Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_J09
(473 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein ... 78 3e-15
At3g10470.1 68416.m01255 zinc finger (C2H2 type) family protein ... 52 2e-07
At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein ... 51 5e-07
At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein ... 47 6e-06
At1g02030.1 68414.m00123 zinc finger (C2H2 type) family protein ... 46 2e-05
At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein ... 43 9e-05
At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein ... 43 1e-04
At2g37430.1 68415.m04590 zinc finger (C2H2 type) family protein ... 42 2e-04
At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5) ... 42 2e-04
At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein ... 42 2e-04
At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein ... 41 5e-04
At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3) ... 41 5e-04
At3g60580.1 68416.m06777 zinc finger (C2H2 type) family protein ... 40 7e-04
At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein ... 40 7e-04
At3g46070.1 68416.m04985 zinc finger (C2H2 type) family protein ... 40 7e-04
At5g04390.1 68418.m00431 zinc finger (C2H2 type) family protein ... 40 9e-04
At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein ... 40 9e-04
At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein ... 40 0.001
At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein ... 40 0.001
At2g45120.1 68415.m05615 zinc finger (C2H2 type) family protein ... 40 0.001
At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein ... 39 0.002
At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4) ... 39 0.002
At1g27730.1 68414.m03389 zinc finger (C2H2 type) family protein ... 39 0.002
At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein ... 39 0.002
At2g28200.1 68415.m03424 zinc finger (C2H2 type) family protein ... 38 0.003
At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein ... 38 0.003
At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein ... 38 0.003
At1g34370.2 68414.m04268 zinc finger (C2H2 type) family protein ... 38 0.005
At1g34370.1 68414.m04267 zinc finger (C2H2 type) family protein ... 38 0.005
At1g34790.1 68414.m04337 transparent testa 1 protein (TT1) / zin... 37 0.006
At5g60470.1 68418.m07584 zinc finger (C2H2 type) family protein ... 37 0.008
At5g44160.1 68418.m05404 zinc finger (C2H2 type) family protein ... 37 0.008
At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein ... 37 0.008
At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein ... 36 0.011
At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein ... 36 0.014
At5g67450.1 68418.m08504 zinc finger (C2H2 type) protein 1 (AZF1... 36 0.019
At5g61470.1 68418.m07713 zinc finger (C2H2 type) family protein ... 36 0.019
At5g04340.1 68418.m00426 zinc finger (C2H2 type) family protein ... 36 0.019
