Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_J09
(473 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 68 8e-13
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 53 2e-08
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 50 1e-07
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 48 1e-06
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 45 5e-06
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 44 9e-06
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 42 4e-05
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 42 4e-05
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 39 4e-04
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 38 8e-04
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 38 0.001
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 35 0.007
SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha su... 34 0.013
SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces... 30 0.21
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 28 0.63
SPAC2F3.16 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 28 0.63
SPBC36.09 |sap61||U2 snRNP-associated protein sap61|Schizosaccha... 28 0.83
SPAC222.16c |csn3|SPAC821.02c|COP9/signalosome complex subunit C... 27 1.1
SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual 27 1.1
SPAC6B12.08 |mug185||DNAJ domain protein Jjj family|Schizosaccha... 27 1.5
SPAC57A7.05 |||conserved protein |Schizosaccharomyces pombe|chr ... 26 2.5
SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3 Brl2|Schizosa... 26 3.4
SPCC777.02 |||transcription factor |Schizosaccharomyces pombe|ch... 26 3.4
SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharo... 26 3.4
SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces ... 26 3.4
SPBC4.05 |mlo2||zinc finger protein Mlo2|Schizosaccharomyces pom... 25 4.5
SPBC713.06 |adl1|lig3|DNA ligase |Schizosaccharomyces pombe|chr ... 25 4.5
SPBC16D10.05 |mok13||alpha-1,3-glucan synthase Mok13|Schizosacch... 25 5.9
SPAPYUG7.04c |rpb9||DNA-directed RNA polymerase II complex subun... 25 7.8
SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2 |Schizo... 25 7.8
SPBC651.10 |nse5||Smc5-6 complex non-SMC subunit Nse5|Schizosacc... 25 7.8
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 67.7 bits (158), Expect = 8e-13
Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 10/137 (7%)
Frame = +1
Query: 76 CNKVFSSLARLRQHKKTHDRNRTRNYTCD--TCGKAFYELNVLRAHKLTHSE-KRFACKL 246
C K +S + L QH +TH R + CD C KAFY + L+ HK H+ K F+C
Sbjct: 30 CGKKYSRPSLLEQHLRTHSNERP--FVCDYTGCSKAFYRKSHLKIHKRCHTNVKPFSCHY 87
Query: 247 --CEKAFHTKINLREHVAMHLDEKLFQC--DECGKGFNIKNHLKYHLTT-HSGNKPHKCP 411
C+ F+T+ +L H+ +H K + C + C + F+ L+ H++ H+ P+ C
Sbjct: 88 DGCDAQFYTQQHLERHIEVHRKPKPYACTWEGCDECFSKHQQLRSHISACHTHLLPYPCT 147
Query: 412 V--CGKAFRSTHDLEIH 456
C F + L+ H
Sbjct: 148 YQDCELRFATKQKLQNH 164
Score = 64.5 bits (150), Expect = 8e-12
Identities = 42/136 (30%), Positives = 61/136 (44%), Gaps = 8/136 (5%)
Frame = +1
Query: 88 FSSLARLRQHKKTHDRNRTRNYTCDTCGKAFYELNVLRAHKLTHSEKR-FACKL--CEKA 258
F+ L+ + K + + + CGK + ++L H THS +R F C C KA
Sbjct: 4 FNELSIEIESKNLRSAKKIFHCPYEECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKA 63
Query: 259 FHTKINLREHVAMHLDEKLFQC--DECGKGFNIKNHLKYHLTTHSGNKPHKC--PVCGKA 426
F+ K +L+ H H + K F C D C F + HL+ H+ H KP+ C C +
Sbjct: 64 FYRKSHLKIHKRCHTNVKPFSCHYDGCDAQFYTQQHLERHIEVHRKPKPYACTWEGCDEC 123
Query: 427 FRSTHDLEIH-SHQHT 471
F L H S HT
