Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_J10
(448 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q07020 Cluster: 60S ribosomal protein L18; n=124; Eukar... 172 3e-42
UniRef50_O65729 Cluster: 60S ribosomal protein L18; n=17; Eukary... 145 4e-34
UniRef50_P07279 Cluster: 60S ribosomal protein L18; n=5; Dikarya... 144 8e-34
UniRef50_UPI0000E4A07F Cluster: PREDICTED: similar to ribosomal ... 134 1e-30
UniRef50_Q4N438 Cluster: 60S ribosomal protein L18; n=8; Eukaryo... 130 1e-29
UniRef50_UPI0000498BAB Cluster: 60S ribosomal protein L18; n=1; ... 121 6e-27
UniRef50_Q4QG98 Cluster: 60S ribosomal protein L18; n=8; Trypano... 118 4e-26
UniRef50_Q7RPR6 Cluster: Eukaryotic ribosomal protein L18, putat... 116 3e-25
UniRef50_A0BXY7 Cluster: Chromosome undetermined scaffold_135, w... 114 7e-25
UniRef50_Q7QQK8 Cluster: Ribosomal protein L18; n=1; Giardia lam... 111 9e-24
UniRef50_A0ED68 Cluster: Chromosome undetermined scaffold_9, who... 104 8e-22
UniRef50_A4D0W6 Cluster: Similar to ribosomal protein L18; 60S r... 98 7e-20
UniRef50_UPI000050E205 Cluster: 60S ribosomal subunit protein L1... 83 2e-15
UniRef50_UPI0000F2DC1A Cluster: PREDICTED: similar to ribosomal ... 82 5e-15
UniRef50_UPI000155D3ED Cluster: PREDICTED: similar to ribosomal ... 71 2e-11
UniRef50_A7Q837 Cluster: Chromosome undetermined scaffold_62, wh... 69 5e-11
UniRef50_A5BN99 Cluster: Putative uncharacterized protein; n=1; ... 69 5e-11
UniRef50_Q98RU3 Cluster: 60s ribosomal protein L18; n=1; Guillar... 53 3e-06
UniRef50_Q8ZYQ2 Cluster: 50S ribosomal protein L18e; n=7; Thermo... 40 0.032
UniRef50_A0RXP6 Cluster: Ribosomal protein L18E; n=2; Thermoprot... 39 0.057
UniRef50_A6UW02 Cluster: 50S ribosomal protein L15; n=1; Methano... 37 0.23
UniRef50_Q2Q0G4 Cluster: Ribosomal protein L18E; n=1; uncultured... 34 1.6
UniRef50_Q8TVB7 Cluster: 50S ribosomal protein L18e; n=12; Archa... 34 1.6
UniRef50_A5UN56 Cluster: 50S ribosomal protein L15; n=2; Methano... 33 2.1
UniRef50_UPI0000DA3F07 Cluster: PREDICTED: similar to 60S riboso... 33 2.8
UniRef50_Q06035 Cluster: Gag,protease,endonuclease, reverse tran... 33 3.7
UniRef50_Q2GZD3 Cluster: Putative uncharacterized protein; n=1; ... 33 3.7
UniRef50_Q8PW46 Cluster: 50S ribosomal protein L18e; n=16; Eurya... 33 3.7
UniRef50_Q1K398 Cluster: Hydroxyacylglutathione hydrolase; n=1; ... 31 8.6
>UniRef50_Q07020 Cluster: 60S ribosomal protein L18; n=124;
Eukaryota|Rep: 60S ribosomal protein L18 - Homo sapiens
(Human)
Length = 188
Score = 172 bits (418), Expect = 3e-42
Identities = 86/149 (57%), Positives = 103/149 (69%)
Frame = +2
Query: 2 DINHKHDRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRPPISL 181
DI H DRKVRR E KSQD+ TN+ FNQ++L+RLFMSR NRPP+SL
Sbjct: 4 DIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLSL 63
Query: 182 SRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGEILTF 361
SR+ R MK P RE AVVVGT+++DVR+ VPK+ V AL VT +AR+RIL AGG+ILTF
Sbjct: 64 SRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILTF 123