At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein ... 36 0.019
At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2) ... 35 0.024
At3g49930.1 68416.m05460 zinc finger (C2H2 type) family protein ... 35 0.032
At3g19580.1 68416.m02483 zinc finger (C2H2 type) protein 2 (AZF2... 35 0.032
At5g43170.1 68418.m05269 zinc finger (C2H2 type) protein 3 (AZF3... 34 0.043
At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein ... 34 0.057
At5g22890.1 68418.m02677 zinc finger (C2H2 type) family protein ... 33 0.099
At5g15480.1 68418.m01812 zinc finger (C2H2 type) family protein ... 33 0.099
At5g03510.1 68418.m00307 zinc finger (C2H2 type) family protein ... 33 0.099
At2g41835.1 68415.m05170 zinc finger (C2H2 type, AN1-like) famil... 33 0.099
At1g26610.1 68414.m03241 zinc finger (C2H2 type) family protein ... 33 0.099
At3g53600.1 68416.m05920 zinc finger (C2H2 type) family protein ... 33 0.13
At1g49900.1 68414.m05596 zinc finger (C2H2 type) family protein ... 33 0.13
At1g26590.1 68414.m03239 zinc finger (C2H2 type) family protein ... 33 0.13
At5g22920.1 68418.m02680 zinc finger (C3HC4-type RING finger) fa... 32 0.23
At3g46090.1 68416.m04987 zinc finger (C2H2 type) family protein ... 32 0.23
At3g46080.1 68416.m04986 zinc finger (C2H2 type) family protein ... 31 0.30
At5g59820.1 68418.m07500 zinc finger (C2H2 type) family protein ... 31 0.53
At4g04404.1 68417.m00636 zinc finger (C2H2 type) family protein ... 31 0.53
At3g13020.1 68416.m01622 hAT dimerisation domain-containing prot... 31 0.53
At5g27880.1 68418.m03344 zinc finger (C2H2 type) family protein ... 30 0.70
At5g63280.1 68418.m07942 zinc finger (C2H2 type) family protein ... 30 0.92
At3g01030.1 68416.m00004 zinc finger (C2H2 type) family protein ... 30 0.92
At1g13290.1 68414.m01543 zinc finger (C2H2 type) family protein ... 30 0.92
At1g03280.1 68414.m00306 transcription initiation factor IIE (TF... 30 0.92
At1g80730.1 68414.m09472 zinc finger (C2H2 type) family protein ... 29 1.2
At4g16015.1 68417.m02430 DC1 domain-containing protein contains ... 29 1.6
At3g27970.1 68416.m03491 exonuclease family protein contains exo... 29 1.6
At2g28710.1 68415.m03490 zinc finger (C2H2 type) family protein ... 29 1.6
At2g19380.1 68415.m02260 RNA recognition motif (RRM)-containing ... 29 1.6
At2g13430.1 68415.m01482 hypothetical protein 29 2.1
At1g22060.1 68414.m02759 expressed protein 29 2.1
At4g20340.1 68417.m02969 transcription initiation factor IIE (TF... 28 2.8
At2g23740.1 68415.m02834 zinc finger (C2H2 type) family protein ... 28 2.8
At2g23100.1 68415.m02756 DC1 domain-containing protein contains ... 28 2.8
At1g49330.1 68414.m05529 hydroxyproline-rich glycoprotein family... 28 2.8
At1g24625.1 68414.m03099 zinc finger (C2H2 type) family protein ... 28 2.8
At5g56200.1 68418.m07012 zinc finger (C2H2 type) family protein ... 28 3.7
At4g35700.1 68417.m05067 zinc finger (C2H2 type) family protein ... 28 3.7