Sbjct: 124 FSKHQQLRSHISACHT 139
Score = 55.2 bits (127), Expect = 5e-09
Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 11/143 (7%)
Frame = +1
Query: 76 CNKVFSSLARLRQH-KKTHDRNRTRNYTCDTC--GKAFYELNVLRAH-KLTHSEKRFACK 243
C F++ +L+ H + H++ + + ++C + F + + L+ H + H +C
Sbjct: 151 CELRFATKQKLQNHVNRAHEKIISYSCPHESCVGHEGFEKWSQLQNHIREAHVP---SCS 207
Query: 244 LCEKAFHTKINLREHVAMH---LDE-KLFQC--DECGKGFNIKNHLKYHLTT-HSGNKPH 402
+C + F T +LR HV +H L+E K + C + C K F + LK H++ H GN
Sbjct: 208 ICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGNMAF 267
Query: 403 KCPVCGKAFRSTHDLEIHSHQHT 471
C CG F H L+ H + T
Sbjct: 268 HCDSCGTKFGYKHMLQRHLERGT 290
Score = 53.6 bits (123), Expect = 1e-08
Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 10/114 (8%)
Frame = +1
Query: 154 TCDTCGKAFYELNVLRAHKLTHS-----EKRFACKL--CEKAFHTKINLREHVAM-HLDE 309
+C CG+ F LR H + H K + C + C+K+F L++H+++ H
Sbjct: 205 SCSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGN 264
Query: 310 KLFQCDECGKGFNIKNHLKYHLTTHSGNKPHKCPV--CGKAFRSTHDLEIHSHQ 465
F CD CG F K+ L+ HL + K HK + CG + IH +
Sbjct: 265 MAFHCDSCGTKFGYKHMLQRHLERGTCKKAHKPYINECGIKHDGIEGVAIHDQK 318
Score = 39.9 bits (89), Expect = 2e-04
Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 8/99 (8%)
Frame = +1
Query: 64 TCAVCNKVFSSLARLRQHKKTHDR--NRTRNYTC--DTCGKAFYELNVLRAH-KLTH-SE 225
+C++C + F + A LR H H + Y C + C K+F + L+ H + H
Sbjct: 205 SCSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGN 264
Query: 226 KRFACKLCEKAFHTKINLREHVAMHLDEKLFQ--CDECG 336
F C C F K L+ H+ +K + +ECG
Sbjct: 265 MAFHCDSCGTKFGYKHMLQRHLERGTCKKAHKPYINECG 303
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 53.2 bits (122), Expect = 2e-08
Identities = 24/74 (32%), Positives = 35/74 (47%)
Frame = +1
Query: 247 CEKAFHTKINLREHVAMHLDEKLFQCDECGKGFNIKNHLKYHLTTHSGNKPHKCPVCGKA 426
C K K N+ H+ HL ++ ++CD C GF + LK HL H +P+ C C K
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE-CLKR 508
Query: 427 FRSTHDLEIHSHQH 468
F L H ++
Sbjct: 509 FNRLDALNRHKQRN 522
Score = 35.1 bits (77), Expect = 0.006
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = +1
Query: 76 CNKVFSSLARLRQHKKTHDRNRTRNYTCDTCGKAFYELNVLRAHKLTHSEKR-FACKLCE 252
CNK + + H +TH +R Y CD C F + L+ H H R + C+ C
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRP--YRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE-CL 506
Query: 253 KAFHTKINLREH 288
K F+ L H
Sbjct: 507 KRFNRLDALNRH 518
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 50.4 bits (115), Expect = 1e-07
Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Frame = +1
Query: 148 NYTCDT--CGKAFYELNVLRAHKLTHSEKR-FACKLCEKAFHTKINLREHVAMHLDEKLF 318
NY C C K F L++H TH+ R F C +C+K+F + + R H +H K F
Sbjct: 569 NYVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAF 628
Query: 319 QCDECGKGFNIKNHLKYHLTTHSG 390
C C + F + L H + G
Sbjct: 629 ACVTCNQRFARMDALNRHYKSEVG 652
Score = 49.6 bits (113), Expect = 2e-07
Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 2/115 (1%)
Frame = +1
Query: 118 KKTHDRNRTRNYTCDTCGKAFYELNVLRAHKLTHSEKRFACKL--CEKAFHTKINLREHV 291
+ T R+R+ N G + +A + S+ + C C K F NL+ H+
Sbjct: 535 RNTRPRSRSLN---SLVGNKSENSSSSKAKSESKSQGNYVCTFAGCNKRFTRAYNLKSHM 591
Query: 292 AMHLDEKLFQCDECGKGFNIKNHLKYHLTTHSGNKPHKCPVCGKAFRSTHDLEIH 456
H + + FQC C K F ++ + H H+G K C C + F L H
Sbjct: 592 NTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQRFARMDALNRH 646
Score = 46.8 bits (106), Expect = 2e-06
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +1
