Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_J14
         (626 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   3.2  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   3.2  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   3.2  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   5.6  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -1

Query: 473 SPTLFIENSHGTPASNLSFDKK 408
           SPT+  E +HGT A++  + K+
Sbjct: 643 SPTVLEELTHGTLAASTLYSKR 664


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -1

Query: 473 SPTLFIENSHGTPASNLSFDKK 408
           SPT+  E +HGT A++  + K+
Sbjct: 643 SPTVLEELTHGTLAASTLYSKR 664


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -1

Query: 473 SPTLFIENSHGTPASNLSFDKK 408
           SPT+  E +HGT A++  + K+
Sbjct: 643 SPTVLEELTHGTLAASTLYSKR 664


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = -1

Query: 437  PASNLSFDKKICTKYIKYILCNAKTVTLPSPSI 339
            PA   SFD K    Y + +      V +P+P +
Sbjct: 1276 PAKIASFDDKFTATYKEDVKLPCLAVGVPAPEV 1308


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,339
Number of Sequences: 438
Number of extensions: 3328
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18704709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)