At4g08330.1 68417.m01375 expressed protein 28 3.7
At3g13010.1 68416.m01621 hAT dimerisation domain-containing prot... 28 3.7
At2g15740.1 68415.m01802 zinc finger (C2H2 type) family protein ... 28 3.7
At5g57520.1 68418.m07187 zinc finger (C2H2 type) family protein ... 27 4.9
At5g06070.1 68418.m00673 zinc finger (C2H2 type) family protein ... 27 4.9
At3g20280.2 68416.m02570 PHD finger family protein contains Pfam... 27 4.9
At3g20280.1 68416.m02569 PHD finger family protein contains Pfam... 27 4.9
At1g50710.1 68414.m05702 expressed protein 27 4.9
At1g02040.1 68414.m00124 zinc finger (C2H2 type) family protein ... 27 4.9
At2g17180.1 68415.m01984 zinc finger (C2H2 type) family protein ... 27 6.5
At1g66140.1 68414.m07506 zinc finger (C2H2 type) family protein ... 27 6.5
At1g47280.1 68414.m05234 expressed protein 27 6.5
At1g10480.1 68414.m01180 zinc finger (C2H2 type) family protein ... 27 6.5
At5g36060.1 68418.m04344 hypothetical protein 27 8.6
At5g25160.1 68418.m02983 zinc finger (C2H2 type) family protein ... 27 8.6
At5g10970.1 68418.m01275 zinc finger (C2H2 type) family protein ... 27 8.6
At5g09790.1 68418.m01133 PHD finger family protein / SET domain-... 27 8.6
At5g01860.1 68418.m00105 zinc finger (C2H2 type) family protein ... 27 8.6
At3g49980.1 68416.m05465 F-box family protein similar to F-box p... 27 8.6
At2g26940.1 68415.m03231 zinc finger (C2H2 type) family protein ... 27 8.6
At2g19260.1 68415.m02248 ELM2 domain-containing protein / PHD fi... 27 8.6
>At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein
contains Pfam PF00096: Zinc finger, C2H2 type
Length = 387
Score = 78.2 bits (184), Expect = 3e-15
Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 4/105 (3%)
Frame = +1
Query: 160 DTCGKAFYELNVLRAHKLTHSEKRFACKL--CEKAFHTKINLREHVAMHLDEKLFQC--D 327
D CGK F++++ LR H H E+++ C C K F L+ H +H E+ + C +
Sbjct: 84 DGCGKTFFDVSALRKHSHIHGERQYVCDQEGCGKKFLDSSKLKRHYLIHTGERNYICTYE 143
Query: 328 ECGKGFNIKNHLKYHLTTHSGNKPHKCPVCGKAFRSTHDLEIHSH 462
CGK F++ +L+ H+ THS H CP G R H+ ++ +H
Sbjct: 144 GCGKAFSLDFNLRSHMKTHSQENYHICPYSGCVKRYAHEYKLKNH 188
Score = 66.9 bits (156), Expect = 7e-12
Identities = 43/132 (32%), Positives = 57/132 (43%), Gaps = 12/132 (9%)
Frame = +1
Query: 76 CNKVFSSLARLRQHKKTHDRNRTRNYTCDT--CGKAFYELNVLRAHKLTHS-EKRFACKL 246
C K F ++ LR+H H R Y CD CGK F + + L+ H L H+ E+ + C
Sbjct: 86 CGKTFFDVSALRKHSHIHGE---RQYVCDQEGCGKKFLDSSKLKRHYLIHTGERNYICTY 142
Query: 247 --CEKAFHTKINLREHVAMHLDEKLFQCDECG------KGFNIKNHL-KYHLTTHSGNKP 399
C KAF NLR H+ H E C G + +KNH+ YH G P
Sbjct: 143 EGCGKAFSLDFNLRSHMKTHSQENYHICPYSGCVKRYAHEYKLKNHVAAYHEKNGGGETP 202
Query: 400 HKCPVCGKAFRS 435
P K R+
Sbjct: 203 KYTPPAEKVLRT 214
Score = 49.2 bits (112), Expect = 1e-06
Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 6/90 (6%)
Frame = +1
Query: 220 SEKRFACKL--CEKAFHTKINLREHVAMHLDEKLFQCDE--CGKGFNIKNHLKYHLTTHS 387
+E F C C K F LR+H +H E+ + CD+ CGK F + LK H H+