Query: 331 CGKGFNIKNHLKYHLTTHSGNKPHKCPVCGKAFRSTHDLEIHSHQHT 471
C K F +LK H+ TH+ +P +C +C K+F HD H HT
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHT 623
Score = 45.6 bits (103), Expect = 4e-06
Identities = 26/76 (34%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +1
Query: 64 TCAVCNKVFSSLARLRQHKKTHDRNRTRNYTCDTCGKAFYELNVLRAHKLTHSE-KRFAC 240
T A CNK F+ L+ H TH R + C C K+F + R H+ H+ K FAC
Sbjct: 573 TFAGCNKRFTRAYNLKSHMNTH--TNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFAC 630
Query: 241 KLCEKAFHTKINLREH 288
C + F L H
Sbjct: 631 VTCNQRFARMDALNRH 646
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 47.6 bits (108), Expect = 1e-06
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +1
Query: 316 FQCDECGKGFNIKNHLKYHLTTHSGNKPHKC--PVCGKAFRSTHDLEIHSHQHT 471
++C C K F H H+ TH+G KPH C P C K F + +L H+ HT
Sbjct: 26 YKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHT 79
Score = 38.7 bits (86), Expect = 4e-04
Identities = 22/64 (34%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Frame = +1
Query: 118 KKTHDRNRTRNYTCDTCGKAFYELNVLRAHKLTHS-EKRFACKL--CEKAFHTKINLREH 288
+ T + + R Y C C KAFY L H TH+ EK C C K F L H
Sbjct: 15 RSTKNPDAPRPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRH 74
Query: 289 VAMH 300
+H
Sbjct: 75 ARIH 78
Score = 35.9 bits (79), Expect = 0.003
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = +1
Query: 199 RAHKLTHSEKRFACKLCEKAFHTKINLREHVAMHLDEKLFQC--DECGKGFNIKNHLKYH 372
R+ K + + + C LC KAF+ + H+ H EK C C K F+ + L H
Sbjct: 15 RSTKNPDAPRPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRH 74
Query: 373 LTTHS 387
H+
Sbjct: 75 ARIHT 79
Score = 33.1 bits (72), Expect = 0.022
Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 4/68 (5%)
Frame = +1
Query: 31 RPARSLTEADLT----CAVCNKVFSSLARLRQHKKTHDRNRTRNYTCDTCGKAFYELNVL 198
+P+RS D C +C K F L +H +TH + T C K F + L
Sbjct: 12 KPSRSTKNPDAPRPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDEL 71
Query: 199 RAHKLTHS 222
H H+
Sbjct: 72 TRHARIHT 79
Score = 29.1 bits (62), Expect = 0.36
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +1
Query: 394 KPHKCPVCGKAFRSTHDLEIHSHQHT 471
+P+KCP+C KAF H HT
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTHT 49
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 45.2 bits (102), Expect = 5e-06
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 310 KLFQCDECGKGFNIKNHLKYHL-TTHSGNKPHKCPVCGKAFRSTHDLEIHSHQH 468
K F C EC K F HL+ H+ + H+ KP C +CGK F +L H H
Sbjct: 421 KSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLH 473
Score = 41.9 bits (94), Expect = 5e-05
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +1
Query: 145 RNYTCDTCGKAFYELNVLRAH--KLTHSEKRFACKLCEKAFHTKINLREHVAMHLD 306
+++ C C K F LR H L SEK F C +C K F + NLR+H +H++
Sbjct: 421 KSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLHVN 475
Score = 33.1 bits (72), Expect = 0.022
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = +1
Query: 28 TRPARSLTEADLTCAVCNKVFSSLARLRQHKKTHDRNRTRNYTCDTCGKAFYELNVLRAH 207
T RS C C+K F LR+H ++ + + + C CGK F + LR H
Sbjct: 412 TSVPRSPGGKSFVCPECSKKFKRSEHLRRHIRSLHTSE-KPFVC-ICGKRFSRRDNLRQH 469
Query: 208 KLTH--SEKRFAC 240
+ H + R AC
Sbjct: 470 ERLHVNASPRLAC 482
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 44.4 bits (100), Expect = 9e-06
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +1
Query: 316 FQCDECGKGFNIKNHLKYHLTTHSGNKPHKCPV--CGKAFRSTHDLEIHSHQH 468
++C EC +GF+ + LK H +H+G +P C CGKAF ++ H H
