Samia BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_J13
         (569 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0004 + 39265-39440,39545-39652,41955-43528,43650-43996,440...    29   3.4  
01_06_0996 + 33667663-33667900,33668019-33668091,33668785-336688...    29   3.4  
03_02_0731 - 10786122-10787018,10787859-10788449,10788659-107887...    28   4.6  
02_05_0359 - 28269236-28269541,28270857-28270919,28271439-282714...    28   4.6  
07_01_0476 - 3593555-3594253,3594684-3594850,3594866-3594964,359...    28   6.0  
03_02_0798 - 11321590-11321685,11321802-11321888,11321972-113220...    28   6.0  

>08_01_0004 + 39265-39440,39545-39652,41955-43528,43650-43996,
            44090-44322,45308-45412,45531-45705,46443-46658
          Length = 977

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = +3

Query: 300  LVGVNSRYVLVEEPGYYIEQYEDQPEQWANSRVRRQAGALTVNSDGTSGAMVKV 461
            L G+ SR V    P + ++ Y D+ EQW   R R  +  L ++ + + G+  +V
Sbjct: 886  LTGLGSRIV---SPVFGLQSYSDKGEQWFQLR-RPDSKQLQIDGESSKGSRAEV 935


>01_06_0996 +
           33667663-33667900,33668019-33668091,33668785-33668841,
           33668970-33669067,33669482-33669637,33669744-33670366,
           33670484-33670560,33671551-33671805,33671950-33672067,
           33672174-33672345,33672434-33672975
          Length = 802

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = +1

Query: 298 FWSASTA-GTCSLKSLVTTLNNMRISRSSGPT 390
           FW  ST    CS   L+  LNN  +SR +GP+
Sbjct: 40  FWPRSTKWALCSEVDLIGPLNNWTLSRLTGPS 71


>03_02_0731 -
           10786122-10787018,10787859-10788449,10788659-10788740,
           10789914-10790107
          Length = 587

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 11/40 (27%), Positives = 23/40 (57%)
 Frame = -2

Query: 133 CVTLHLGALKLCFRLRHKTVIMILVNPWFLNIYEEKSQLI 14
           CV + L A  + F L H +  +++V+  F ++ E+  ++I
Sbjct: 119 CVNIRLNAPTVAFLLEHSSAEVVMVDQEFFSLAEDSLRII 158


>02_05_0359 -
           28269236-28269541,28270857-28270919,28271439-28271459,
           28271660-28271716,28271789-28271874,28271982-28272039,
           28272176-28272311,28272799-28273073,28273564-28273602,
           28274052-28274143,28274422-28274454,28275041-28275088,
           28275191-28275323
          Length = 448

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -3

Query: 405 AGAPWSWPTAPADPHIVQCSNQALQRARTG 316
           AG PW+W  +PA   + +C   A +R  TG
Sbjct: 408 AGGPWTWRESPASRAMQKC--PACKRTHTG 435


>07_01_0476 -
           3593555-3594253,3594684-3594850,3594866-3594964,
           3595620-3595806,3595880-3595948,3596551-3596752,
           3597124-3597362,3598374-3598637
          Length = 641

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +2

Query: 389 LQGAPASGCTNCQLRRHLRCYGQGTYN 469
           L G P  G  N  +  +LRCYG  +Y+
Sbjct: 302 LNGVPGCGFLNHAINLYLRCYGSLSYH 328


>03_02_0798 -
           11321590-11321685,11321802-11321888,11321972-11322082,
           11322169-11322515,11322570-11322612,11322669-11322749,
           11323321-11323596,11325277-11325552
          Length = 438

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -3

Query: 411 PLAGAPWSWPTAPADPHIVQCSNQALQR 328
           PL+GAP   P AP  P  + C   AL +
Sbjct: 15  PLSGAPRRRPAAPTRPSALVCGTYALTK 42


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,346,800
Number of Sequences: 37544
Number of extensions: 277010
Number of successful extensions: 745
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 745
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1317005676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)