Sbjct: 75 TEILFLCSYDGCGKTFFDVSALRKHSHIH-GERQYVCDQEGCGKKFLDSSKLKRHYLIHT 133
Query: 388 GNKPHKCPV--CGKAFRSTHDLEIHSHQHT 471
G + + C CGKAF +L H H+
Sbjct: 134 GERNYICTYEGCGKAFSLDFNLRSHMKTHS 163
>At3g10470.1 68416.m01255 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 398
Score = 52.4 bits (120), Expect = 2e-07
Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 1/107 (0%)
Frame = +1
Query: 151 YTCDTCGKAFYELNVLRAHKLTHSEKRFACKLCEKAFHTKINLREHVAMHLDEKLFQCDE 330
Y C TC + F L H+ +H + + A L H K N + V++HL+ L
Sbjct: 182 YQCKTCDRTFPSFQALGGHRASHKKPKAAMGLHSNHDHKKSNYDDAVSLHLNNVLTTTPN 241
Query: 331 CGKGFNIKNHLKYHL-TTHSGNKPHKCPVCGKAFRSTHDLEIHSHQH 468
N NH + S NK H+C +CG F S L H +H
Sbjct: 242 -----NNSNHRSLVVYGKGSNNKVHECGICGAEFTSGQALGGHMRRH 283
>At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 412
Score = 50.8 bits (116), Expect = 5e-07
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 2/101 (1%)
Frame = +1
Query: 64 TCAVCNKVFSSLARLRQHKKTHDRNRTRNYTCDTCGKAFYELNVLRAHKLTHSEKRFAC- 240
TC C F A L+QH ++H R+ D C ++ + L H LTH K F C
Sbjct: 67 TCQECGAEFKKPAHLKQHMQSHSLERSFTCYVDDCAASYRRKDHLNRHLLTHKGKLFKCP 126
Query: 241 -KLCEKAFHTKINLREHVAMHLDEKLFQCDECGKGFNIKNH 360
+ C+ F + N+ HV + D G G K++
Sbjct: 127 KENCKSEFSVQGNVGRHVKKYHSNDNRDKDNTGLGDGDKDN 167
Score = 50.0 bits (114), Expect = 8e-07
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +1
Query: 220 SEKRFACKLCEKAFHTKINLREHVAMHLDEKLFQC--DECGKGFNIKNHLKYHLTTHSGN 393
S C+ C F +L++H+ H E+ F C D+C + K+HL HL TH G
Sbjct: 62 SSSNHTCQECGAEFKKPAHLKQHMQSHSLERSFTCYVDDCAASYRRKDHLNRHLLTHKG- 120
Query: 394 KPHKCP 411
K KCP
Sbjct: 121 KLFKCP 126
Score = 41.9 bits (94), Expect = 2e-04
Identities = 31/118 (26%), Positives = 47/118 (39%), Gaps = 2/118 (1%)
Frame = +1
Query: 121 KTHDRNRTRNYTCDTCGKAFYELNVLRAHKLTHSEKRFACKLCEKAFHTKINLREHVAMH 300
KT + RNY C CG + + ++ H +H + + ++A E + H
Sbjct: 10 KTSAKKDIRNYLCQYCGISRSKNYLITKHIQSHHQMELEEERDDEACEVD---EESSSNH 66
Query: 301 LDEKLFQCDECGKGFNIKNHLKYHLTTHSGNKPHKCPV--CGKAFRSTHDLEIHSHQH 468
C ECG F HLK H+ +HS + C V C ++R L H H
Sbjct: 67 T------CQECGAEFKKPAHLKQHMQSHSLERSFTCYVDDCAASYRRKDHLNRHLLTH 118
Score = 39.9 bits (89), Expect = 9e-04
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 8/104 (7%)
Frame = +1
Query: 121 KTHDRNRTRNYTCDTCGKAFYELNV---LRAHKLTHSEKRFACKL--CEKAFHTKINLRE 285
K+H R+ ++ C+ CG + N+ LR H S C++ C F NL++
Sbjct: 265 KSHIRSCHQHINCEICGSKHLKKNIKRHLRTHDEDSSPGEIKCEVEGCSSTFSKASNLQK 324
Query: 286 HV-AMHLDEKLFQC--DECGKGFNIKNHLKYHLTTHSGNKPHKC 408
H+ A+H D + F C CG F K+ H +SG + C
Sbjct: 325 HMKAVHDDIRPFVCGFPGCGMRFAYKHVRNKH--ENSGYHVYTC 366
>At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domians PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1327
Score = 47.2 bits (107), Expect = 6e-06
Identities = 29/90 (32%), Positives = 39/90 (43%), Gaps = 4/90 (4%)
Frame = +1
Query: 199 RAHKLTHSEKRFACKLCEKAFHTKINLREHVAMHLDEKLFQCD--ECGKGFNIKNHLKYH 372
+A TH R + C K F L H +H DE+ F+C C F + H