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
Score = 37.9 bits (84), Expect = 8e-04
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +1
Query: 151 YTCDTCGKAFYELNVLRAHKLTHS-EKRFACKL--CEKAFHTKINLREHVAMH 300
Y C C + F + L+ H +H+ E+ F C C KAF+ + N+R H +H
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
Score = 28.7 bits (61), Expect = 0.48
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +1
Query: 352 KNHLKYHLTTHSGNKPHKCPVCGKAFRSTHDLEIHSHQHT 471
++H T+ + N ++C C + F L+IH++ HT
Sbjct: 452 QSHTGSSSTSSAANVRYRCTECLQGFSRPSSLKIHTYSHT 491
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 42.3 bits (95), Expect = 4e-05
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +1
Query: 226 KRFACKLCEKAFHTKINLREHVAMHLDEKLFQCD--ECGKGFNIKNHLKYHLTTH 384
K + C C++ FH + + H+ H EK F+C C K F ++ L H+ TH
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 40.3 bits (90), Expect = 1e-04
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +1
Query: 310 KLFQCDECGKGFNIKNHLKYHLTTHSGNKPHKC--PVCGKAFRSTHDLEIHSHQH 468
K ++C C + F+ + H H+ +H+G KP +C P C K F +L H H
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 33.1 bits (72), Expect = 0.022
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = +1
Query: 145 RNYTCDTCGKAFYELNVLRAHKLTHS-EKRFACKL--CEKAFHTKINLREHVAMHLDEKL 315
++Y C C + F+ H +H+ EK F C C+K F + L HV HL + L
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTHLRKAL 61
Score = 27.9 bits (59), Expect = 0.83
Identities = 14/54 (25%), Positives = 22/54 (40%)
Frame = +1
Query: 67 CAVCNKVFSSLARLRQHKKTHDRNRTRNYTCDTCGKAFYELNVLRAHKLTHSEK 228
C C +VF +H ++H + + +C K F + L H TH K
Sbjct: 6 CPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTHLRK 59
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 42.3 bits (95), Expect = 4e-05
Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Frame = +1
Query: 250 EKAFHTKINLREHVAMHLDEKLFQCD--ECGKGFNIKNHLKYHLTTHSGNKPHKCPVCGK 423
E++F K + A L + F C +C K F K HL+ H TH K C C +
Sbjct: 4 EESFTEKPLKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNR 63
Query: 424 AFRSTHDLEIHSHQ 465
AF + L H Q
Sbjct: 64 AFARSDVLNRHVQQ 77
Score = 41.5 bits (93), Expect = 6e-05
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +1
Query: 106 LRQHKKTHDRNRTRNY-TCDTCGKAFYELNVLRAHKLTHSE-KRFACKLCEKAFHTKINL 279
L++ + H R Y T C K+F LR H+ TH K F+C C +AF L
Sbjct: 12 LKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVL 71
Query: 280 REHV-AMHLDEK 312
HV MHL ++
Sbjct: 72 NRHVQQMHLQKQ 83
Score = 39.5 bits (88), Expect = 3e-04
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +1
Query: 199 RAHKLTHSEKRFACKL--CEKAFHTKINLREHVAMHLDEKLFQCDECGKGFNIKNHLKYH 372
RAH+L + RF C C K+F K +LR H H + K F C C + F + L H
Sbjct: 17 RAHRL--GDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRH 74
Query: 373 L 375
+
Sbjct: 75 V 75
Score = 36.7 bits (81), Expect = 0.002
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +1
Query: 76 CNKVFSSLARLRQHKKTHDRNRTRNYTCDTCGKAFYELNVLRAH-KLTHSEKR 231
C K F+ LR+H++TH+ + ++C C +AF +VL H + H +K+
Sbjct: 33 CPKSFTRKEHLRRHERTHE--NVKAFSCSFCNRAFARSDVLNRHVQQMHLQKQ 83
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 38.7 bits (86), Expect = 4e-04
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +1
Query: 316 FQCD--ECGKGFNIKNHLKYHLTTHSGNKPHKCPVCGKAFRSTHDLEIHSHQ 465
++CD C K F K H + H +H+ +K CP C +F + L H +Q
Sbjct: 17 YKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHVNQ 68
Score = 34.3 bits (75), Expect = 0.010