Query: 362 DQLALRAPTGRKTVLVQGRRNAREAVRHF 448
DQLAL +P G TVL+ G R RE RHF
Sbjct: 124 DQLALDSPKGCGTVLLSGPRKGREVYRHF 152
>UniRef50_O65729 Cluster: 60S ribosomal protein L18; n=17;
Eukaryota|Rep: 60S ribosomal protein L18 - Cicer
arietinum (Chickpea) (Garbanzo)
Length = 183
Score = 145 bits (351), Expect = 4e-34
Identities = 75/143 (52%), Positives = 99/143 (69%)
Frame = +2
Query: 20 DRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRPPISLSRLARH 199
++K +RT KS D+ T++ FN +IL+RLFMS++NRPP+SLSRL ++
Sbjct: 8 NKKTKRTSPKSNDIYLKLLVKLYRFLVRRTDSNFNAVILKRLFMSKVNRPPLSLSRLIKY 67
Query: 200 MKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGEILTFDQLALR 379
M+ +EG I VVVG V++D+R+Y VP + V AL TE ARARI AGGE LTFDQLALR
Sbjct: 68 MQG--KEGKIGVVVGAVTDDIRVYDVPTIKVTALKFTETARARIQKAGGECLTFDQLALR 125
Query: 380 APTGRKTVLVQGRRNAREAVRHF 448
P TVL++G +NAREAV+HF
Sbjct: 126 LPL-TDTVLLRGPKNAREAVKHF 147
>UniRef50_P07279 Cluster: 60S ribosomal protein L18; n=5;
Dikarya|Rep: 60S ribosomal protein L18 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 186
Score = 144 bits (349), Expect = 8e-34
Identities = 70/145 (48%), Positives = 98/145 (67%)
Frame = +2
Query: 14 KHDRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRPPISLSRLA 193
+H R RT KS +V T+A FN+++L+ LF+S+INRPP+S+SR+A
Sbjct: 9 QHKRSGHRTAPKSDNVYLKLLVKLYTFLARRTDAPFNKVVLKALFLSKINRPPVSVSRIA 68
Query: 194 RHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGEILTFDQLA 373
R +K+ VVVGTV++D R++ PK TVAAL T ARA+I+ AGGE +T DQLA
Sbjct: 69 RALKQEGAANKTVVVVGTVTDDARIFEFPKTTVAALRFTAGARAKIVKAGGECITLDQLA 128
Query: 374 LRAPTGRKTVLVQGRRNAREAVRHF 448
+RAP G+ T++++G RN+REAVRHF
Sbjct: 129 VRAPKGQNTLILRGPRNSREAVRHF 153
>UniRef50_UPI0000E4A07F Cluster: PREDICTED: similar to ribosomal
protein L18, partial; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ribosomal protein
L18, partial - Strongylocentrotus purpuratus
Length = 354
Score = 134 bits (323), Expect = 1e-30
Identities = 63/112 (56%), Positives = 87/112 (77%)
Frame = +2
Query: 107 TNAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKM 286
TNAKFN I+L+RLFMSR N+ +SL+R+ R M K REG AVVVG +++DVR++ +PK+
Sbjct: 9 TNAKFNNIVLKRLFMSRSNKAAMSLARVVRFMNKDGREGKTAVVVGCITDDVRIHKLPKL 68
Query: 287 TVAALHVTEKARARILAAGGEILTFDQLALRAPTGRKTVLVQGRRNAREAVR 442
+ AL VT +ARARI+ AGGEI+TFDQLAL++P G+ TVL+QG ++ + R
Sbjct: 69 KICALRVTARARARIIKAGGEIITFDQLALQSPKGQNTVLMQGFKSETDMER 120
>UniRef50_Q4N438 Cluster: 60S ribosomal protein L18; n=8;
Eukaryota|Rep: 60S ribosomal protein L18 - Theileria
parva
Length = 184
Score = 130 bits (314), Expect = 1e-29
Identities = 64/114 (56%), Positives = 86/114 (75%)
Frame = +2
Query: 107 TNAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKM 286
T+ FN+++L+RL M R + P+SLS+L++HM+K R AVVVGTV+ND R+ VPK+
Sbjct: 40 TDHSFNKVVLKRLLMPRRFKAPLSLSKLSKHMEK--RPDNTAVVVGTVTNDERMDVVPKL 97
Query: 287 TVAALHVTEKARARILAAGGEILTFDQLALRAPTGRKTVLVQGRRNAREAVRHF 448
+V AL VTE AR RILA+GGE+LTFDQL R+PTG + L++G AREAV+HF
Sbjct: 98 SVCALRVTETARKRILASGGEVLTFDQLVARSPTGSRCTLLRGATKAREAVKHF 151