Sbjct: 1229 KAKLQTHKRNRCTHEGCGKKFRAHKYLVLHQRVHKDERPFECSWKGCSMTFKWQWARTEH 1288
Query: 373 LTTHSGNKPHKCPV--CGKAFRSTHDLEIH 456
L H+G +P+ C V CG +FR D H
Sbjct: 1289 LRLHTGERPYICKVDGCGLSFRFVSDYSRH 1318
>At1g02030.1 68414.m00123 zinc finger (C2H2 type) family protein
identical to C2H2 zinc finger protein ZAT1 [Arabidopsis
thaliana] gi|1418321|emb|CAA67227; contains Pfam domain,
PF00096: Zinc finger, C2H2 type
Length = 267
Score = 45.6 bits (103), Expect = 2e-05
Identities = 27/81 (33%), Positives = 38/81 (46%)
Frame = +1
Query: 226 KRFACKLCEKAFHTKINLREHVAMHLDEKLFQCDECGKGFNIKNHLKYHLTTHSGNKPHK 405
K F C+ CEK F + L H A H +K+ + D+ G +K K ++H H+
Sbjct: 158 KWFECETCEKVFKSYQALGGHRASH-KKKIAETDQLGSD-ELKKKKKKSTSSH-----HE 210
Query: 406 CPVCGKAFRSTHDLEIHSHQH 468
CP+C K F S L H H
Sbjct: 211 CPICAKVFTSGQALGGHKRSH 231
Score = 29.9 bits (64), Expect = 0.92
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +1
Query: 133 RNRTRNYTCDTCGKAFYELNVLRAHKLTHSEK 228
+ R + + C+TC K F L H+ +H +K
Sbjct: 154 KKRNKWFECETCEKVFKSYQALGGHRASHKKK 185
Score = 27.1 bits (57), Expect = 6.5
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 49 TEADLTCAVCNKVFSSLARLRQHKKTH 129
T + C +C KVF+S L HK++H
Sbjct: 205 TSSHHECPICAKVFTSGQALGGHKRSH 231
>At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 419
Score = 43.2 bits (97), Expect = 9e-05
Identities = 35/140 (25%), Positives = 62/140 (44%), Gaps = 2/140 (1%)
Frame = +1
Query: 16 QFISTRPARSLTEAD-LTCAVCNKVFSSLARLRQHKKTHDRNRTRNYTCDTCGKAFYELN 192
+ +S P R+L E+D C +CN+ F L+ H++ H + + +T + +
Sbjct: 55 EVVSLSP-RTLLESDRYVCEICNQGFQRDQNLQMHRRRH-KVPWKLLKRETNEEVRKRVY 112
Query: 193 VLRAHKLTHSEKRFACKLCEKAFHTKINLREHV-AMHLDEKLFQCDECGKGFNIKNHLKY 369
V H C A + +++H H + K + C+ C KG+ +++ K
Sbjct: 113 VCPEPTCLHHNP------CH-ALGDLVGIKKHFRRKHSNHKQWICERCSKGYAVQSDYKA 165
Query: 370 HLTTHSGNKPHKCPVCGKAF 429
HL T G + H C CG+ F
Sbjct: 166 HLKT-CGTRGHSCD-CGRVF 183
Score = 31.9 bits (69), Expect = 0.23
Identities = 24/103 (23%), Positives = 39/103 (37%), Gaps = 1/103 (0%)
Frame = +1
Query: 151 YTCDTCGKAFYELNVLRAHKLTHSEKRFACKLCEKAFHTKINLREHVAMHLDEKLFQ-CD 327
Y C+ C + F L+ H+ H + KL ++ + ++ R +V C
Sbjct: 70 YVCEICNQGFQRDQNLQMHRRRH---KVPWKLLKRETNEEVRKRVYVCPEPTCLHHNPCH 126
Query: 328 ECGKGFNIKNHLKYHLTTHSGNKPHKCPVCGKAFRSTHDLEIH 456
G IK H + HS +K C C K + D + H
Sbjct: 127 ALGDLVGIKKHFR---RKHSNHKQWICERCSKGYAVQSDYKAH 166
>At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 362
Score = 42.7 bits (96), Expect = 1e-04
Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 4/142 (2%)
Frame = +1
Query: 16 QFISTRPARSLTEAD-LTCAVCNKVFSSLARLRQHKKTHD---RNRTRNYTCDTCGKAFY 183
+ +S P R+L E+D C +CN+ F L+ H++ H + R+ + K Y
Sbjct: 24 EVVSLSP-RTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRDKKDEEVRKRVY 82
Query: 184 ELNVLRAHKLTHSEKRFACKLCEKAFHTKINLREHVAMHLDEKLFQCDECGKGFNIKNHL 363
V H + C K + R ++H K + C+ C KG+ +++
Sbjct: 83 ---VCPEPTCLHHD---PCHALGDLVGIKKHFRRKHSVH---KQWVCERCSKGYAVQSDY 133