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Frame = +1
Query: 229 RFACKL--CEKAFHTKINLREHVAMHLDEKLFQCDECGKGFNIKNHLKYHL 375
R+ C C K+F K + R H H + K F C C F + L H+
Sbjct: 16 RYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHV 66
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 37.9 bits (84), Expect = 8e-04
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 7/56 (12%)
Frame = +1
Query: 226 KRFACKLCEKAFHTKINLREHVAMHLDEKLFQCDE-------CGKGFNIKNHLKYH 372
K++ C+ C +AF +L+ H+ H +EK F C E CG+ F+ ++ L H
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRH 123
Score = 35.1 bits (77), Expect = 0.006
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 7/59 (11%)
Frame = +1
Query: 310 KLFQCDECGKGFNIKNHLKYHLTTHSGNKPHKC------PV-CGKAFRSTHDLEIHSHQ 465
K + C+ C + F HLK H+ +H+ KP C P CG+ F S DL + Q
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQF-SRRDLLLRHQQ 125
Score = 34.3 bits (75), Expect = 0.010
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +1
Query: 139 RTRNYTCDTCGKAFYELNVLRAHKLTH-SEKRFAC 240
+ + Y C+TC +AF L L+ H +H +EK F C
Sbjct: 66 KVKQYVCETCTRAFARLEHLKRHIRSHTNEKPFTC 100
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 37.5 bits (83), Expect = 0.001
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +1
Query: 307 EKLFQCDECGKGFNIKNHLKYHLTTHSGNKPHKCPVC 417
+++F CD+C K F +L H HS +P CP C
Sbjct: 28 KRVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYC 64
Score = 33.9 bits (74), Expect = 0.013
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = +1
Query: 145 RNYTCDTCGKAFYELNVLRAHKLTHSE-KRFACKLCEKAFHTKINLREHV-AMHLDEKLF 318
R + CD C K F L HK HS+ + C CE K L+ H+ H D+ +
Sbjct: 29 RVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFHNDKSVI 88
Query: 319 Q 321
+
Sbjct: 89 E 89
Score = 33.1 bits (72), Expect = 0.022
Identities = 19/62 (30%), Positives = 25/62 (40%)
Frame = +1
Query: 211 LTHSEKRFACKLCEKAFHTKINLREHVAMHLDEKLFQCDECGKGFNIKNHLKYHLTTHSG 390
L S++ F C C K F NL H A H + C C K+ LK H+
Sbjct: 24 LIDSKRVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFHN 83
Query: 391 NK 396
+K
Sbjct: 84 DK 85
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 34.7 bits (76), Expect = 0.007
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 22/76 (28%)
Frame = +1
Query: 307 EKLFQCD--ECGKGFNIKNHLKYH--------LTT-------HSG----NKPHKCPVCGK 423
+K ++C C K + +N LKYH +TT H G NKP++C VC K
Sbjct: 347 DKPYKCPVPNCDKAYKNQNGLKYHKLHGHCSPITTPTPAPIPHQGFVVENKPYRCEVCSK 406
Query: 424 AFRSTHDLEIH-SHQH 468
+++ + L+ H +H H
Sbjct: 407 RYKNLNGLKYHRTHSH 422
Score = 32.3 bits (70), Expect = 0.039
Identities = 26/81 (32%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
Frame = +1
Query: 151 YTCDT--CGKAFYELNVLRAHKLTHSEKRFACKLCEKAFHTKINLREHVAMHLDEKLFQC 324
Y C C KA+ N L+ HKL H C I H ++ K ++C
Sbjct: 350 YKCPVPNCDKAYKNQNGLKYHKL-HGH----CSPITTPTPAPI---PHQGFVVENKPYRC 401
Query: 325 DECGKGFNIKNHLKYHLTTHS 387
+ C K + N LKYH THS
Sbjct: 402 EVCSKRYKNLNGLKYH-RTHS 421
>SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha
subunit Tfa1 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 448
Score = 33.9 bits (74), Expect = 0.013
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Frame = +1
Query: 76 CNKVFSSLARLRQHKKT-HDRNR----TRNYTCDTCGKAFYELNVLRAHKLTHSEKRFAC 240
C+ + S R+ Q KT DR R ++ Y C C K F L+VL L +E FAC
Sbjct: 106 CSTIDSIKWRMHQLVKTVEDRMRNDFDSKGYVCPFCNKKFSSLDVL---SLVTNEGTFAC 162
Query: 241 KLC 249
+C
Sbjct: 163 NVC 165
>SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 637
