNLSFDKKICTKYIKYI-LCNA 369
+RC R SRGFG LLS + L +E +P+S+ S + + YI Y NA
Sbjct: 1285 ERCAHINGNRPRQSRGFGELLSTAKQDLVLEEQ--SPSSSNSLENSLVKDYIHYNGDFNA 1342
Query: 368 KTVT--LPSPSIVQS 330
K+V +PSPS +S
Sbjct: 1343 KSVNGCVPSPSDAKS 1357
>BC150264-1|AAI50265.1| 1494|Homo sapiens methyl-CpG binding domain
protein 5 protein.
Length = 1494
Score = 31.5 bits (68), Expect = 2.5
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Frame = -1
Query: 539 DRCVSEAVGR-NSSRGFGALLSLS-PTLFIENSHGTPASNLSFDKKICTKYIKYI-LCNA 369
+RC R SRGFG LLS + L +E +P+S+ S + + YI Y NA
Sbjct: 1285 ERCAHINGNRPRQSRGFGELLSTAKQDLVLEEQ--SPSSSNSLENSLVKDYIHYNGDFNA 1342
Query: 368 KTVT--LPSPSIVQS 330
K+V +PSPS +S
Sbjct: 1343 KSVNGCVPSPSDAKS 1357
>AB040894-1|BAA95985.1| 1498|Homo sapiens KIAA1461 protein protein.
Length = 1498
Score = 31.5 bits (68), Expect = 2.5
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Frame = -1
Query: 539 DRCVSEAVGR-NSSRGFGALLSLS-PTLFIENSHGTPASNLSFDKKICTKYIKYI-LCNA 369
+RC R SRGFG LLS + L +E +P+S+ S + + YI Y NA
Sbjct: 1289 ERCAHINGNRPRQSRGFGELLSTAKQDLVLEEQ--SPSSSNSLENSLVKDYIHYNGDFNA 1346
Query: 368 KTVT--LPSPSIVQS 330
K+V +PSPS +S
Sbjct: 1347 KSVNGCVPSPSDAKS 1361
>BC022228-1|AAH22228.1| 429|Homo sapiens C2orf30 protein protein.
Length = 429
Score = 31.1 bits (67), Expect = 3.3
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = +1
Query: 394 YFVQIFLSKDKLDAGVPCEFSMKRVGERERSAPNPRELLRPTASLTHLSYHYYS 555
Y + K+K +P S E++ PNPRELL P + SY S
Sbjct: 66 YVIMTTAHKEKYKCILPLVTSGDEEEEKDYKGPNPRELLEPLFKQSSCSYRIES 119
>BC013129-1|AAH13129.1| 483|Homo sapiens chromosome 2 open reading
frame 30 protein.
Length = 483
Score = 31.1 bits (67), Expect = 3.3
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = +1
Query: 394 YFVQIFLSKDKLDAGVPCEFSMKRVGERERSAPNPRELLRPTASLTHLSYHYYS 555
Y + K+K +P S E++ PNPRELL P + SY S
Sbjct: 66 YVIMTTAHKEKYKCILPLVTSGDEEEEKDYKGPNPRELLEPLFKQSSCSYRIES 119
>AY453410-1|AAR26725.1| 483|Homo sapiens XTP3-transactivated
protein B protein.
Length = 483
Score = 31.1 bits (67), Expect = 3.3
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = +1
Query: 394 YFVQIFLSKDKLDAGVPCEFSMKRVGERERSAPNPRELLRPTASLTHLSYHYYS 555
Y + K+K +P S E++ PNPRELL P + SY S
Sbjct: 66 YVIMTTAHKEKYKCILPLVTSGDEEEEKDYKGPNPRELLEPLFKQSSCSYRIES 119
>AY358717-1|AAQ89079.1| 429|Homo sapiens CL25084 protein.
Length = 429
Score = 31.1 bits (67), Expect = 3.3
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = +1
Query: 394 YFVQIFLSKDKLDAGVPCEFSMKRVGERERSAPNPRELLRPTASLTHLSYHYYS 555
Y + K+K +P S E++ PNPRELL P + SY S
Sbjct: 66 YVIMTTAHKEKYKCILPLVTSGDEEEEKDYKGPNPRELLEPLFKQSSCSYRIES 119
>AK001913-1|BAA91974.1| 483|Homo sapiens protein ( Homo sapiens
cDNA FLJ11051 fis, clone PLACE1004629, weakly similar to
PROTEIN OS-9 PRECURSOR. ).
Length = 483
Score = 31.1 bits (67), Expect = 3.3
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = +1
Query: 394 YFVQIFLSKDKLDAGVPCEFSMKRVGERERSAPNPRELLRPTASLTHLSYHYYS 555
Y + K+K +P S E++ PNPRELL P + SY S
Sbjct: 66 YVIMTTAHKEKYKCILPLVTSGDEEEEKDYKGPNPRELLEPLFKQSSCSYRIES 119
>AC007883-3|AAY24352.1| 483|Homo sapiens unknown protein.
Length = 483
Score = 31.1 bits (67), Expect = 3.3
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = +1
Query: 394 YFVQIFLSKDKLDAGVPCEFSMKRVGERERSAPNPRELLRPTASLTHLSYHYYS 555
Y + K+K +P S E++ PNPRELL P + SY S
Sbjct: 66 YVIMTTAHKEKYKCILPLVTSGDEEEEKDYKGPNPRELLEPLFKQSSCSYRIES 119
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,352,546
Number of Sequences: 237096
Number of extensions: 1633556
Number of successful extensions: 2882
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2882
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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