Query: 364 KYHLTTHSGNKPHKCPVCGKAF 429
K HL T G++ H C CG+ F
Sbjct: 134 KAHLKT-CGSRGHSCD-CGRVF 153
>At2g37430.1 68415.m04590 zinc finger (C2H2 type) family protein
(ZAT11) contains Pfam domain, PF00096: Zinc finger, C2H2
type
Length = 178
Score = 42.3 bits (95), Expect = 2e-04
Identities = 26/91 (28%), Positives = 39/91 (42%)
Frame = +1
Query: 196 LRAHKLTHSEKRFACKLCEKAFHTKINLREHVAMHLDEKLFQCDECGKGFNIKNHLKYHL 375
L H +H+ +F CK C K F + L H A H KL + +K+
Sbjct: 35 LNQHTESHTSNQFECKTCNKRFSSFQALGGHRASHKKPKLTV---------EQKDVKHLS 85
Query: 376 TTHSGNKPHKCPVCGKAFRSTHDLEIHSHQH 468
+ GN HKC +C ++F + L H +H
Sbjct: 86 NDYKGNHFHKCSICSQSFGTGQALGGHMRRH 116
Score = 30.7 bits (66), Expect = 0.53
Identities = 24/97 (24%), Positives = 38/97 (39%)
Frame = +1
Query: 10 MRQFISTRPARSLTEADLTCAVCNKVFSSLARLRQHKKTHDRNRTRNYTCDTCGKAFYEL 189
++Q + S T C CNK FSS L H+ +H + + D
Sbjct: 30 VKQIGLNQHTESHTSNQFECKTCNKRFSSFQALGGHRASHKKPKLTVEQKDV-------K 82
Query: 190 NVLRAHKLTHSEKRFACKLCEKAFHTKINLREHVAMH 300
++ +K H K C +C ++F T L H+ H
Sbjct: 83 HLSNDYKGNHFHK---CSICSQSFGTGQALGGHMRRH 116
>At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5)
identical to WIP5 protein [Arabidopsis thaliana]
gi|18376498|emb|CAC86167; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 42.3 bits (95), Expect = 2e-04
Identities = 29/82 (35%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +1
Query: 172 KAFYELNVLRAH-KLTHSEKRFACKLCEKAFHTKINLREHVAMHLDEKLFQCDECGKGFN 348
K + L+ H K H K FAC++C KAF K + R H KL+ C CG F
Sbjct: 241 KPLKDFRTLQTHYKRKHGSKPFACRMCGKAFAVKGDWRTHEKN--CGKLWYC-SCGSDFK 297
Query: 349 IKNHLKYHLTTHSGNKPHKCPV 414
K LK H+ GN C +
Sbjct: 298 HKRSLKDHVKAF-GNGHVPCGI 318
Score = 30.7 bits (66), Expect = 0.53
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 361 LKYHLTTHSGNKPHKCPVCGKAFRSTHDLEIH 456
L+ H G+KP C +CGKAF D H
Sbjct: 249 LQTHYKRKHGSKPFACRMCGKAFAVKGDWRTH 280
Score = 29.5 bits (63), Expect = 1.2
Identities = 20/70 (28%), Positives = 32/70 (45%)
Frame = +1
Query: 82 KVFSSLARLRQHKKTHDRNRTRNYTCDTCGKAFYELNVLRAHKLTHSEKRFACKLCEKAF 261
K L+ H K ++ ++ + C CGKAF R H+ + K + C C F
Sbjct: 241 KPLKDFRTLQTHYKR--KHGSKPFACRMCGKAFAVKGDWRTHE-KNCGKLWYCS-CGSDF 296
Query: 262 HTKINLREHV 291
K +L++HV
Sbjct: 297 KHKRSLKDHV 306
>At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 439
Score = 41.9 bits (94), Expect = 2e-04
Identities = 36/143 (25%), Positives = 60/143 (41%), Gaps = 5/143 (3%)
Frame = +1
Query: 16 QFISTRPARSLTEAD-LTCAVCNKVFSSLARLRQHKKTHDRNRTRNYTCDTCGKAFYELN 192
+ +S P R+L E+D C +CN+ F L+ H++ H K N
Sbjct: 52 EVVSLSP-RTLLESDRYICEICNQGFQRDQNLQMHRRRH----------KVPWKLLKRDN 100
Query: 193 VLRAHKLTHSEKRFAC---KLCEKAFHTKINLREHV-AMHLDEKLFQCDECGKGFNIKNH 360
+ K + C C A + +++H H + K + C+ C KG+ +++
Sbjct: 101 NIEVKKRVYVCPEPTCLHHNPCH-ALGDLVGIKKHFRRKHSNHKQWVCERCSKGYAVQSD 159
Query: 361 LKYHLTTHSGNKPHKCPVCGKAF 429
K HL T G + H C CG+ F
Sbjct: 160 YKAHLKT-CGTRGHSCD-CGRVF 180
Score = 31.1 bits (67), Expect = 0.40
