Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_J13
         (569 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   2.4  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   3.2  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   9.8  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   9.8  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 16/62 (25%), Positives = 25/62 (40%)
 Frame = +3

Query: 297 LLVGVNSRYVLVEEPGYYIEQYEDQPEQWANSRVRRQAGALTVNSDGTSGAMVKVPITGN 476
           +L  +N+     E P   +   E QP Q   S   + +   T +S        K P +GN
Sbjct: 378 ILNAINAALKSDEIPPEPVPTPEPQPTQTTESEPTQASEQPTESSTTQKPQTTKTPESGN 437

Query: 477 EN 482
           E+
Sbjct: 438 ES 439


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +2

Query: 383 GQLQGAPASGCTNCQL 430
           G LQG P SGC  C+L
Sbjct: 305 GLLQGDPLSGCL-CEL 319


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 8/34 (23%), Positives = 19/34 (55%)
 Frame = -1

Query: 551 SRCSGSQLHLVSEIYGAKGTEPVIFVSSYRYLDH 450
           ++   S + L++    A  T P++ ++ Y+ LD+
Sbjct: 183 TKTRASLICLLAWFIAALFTSPMLVIAEYKQLDY 216


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -2

Query: 481 FSFPVIGTLTIAPEVPSELTVSAPAC 404
           F+F V+G  T    +  +  V+ P C
Sbjct: 643 FAFTVVGAATTYITIIYQFQVNKPTC 668


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,820
Number of Sequences: 336
Number of extensions: 2394
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14099535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)