>UniRef50_UPI0000498BAB Cluster: 60S ribosomal protein L18; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L18 - Entamoeba histolytica HM-1:IMSS
Length = 168
Score = 121 bits (292), Expect = 6e-27
Identities = 69/149 (46%), Positives = 89/149 (59%)
Frame = +2
Query: 2 DINHKHDRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRPPISL 181
D++ H RK + + T +KF + IL RL +SR+NRP +S
Sbjct: 4 DLDRHHVRKHVSKTARGNNAYMKLLVRLYGFLARRTQSKFAKTILHRLCLSRVNRPIVST 63
Query: 182 SRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGEILTF 361
S+LA MKK E AV V TV+ D R Y VPKM V AL T+ A A I AGG+ L F
Sbjct: 64 SKLACLMKKHPEE--TAVCVNTVTYDSR-YPVPKMNVCALKFTKTAEAAITKAGGKCLRF 120
Query: 362 DQLALRAPTGRKTVLVQGRRNAREAVRHF 448
D+LAL+APTGRKTVL++G+RN REA++HF
Sbjct: 121 DELALKAPTGRKTVLIRGKRNVREALKHF 149
>UniRef50_Q4QG98 Cluster: 60S ribosomal protein L18; n=8;
Trypanosomatidae|Rep: 60S ribosomal protein L18 -
Leishmania major
Length = 198
Score = 118 bits (285), Expect = 4e-26
Identities = 62/120 (51%), Positives = 85/120 (70%), Gaps = 6/120 (5%)
Frame = +2
Query: 107 TNAKFNQIILRRLFMSRINRPPISLSRLARHMKKP------TREGLIAVVVGTVSNDVRL 268
T++ FN+++ +RL SR NR PISLSR+A MK+ ++ IAVVVG V +DVR+
Sbjct: 40 TSSGFNKVVYQRLIKSRSNRAPISLSRIAVVMKRKAVFTAKSKAAPIAVVVGDVLDDVRM 99
Query: 269 YTVPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGRKTVLVQGRRNAREAVRHF 448
+P M V AL ++ AR I+AAGGE LTFDQLA+ APTG+ T L++GR++ RE+VRHF
Sbjct: 100 ARIPAMRVCALRFSKSARQSIVAAGGECLTFDQLAMIAPTGKNTYLLRGRKSGRESVRHF 159
>UniRef50_Q7RPR6 Cluster: Eukaryotic ribosomal protein L18,
putative; n=4; Plasmodium (Vinckeia)|Rep: Eukaryotic
ribosomal protein L18, putative - Plasmodium yoelii
yoelii
Length = 243
Score = 116 bits (278), Expect = 3e-25
Identities = 58/114 (50%), Positives = 79/114 (69%)
Frame = +2
Query: 107 TNAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKM 286
T+ FN+II +RL M + RPP+SLS+L +HM + +AVVVG++++D RL++ M
Sbjct: 96 TDVNFNKIIAKRLIMPKRFRPPLSLSKLQQHMSN--NQNSVAVVVGSITDDKRLFSCRNM 153
Query: 287 TVAALHVTEKARARILAAGGEILTFDQLALRAPTGRKTVLVQGRRNAREAVRHF 448
V AL TE AR RI+ AGGE LTFDQLALR PTG+ +L++G AR A +HF
Sbjct: 154 KVCALRFTETARKRIVDAGGECLTFDQLALRYPTGKDCILLRGPTKARTAEKHF 207
>UniRef50_A0BXY7 Cluster: Chromosome undetermined scaffold_135,
whole genome shotgun sequence; n=3; Eukaryota|Rep:
Chromosome undetermined scaffold_135, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 393
Score = 114 bits (275), Expect = 7e-25
Identities = 60/114 (52%), Positives = 80/114 (70%)
Frame = +2
Query: 107 TNAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKM 286
T+++FN +LRRL +R R PIS+SRL + + + VVVGTV++D RL TVPK+
Sbjct: 255 TDSQFNATVLRRLQSTRTARYPISVSRLVKQINTAKDKTRTLVVVGTVTDDARLLTVPKL 314
Query: 287 TVAALHVTEKARARILAAGGEILTFDQLALRAPTGRKTVLVQGRRNAREAVRHF 448
V AL TE AR RILAAGG+ LTFDQLA + PTG T+L++G + REA++HF
Sbjct: 315 NVCALRFTETARKRILAAGGKTLTFDQLAQQNPTGTGTILLRGPK-VREALKHF 367
>UniRef50_Q7QQK8 Cluster: Ribosomal protein L18; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein L18 - Giardia