Identities = 24/103 (23%), Positives = 39/103 (37%), Gaps = 1/103 (0%)
Frame = +1
Query: 151 YTCDTCGKAFYELNVLRAHKLTHSEKRFACKLCEKAFHTKINLREHVAMHLDEKLFQ-CD 327
Y C+ C + F L+ H+ H + KL ++ + ++ R +V C
Sbjct: 67 YICEICNQGFQRDQNLQMHRRRH---KVPWKLLKRDNNIEVKKRVYVCPEPTCLHHNPCH 123
Query: 328 ECGKGFNIKNHLKYHLTTHSGNKPHKCPVCGKAFRSTHDLEIH 456
G IK H + HS +K C C K + D + H
Sbjct: 124 ALGDLVGIKKHFR---RKHSNHKQWVCERCSKGYAVQSDYKAH 163
>At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domains PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1354
Score = 40.7 bits (91), Expect = 5e-04
Identities = 36/117 (30%), Positives = 49/117 (41%), Gaps = 7/117 (5%)
Frame = +1
Query: 76 CNKVFSSLARLRQHKKTHDRNRTRNYTCDTCGKAFYELNVLRAHKLTHSEKR-FAC--KL 246
C FSS +L HK RN CGK F+ L H+ HS+ R C K
Sbjct: 1244 CTMSFSSEKQLMLHK----RNIC---PIKGCGKNFFSHKYLVQHQRVHSDDRPLKCPWKG 1296
Query: 247 CEKAFHTKINLREHVAMHLDEKLFQCDE--CGKGFNIKNHLKYH--LTTHSGNKPHK 405
C+ F + EH+ +H + + C E CG+ F + H T HS K +K
Sbjct: 1297 CKMTFKWAWSRTEHIRVHTGARPYVCAEPDCGQTFRFVSDFSRHKRKTGHSVKKTNK 1353
Score = 32.7 bits (71), Expect = 0.13
Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Frame = +1
Query: 331 CGKGFNIKNHLKYHLTTHSGNKPHKCP--VCGKAFRSTHDLEIHSHQHT 471
CGK F +L H HS ++P KCP C F+ H HT
Sbjct: 1267 CGKNFFSHKYLVQHQRVHSDDRPLKCPWKGCKMTFKWAWSRTEHIRVHT 1315
>At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3)
identical to WIP3 protein [Arabidopsis thaliana]
gi|18027014|gb|AAL55723; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 40.7 bits (91), Expect = 5e-04
Identities = 28/79 (35%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = +1
Query: 172 KAFYELNVLRAH-KLTHSEKRFACKLCEKAFHTKINLREHVAMHLDEKLFQCDECGKGFN 348
K + L+ H K H K F+C C KA K + R H KL+ C CG F
Sbjct: 244 KPLKDFRTLQTHYKRKHGSKPFSCGKCGKALAVKGDWRTHEKN--CGKLWYC-TCGSDFK 300
Query: 349 IKNHLKYHLTTH-SGNKPH 402
K LK H+ + SG+ PH
Sbjct: 301 HKRSLKDHIRSFGSGHSPH 319
Score = 31.9 bits (69), Expect = 0.23
Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +1
Query: 271 INLREHVAMHLDEKLFQCDE--CGKGFNIKNHLKYHLTTHSGNKPHKCPVCGKAFRSTHD 444
+ +++ M DE++ D CGK F I + + H+ G C +C K F ++
Sbjct: 139 VMMKKRRKMKFDEEIIDSDVEVCGKRFWIPSPAQIHV----GPMQFACSICSKTFNRYNN 194
Query: 445 LEIHSHQH 468
+++H H
Sbjct: 195 MQMHMWGH 202
Score = 30.7 bits (66), Expect = 0.53
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +1
Query: 160 DTCGKAFYELNVLRAHKLTHSEKRFACKLCEKAFHTKINLREHVAMHLDE 309
+ CGK F+ + + H +FAC +C K F+ N++ H+ H E
Sbjct: 159 EVCGKRFWIPSPAQIHV---GPMQFACSICSKTFNRYNNMQMHMWGHGSE 205
>At3g60580.1 68416.m06777 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 288
Score = 40.3 bits (90), Expect = 7e-04
Identities = 25/87 (28%), Positives = 37/87 (42%)
Frame = +1
Query: 40 RSLTEADLTCAVCNKVFSSLARLRQHKKTHDRNRTRNYTCDTCGKAFYELNVLRAHKLTH 219
R+ T+ C C KVF S L H+ +H +NR N + + Y+ NV+ K H
Sbjct: 166 RATTKGRYKCETCGKVFKSYQALGGHRASHKKNRVSNNKTEQRSETEYD-NVVVVAKRIH 224
Query: 220 SEKRFACKLCEKAFHTKINLREHVAMH 300