Score = 29.9 bits (64), Expect = 0.21
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +1
Query: 34 PARSLTEADLTCAVCNKVFSSLARLRQHKKTHDRNRTRNYTCDTCG 171
P R + +T +CN VFS L +H+ T + C+ CG
Sbjct: 571 PVRCTLQNRVTGEICNTVFSRTYDLIRHQDTIHAKTRPVFRCEICG 616
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 28.3 bits (60), Expect = 0.63
Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
Frame = +1
Query: 274 NLREHVAMHLDEKLFQCDECGKGFNIKNH---LKYHLTTHSGNKPHKC--PVCGKAFRST 438
++ +H+ + + D+C + ++ L HL +H+G KP C P C ++F +
Sbjct: 61 SILDHIGNRRPKYTCEWDDCPRKGMVQTSRFALVAHLRSHTGEKPFICSVPECDRSFTRS 120
Query: 439 HDLEIH 456
L H
Sbjct: 121 DALAKH 126
>SPAC2F3.16 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 425
Score = 28.3 bits (60), Expect = 0.63
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 8/55 (14%)
Frame = +1
Query: 58 DLTCAVCNK-VFSSLARL-------RQHKKTHDRNRTRNYTCDTCGKAFYELNVL 198
D C +C + +F+S R+ H++ H+ NY C TC K +N L
Sbjct: 268 DCNCPICGEYMFNSRERVIFLSCSHPLHQRCHEEYIRTNYRCPTCYKTIINVNSL 322
>SPBC36.09 |sap61||U2 snRNP-associated protein
sap61|Schizosaccharomyces pombe|chr 2|||Manual
Length = 492
Score = 27.9 bits (59), Expect = 0.83
Identities = 12/51 (23%), Positives = 24/51 (47%)
Frame = +1
Query: 133 RNRTRNYTCDTCGKAFYELNVLRAHKLTHSEKRFACKLCEKAFHTKINLRE 285
++ T + C+ C K F ++ V AHK + + + ++ + T N E
Sbjct: 237 KDSTEAFYCEVCQKFFGKITVFEAHKKSKAHNKAVKRMQSSSPSTTSNTNE 287
Score = 26.2 bits (55), Expect = 2.5
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +1
Query: 31 RPARSLTEADLTCAVCNKVFSSLARLRQHKKTHDRNR 141
+ + TEA C VC K F + HKK+ N+
Sbjct: 234 KDGKDSTEA-FYCEVCQKFFGKITVFEAHKKSKAHNK 269
>SPAC222.16c |csn3|SPAC821.02c|COP9/signalosome complex subunit Csn3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 334
Score = 27.5 bits (58), Expect = 1.1
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = -3
Query: 357 IFNVEPFTTLVALEELLVQMHSDMLTQVYLRVESFFAQLAGESFL 223
+ N E F T AL+++ +MHSD+ Q+ ++F A + +S +
Sbjct: 279 VANGEIFLTFNALDDVSPEMHSDLCQQLIEASKNFEASIRLKSVI 323
>SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1489
Score = 27.5 bits (58), Expect = 1.1
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -1
Query: 314 SFSSKCIATCSRKFIFVWKAFSHSLQANLFSLCVNLCALKT 192
+ S K + SRKF+ +++ F + LQ N L ALKT
Sbjct: 801 TLSMKSLNNSSRKFLELYQCFFYVLQTNEMYLANYFQALKT 841
>SPAC6B12.08 |mug185||DNAJ domain protein Jjj
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 380
Score = 27.1 bits (57), Expect = 1.5
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 391 NKPHKCPVCGKAFRSTHDLEIHSH 462
+ P C VC K FRS + LE H +
Sbjct: 267 SNPIMCMVCNKNFRSQNQLENHEN 290
Score = 26.2 bits (55), Expect = 2.5
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = +1
Query: 61 LTCAVCNKVFSSLARLRQHK--KTHDRN 138
+ C VCNK F S +L H+ K H +N
Sbjct: 270 IMCMVCNKNFRSQNQLENHENSKKHKKN 297
>SPAC57A7.05 |||conserved protein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1337
Score = 26.2 bits (55), Expect = 2.5
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -1
Query: 350 MLNPLPHSSHWKSFSS 303
ML+ P SSHW SFSS
Sbjct: 437 MLSHSPASSHWASFSS 452
>SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3
Brl2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 680
Score = 25.8 bits (54), Expect = 3.4
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = +1
Query: 394 KPHKCPVCGKAFRSTHDLEIH 456
+ +CP+CG+ F ++ + IH
Sbjct: 659 RQRRCPICGRGFGASDVIPIH 679
>SPCC777.02 |||transcription factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 632