lamblia ATCC 50803
Length = 179
Score = 111 bits (266), Expect = 9e-24
Identities = 61/142 (42%), Positives = 82/142 (57%)
Frame = +2
Query: 23 RKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRPPISLSRLARHM 202
RKV R E KS + T F +++ +RL +S+ NRP +S+SRLA M
Sbjct: 12 RKVERKEPKSPNPYIRLLHNAFKVVYENTGEDFTKVLTKRLCLSKTNRPVLSVSRLAHLM 71
Query: 203 KKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGEILTFDQLALRA 382
K RE IAVV TV+ND RL T+P+MT+ AL + AR+RI AGG ++FD+L
Sbjct: 72 HK--REDKIAVVASTVTNDERLVTIPRMTICALKFSATARSRIEKAGGRCMSFDELLAEK 129
Query: 383 PTGRKTVLVQGRRNAREAVRHF 448
PTG VL+QGRR+ R + F
Sbjct: 130 PTGDNCVLLQGRRSCRAVCKKF 151
>UniRef50_A0ED68 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=6; Eukaryota|Rep: Chromosome
undetermined scaffold_9, whole genome shotgun sequence -
Paramecium tetraurelia
Length = 469
Score = 104 bits (250), Expect = 8e-22
Identities = 59/114 (51%), Positives = 77/114 (67%)
Frame = +2
Query: 107 TNAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKM 286
T++ FN +LRRL +R R PIS+SRL + + + VVVGTV++DVRL TVPK+
Sbjct: 335 TDSNFNATVLRRLQQTRTARYPISVSRLVKQINTAKDKTRTLVVVGTVTDDVRLLTVPKI 394
Query: 287 TVAALHVTEKARARILAAGGEILTFDQLALRAPTGRKTVLVQGRRNAREAVRHF 448
V TE AR RILAAGG+ LTFDQLA + PTG T+L++G R RE ++HF
Sbjct: 395 KV----FTETARKRILAAGGKTLTFDQLAQQNPTGTGTILLRGPR-VREELKHF 443
>UniRef50_A4D0W6 Cluster: Similar to ribosomal protein L18; 60S
ribosomal protein L18; n=2; Homo sapiens|Rep: Similar to
ribosomal protein L18; 60S ribosomal protein L18 - Homo
sapiens (Human)
Length = 224
Score = 98.3 bits (234), Expect = 7e-20
Identities = 50/96 (52%), Positives = 65/96 (67%)
Frame = +2
Query: 161 NRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAA 340
N+PP+SLSR+ MK P +E AVVVGT+++DV + VPK+ V AL VT +AR+ I+
Sbjct: 93 NQPPLSLSRMIPKMKLPGQENKTAVVVGTITDDVWVQEVPKLKVCALGVTSRARSHIVRV 152
Query: 341 GGEILTFDQLALRAPTGRKTVLVQGRRNAREAVRHF 448
GG+ LTFDQLAL +P TVL+ G R RE HF
Sbjct: 153 GGKNLTFDQLALDSPKVCSTVLLSGPRKGREVYWHF 188
>UniRef50_UPI000050E205 Cluster: 60S ribosomal subunit protein L18;
n=1; Theileria annulata strain Ankara|Rep: 60S ribosomal
subunit protein L18 - Theileria annulata strain Ankara
Length = 222
Score = 83.4 bits (197), Expect = 2e-15
Identities = 39/65 (60%), Positives = 49/65 (75%)
Frame = +2
Query: 254 NDVRLYTVPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGRKTVLVQGRRNARE 433
+D R+ VPK++V AL VTE AR RILA+GGE+LTFDQL R+P G K L++G ARE
Sbjct: 125 DDERMDVVPKLSVCALRVTETARKRILASGGEVLTFDQLVARSPIGGKCTLLRGETKARE 184
Query: 434 AVRHF 448
AV+HF
Sbjct: 185 AVKHF 189
Score = 55.2 bits (127), Expect = 6e-07
Identities = 29/68 (42%), Positives = 45/68 (66%)
Frame = +2
Query: 107 TNAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKM 286
T+ FN+I+L+RL M R + P+SLS+L++HM+ +R AVV+GTV++ L +P
Sbjct: 40 TDFPFNKIVLKRLLMPRRYKAPLSLSKLSKHME--SRPNNTAVVIGTVTSTESLGMIPST 97
Query: 287 TVAALHVT 310
TV + VT
Sbjct: 98 TVTLVLVT 105
>UniRef50_UPI0000F2DC1A Cluster: PREDICTED: similar to ribosomal
protein L18; n=1; Monodelphis domestica|Rep: PREDICTED:
similar to ribosomal protein L18 - Monodelphis domestica
Length = 184
Score = 82.2 bits (194), Expect = 5e-15
Identities = 39/75 (52%), Positives = 54/75 (72%)
Frame = +2
Query: 167 PPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGG 346
PP+ LSR+ R MK E A V+GTV++++R+ VPK+ V+AL VT AR+RIL A G
Sbjct: 47 PPLPLSRMIRKMKLEGTENKTAAVMGTVTDNIRIQDVPKLKVSALRVTSNARSRILKANG 106
Query: 347 EILTFDQLALRAPTG 391
+IL+FDQLA+ +P G
Sbjct: 107 KILSFDQLAMTSPKG 121
>UniRef50_UPI000155D3ED Cluster: PREDICTED: similar to ribosomal
protein L18; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to ribosomal protein L18 -
Ornithorhynchus anatinus
Length = 188
Score = 70.5 bits (165), Expect = 2e-11
Identities = 32/63 (50%), Positives = 41/63 (65%)
Frame = +2
Query: 2 DINHKHDRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRPPISL 181
DI H DRKVRR E KSQD+ TN+ FN+++L+RLFMSR NRPP++L
Sbjct: 113 DIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSSFNKVVLKRLFMSRTNRPPLAL 172
Query: 182 SRL 190
SR+
Sbjct: 173 SRM 175
>UniRef50_A7Q837 Cluster: Chromosome undetermined scaffold_62, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_62, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 421
Score = 68.9 bits (161), Expect = 5e-11
Identities = 37/103 (35%), Positives = 58/103 (56%)
Frame = +2
Query: 23 RKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRPPISLSRLARHM 202
+K + T KS D+ T +KFN + L+R FMS++N+ P+ LSRL R M
Sbjct: 12 KKTKCTAPKSDDIYLKLTVKLYHFLVRKTGSKFNVVTLKRFFMSKVNKLPLLLSRLVRFM 71
Query: 203 KKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARI 331
++G I VV+G+V++D+R+Y V + V L T++ R I
Sbjct: 72 --DGKKGKIVVVIGSVTDDLRVYEVLYLKVTILRFTKRVREGI 112
>UniRef50_A5BN99 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 271
Score = 68.9 bits (161), Expect = 5e-11
Identities = 37/103 (35%), Positives = 58/103 (56%)
Frame = +2
Query: 23 RKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRPPISLSRLARHM 202
+K + T KS D+ T +KFN + L+R FMS++N+ P+ LSRL R M
Sbjct: 12 KKTKCTAPKSDDIYLKLTVKLYHFLVRKTGSKFNVVTLKRFFMSKVNKLPLLLSRLVRFM 71
Query: 203 KKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARI 331
++G I VV+G+V++D+R+Y V + V L T++ R I
Sbjct: 72 --DGKKGKIVVVIGSVTDDLRVYEVLYLKVTILRFTKRVREGI 112
>UniRef50_Q98RU3 Cluster: 60s ribosomal protein L18; n=1; Guillardia
theta|Rep: 60s ribosomal protein L18 - Guillardia theta
(Cryptomonas phi)
Length = 167
Score = 52.8 bits (121), Expect = 3e-06
Identities = 28/102 (27%), Positives = 56/102 (54%)
Frame = +2
Query: 116 KFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVA 295
KF + ++RR SR +R ISLS+L + K T + ++ V + ND R+ PK+ +
Sbjct: 67 KFLKELIRRTNSSRKSRSVISLSKLIKFSLKDTTKSILTV--SKILNDERISKTPKLKIF 124
Query: 296 ALHVTEKARARILAAGGEILTFDQLALRAPTGRKTVLVQGRR 421
AL+ + + +I+ GG+I +++ + K + ++G++
Sbjct: 125 ALNFSSSVKKKIIENGGQIFKLNEIKVDDFLNMKILFIRGKK 166
>UniRef50_Q8ZYQ2 Cluster: 50S ribosomal protein L18e; n=7;
Thermoprotei|Rep: 50S ribosomal protein L18e -
Pyrobaculum aerophilum
Length = 122
Score = 39.5 bits (88), Expect = 0.032
Identities = 21/64 (32%), Positives = 37/64 (57%)
Frame = +2
Query: 200 MKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGEILTFDQLALR 379
+ + +EG + VV G + +L K+ VAA+ ++ KA +++ AGGE+LT +L +
Sbjct: 54 LNRVAKEGDVVVVPGKLLAGGQLNK--KIIVAAVKISPKAARKVIEAGGEVLTIPELVRK 111
Query: 380 APTG 391
P G
Sbjct: 112 YPRG 115
>UniRef50_A0RXP6 Cluster: Ribosomal protein L18E; n=2;
Thermoprotei|Rep: Ribosomal protein L18E - Cenarchaeum
symbiosum
Length = 126
Score = 38.7 bits (86), Expect = 0.057
Identities = 24/82 (29%), Positives = 45/82 (54%)
Frame = +2
Query: 164 RPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAG 343
R ++L+++AR+ T+EG + VV G V + K+T+ ++ A ++L++G
Sbjct: 50 RRTLNLNKIARY----TKEGDVVVVPGRVLGTGSM--PHKITLCPFGISGAAAEKVLSSG 103
Query: 344 GEILTFDQLALRAPTGRKTVLV 409
G + F +L PTG+ VL+
Sbjct: 104 GRVTGFAELTKEFPTGKGVVLL 125
>UniRef50_A6UW02 Cluster: 50S ribosomal protein L15; n=1;
Methanococcus aeolicus Nankai-3|Rep: 50S ribosomal
protein L15 - Methanococcus aeolicus Nankai-3
Length = 120
Score = 36.7 bits (81), Expect = 0.23
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Frame = +2
Query: 122 NQIILRRLFMSRINRPPISLSRL-ARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAA 298
N + + + R+++P +S + + + T E + VV G V +L K+TVAA
Sbjct: 25 NDVKIWKDLAKRLSKPSRIISEVNVSRLNRYTEENHVVVVPGKVLGSGKL--AHKITVAA 82
Query: 299 LHVTEKARARILAAGGEILTFDQLALRAPTG 391
+E A+ + AGG +T +L P G
Sbjct: 83 FSFSEGAKKAVEEAGGRCITIKELINENPKG 113
>UniRef50_Q2Q0G4 Cluster: Ribosomal protein L18E; n=1; uncultured
organism HF70_19B12|Rep: Ribosomal protein L18E -
uncultured organism HF70_19B12
Length = 121
Score = 33.9 bits (74), Expect = 1.6
Identities = 31/96 (32%), Positives = 47/96 (48%)
Frame = +2
Query: 107 TNAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKM 286
T A + + RL SR N +LSRL+R + + ++G S DV +
Sbjct: 26 TGAALWRDVALRLETSRSNWAEPNLSRLSRTAGEDETILVPGKLLG--SGDV----IGSP 79
Query: 287 TVAALHVTEKARARILAAGGEILTFDQLALRAPTGR 394
+VAA V+ AR++I AAGG ++T L P G+
Sbjct: 80 SVAAYSVSAGARSKIEAAGGRVMTIRDLMNDNPNGK 115
>UniRef50_Q8TVB7 Cluster: 50S ribosomal protein L18e; n=12;
Archaea|Rep: 50S ribosomal protein L18e - Methanopyrus
kandleri
Length = 127
Score = 33.9 bits (74), Expect = 1.6
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
Frame = +2
Query: 110 NAKFNQIILRRLFMSRINRPPISLSRLARHMKKPT-REGLIAVVVGTVSNDVRLYTVPKM 286
NA + + RL R R +++ +L ++ +E +V G V D + T P +
Sbjct: 28 NAPVWRDVAERLSRPRRQRAEVNVGKLDGLARRGVIQEEETVLVPGKVLGD-GVITQP-L 85
Query: 287 TVAALHVTEKARARILAAGGEILTFDQLALRAPTG 391
VAA + AR +I AAGGE LT +L P G
Sbjct: 86 RVAAWRFSRTARMKIEAAGGECLTIRELLEENPEG 120
>UniRef50_A5UN56 Cluster: 50S ribosomal protein L15; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L15 -
Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM
861)
Length = 121
Score = 33.5 bits (73), Expect = 2.1
Identities = 27/94 (28%), Positives = 45/94 (47%)
Frame = +2
Query: 110 NAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMT 289