Score = 25.8 bits (54), Expect = 3.4
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +1
Query: 388 GNKPHKCPVCGKAFRSTHDLEIH 456
GN H +CG AFR DL H
Sbjct: 274 GNTSHGWLLCGMAFRMGQDLGFH 296
>SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1588
Score = 25.8 bits (54), Expect = 3.4
Identities = 12/41 (29%), Positives = 17/41 (41%)
Frame = +1
Query: 238 CKLCEKAFHTKINLREHVAMHLDEKLFQCDECGKGFNIKNH 360
C+LC + +H K + DEK F C C + H
Sbjct: 1187 CELCHEWYHAKCMKMSKKKLRADEK-FICPICDYRVEVPRH 1226
>SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 463
Score = 25.8 bits (54), Expect = 3.4
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +1
Query: 151 YTCDTCGKAFYELNVLRAH 207
+TC TC + F L +RAH
Sbjct: 259 FTCLTCNREFKSLEAVRAH 277
Score = 25.4 bits (53), Expect = 4.5
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +1
Query: 64 TCAVCNKVFSSLARLRQH 117
TC CN+ F SL +R H
Sbjct: 260 TCLTCNREFKSLEAVRAH 277
>SPBC4.05 |mlo2||zinc finger protein Mlo2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 329
Score = 25.4 bits (53), Expect = 4.5
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Frame = +1
Query: 214 THSEKRFACKLCEKAFHTKINLREHVAMHL-DEKLFQ---CDECGKGFNIKNHL 363
T F C LCE FH K + + + + D + F+ C EC + + ++HL
Sbjct: 133 TEEGTMFQCILCEDWFHEKCLQKTNKGIAIPDAETFEWLVCSECSEKY--RDHL 184
>SPBC713.06 |adl1|lig3|DNA ligase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 774
Score = 25.4 bits (53), Expect = 4.5
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 16 QFISTRPARSLTEADLTCAVCNKVF 90
Q +STR + +T AD+T VC VF
Sbjct: 500 QKLSTRERKKVTVADITIDVCVFVF 524
>SPBC16D10.05 |mok13||alpha-1,3-glucan synthase
Mok13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2358
Score = 25.0 bits (52), Expect = 5.9
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 8/60 (13%)
Frame = -1
Query: 467 CWWEW---ISRSWVDLNALPHTGHLCGLL-----PLCVVKWYFK*FLMLNPLPHSSHWKS 312
C W W I RS + ++ PH + GL+ PL +V F L++ LP +W+S
Sbjct: 2072 CLWYWGSYIDRSMQECHSFPHEVYPLGLIAVFSWPLALVMLLFA-ILLIFGLP-DYYWES 2129
>SPAPYUG7.04c |rpb9||DNA-directed RNA polymerase II complex subunit
Rpb9 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 113
Score = 24.6 bits (51), Expect = 7.8
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = +1
Query: 25 STRPARSLTEADLTCAVCNKVFSSLARLRQHKKTHDRNRTRNYTCDTCGKAFYE 186
ST P +L +D C C++ + H + D T Y C CG AF E
Sbjct: 63 STDP--TLPRSDKECPRCHQ--HEAVFYQTHSRRGDTMMTLIYVCVHCGFAFEE 112
>SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1513
Score = 24.6 bits (51), Expect = 7.8
Identities = 12/42 (28%), Positives = 18/42 (42%)
Frame = +1
Query: 208 KLTHSEKRFACKLCEKAFHTKINLREHVAMHLDEKLFQCDEC 333
+L S C++C + +H K + DEK F C C
Sbjct: 1102 RLPESGVMIECEICHEWYHAKCLKMSKKKLRQDEK-FTCPIC 1142
>SPBC651.10 |nse5||Smc5-6 complex non-SMC subunit
Nse5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 388
Score = 24.6 bits (51), Expect = 7.8
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -1
Query: 371 WYFK*FLMLNPLPHSSHWKSFSSKCIAT 288
W F+ L N +P ++ K FS++C+ T
Sbjct: 82 WSFENDLSDNDMPKENYLKIFSNQCLFT 109
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,091,307
Number of Sequences: 5004
Number of extensions: 42373
Number of successful extensions: 213
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 191
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 182448900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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