NA + + RL S ++LS +AR+ +V G V ++ L K+
Sbjct: 27 NAAIWKDVANRLGRSNRRTAEVNLSDIARYANADET----VLVPGKVLSNGDL--TEKVN 80
Query: 290 VAALHVTEKARARILAAGGEILTFDQLALRAPTG 391
VAA ++KA+ +I +AGGE ++ D + P G
Sbjct: 81 VAAFKFSQKAQEKIESAGGECVSIDDIMESNPKG 114
>UniRef50_UPI0000DA3F07 Cluster: PREDICTED: similar to 60S ribosomal
protein L18; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L18 - Rattus norvegicus
Length = 112
Score = 33.1 bits (72), Expect = 2.8
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +2
Query: 188 LARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAAL 301
+ + MK P E AVVVG V++DVR+ V ++ V AL
Sbjct: 1 MIQKMKLPGWENKTAVVVGMVTDDVRILEVHRLKVCAL 38
>UniRef50_Q06035 Cluster: Gag,protease,endonuclease, reverse
transcriptase,RNaseH; n=6; Volvox carteri|Rep:
Gag,protease,endonuclease, reverse transcriptase,RNaseH -
Volvox carteri
Length = 1462
Score = 32.7 bits (71), Expect = 3.7
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Frame = +2
Query: 116 KFNQIILRRLFMSRINRPPI--SLSRLARHMKKPTRE------GLIAVVVGTVSNDVRLY 271
+F ++I L++S RP I S+ LARHM KPT E G++ + GT + +
Sbjct: 1244 RFGELIGSLLYLSVGTRPDIAYSVGALARHMSKPTVEHWQAAKGVVRYIAGTAG--LGIV 1301
Query: 272 TVPKMTVAALH 304
PK + +LH
Sbjct: 1302 FSPKSSNPSLH 1312
>UniRef50_Q2GZD3 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 2471
Score = 32.7 bits (71), Expect = 3.7
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +2
Query: 212 TREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARIL 334
TRE + A VV + + Y VPK T+A+ TEKA ++L
Sbjct: 442 TREDISAAVVVCRDDQLMAYCVPKATIASAGKTEKALDQVL 482
>UniRef50_Q8PW46 Cluster: 50S ribosomal protein L18e; n=16;
Euryarchaeota|Rep: 50S ribosomal protein L18e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 126
Score = 32.7 bits (71), Expect = 3.7
Identities = 27/87 (31%), Positives = 44/87 (50%)
Frame = +2
Query: 131 ILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVT 310
I +RL N +++S++ RH T E + +V G V L P +TVAA+ +
Sbjct: 39 IAKRLEAPSRNYAAVNISKINRH----TAENDVLLVPGKVLG-AGLLDHP-VTVAAVTFS 92
Query: 311 EKARARILAAGGEILTFDQLALRAPTG 391
E A +I AGG+ L+ +++ P G
Sbjct: 93 ESAVEKITEAGGKCLSVEEIMEANPKG 119
>UniRef50_Q1K398 Cluster: Hydroxyacylglutathione hydrolase; n=1;
Desulfuromonas acetoxidans DSM 684|Rep:
Hydroxyacylglutathione hydrolase - Desulfuromonas
acetoxidans DSM 684
Length = 249
Score = 31.5 bits (68), Expect = 8.6
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -3
Query: 419 GDPEPVLSYVQWAHGGLTGQTLESHLQQPRCGHELS 312
G+ EPVL Y++ HG L +H+ Q CG L+
Sbjct: 30 GEAEPVLDYLE-KHGRSLSLILNTHMHQDHCGGNLT 64
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 426,839,253
Number of Sequences: 1657284
Number of extensions: 7943783
Number of successful extensions: 20647
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 20196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20630
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 23183027945
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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