C +C + F + L H H
Sbjct: 225 E-----CPICLRVFASGQALGGHKRSH 246
Score = 36.7 bits (81), Expect = 0.008
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +1
Query: 151 YTCDTCGKAFYELNVLRAHKLTHSEKRFACKLCEKAFHTKINLREHVAMHLDEKLFQCDE 330
Y C+TCGK F L H+ +H + R + E+ T+ ++V + + +++ +C
Sbjct: 173 YKCETCGKVFKSYQALGGHRASHKKNRVSNNKTEQRSETEY---DNVVV-VAKRIHECPI 228
Query: 331 CGKGFNIKNHLKYHLTTHS-GN 393
C + F L H +H GN
Sbjct: 229 CLRVFASGQALGGHKRSHGVGN 250
Score = 32.3 bits (70), Expect = 0.17
Identities = 19/80 (23%), Positives = 31/80 (38%)
Frame = +1
Query: 229 RFACKLCEKAFHTKINLREHVAMHLDEKLFQCDECGKGFNIKNHLKYHLTTHSGNKPHKC 408
R+ C+ C K F + L H A H ++ ++ +Y + H+C
Sbjct: 172 RYKCETCGKVFKSYQALGGHRASHKKNRV-----SNNKTEQRSETEYDNVVVVAKRIHEC 226
Query: 409 PVCGKAFRSTHDLEIHSHQH 468
P+C + F S L H H
Sbjct: 227 PICLRVFASGQALGGHKRSH 246
>At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 452
Score = 40.3 bits (90), Expect = 7e-04
Identities = 33/139 (23%), Positives = 56/139 (40%), Gaps = 1/139 (0%)
Frame = +1
Query: 16 QFISTRPARSLTEADLTCAVCNKVFSSLARLRQHKKTHDRN-RTRNYTCDTCGKAFYELN 192
+ I+ P L C +CNK F L+ H++ H+ + R + K Y
Sbjct: 48 EVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQKSNKEVKKKVY--- 104
Query: 193 VLRAHKLTHSEKRFACKLCEKAFHTKINLREHVAMHLDEKLFQCDECGKGFNIKNHLKYH 372
V H + +A +++H EK ++CD+C K + +++ K H
Sbjct: 105 VCPEVSCVHHDP-------SRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAH 157
Query: 373 LTTHSGNKPHKCPVCGKAF 429
+ G K +KC CG F
Sbjct: 158 -SKICGTKEYKCD-CGTLF 174
>At3g46070.1 68416.m04985 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 170
Score = 40.3 bits (90), Expect = 7e-04
Identities = 32/108 (29%), Positives = 44/108 (40%)
Frame = +1
Query: 145 RNYTCDTCGKAFYELNVLRAHKLTHSEKRFACKLCEKAFHTKINLREHVAMHLDEKLFQC 324
R+ T DT L+ + H ++ F CK CE+ F + L H A H KL
Sbjct: 8 RDLTVDTAASCLMLLSGIGEHD-GRKKRVFRCKTCERDFDSFQALGGHRASH--SKLTNS 64
Query: 325 DECGKGFNIKNHLKYHLTTHSGNKPHKCPVCGKAFRSTHDLEIHSHQH 468
D+ + K K TT + H CP+CG F L H +H
Sbjct: 65 DDKSLPGSPKKKPKTTTTTTA----HTCPICGLEFPMGQALGGHMRKH 108
Score = 30.3 bits (65), Expect = 0.70
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 127 HDRNRTRNYTCDTCGKAFYELNVLRAHKLTHSE 225
HD + R + C TC + F L H+ +HS+
Sbjct: 28 HDGRKKRVFRCKTCERDFDSFQALGGHRASHSK 60
>At5g04390.1 68418.m00431 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 362
Score = 39.9 bits (89), Expect = 9e-04
Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 1/107 (0%)
Frame = +1
Query: 151 YTCDTCGKAFYELNVLRAHKLTHSEKRFACKLCEKAFHTKINLREHV-AMHLDEKLFQCD 327
Y C TC + F L H+ +H + + A +F++ ++L+++ A +
Sbjct: 153 YQCKTCDRTFPSFQALGGHRASHKKPKAA------SFYSNLDLKKNTYANDAVSLVHTTT 206
Query: 328 ECGKGFNIKNHLKYHLTTHSGNKPHKCPVCGKAFRSTHDLEIHSHQH 468
K N ++ + Y S NK H+C +CG F S L H +H
Sbjct: 207 TVFKNNNSRSLVVYGKA--SKNKVHECGICGAEFTSGQALGGHMRRH 251
>At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 324
Score = 39.9 bits (89), Expect = 9e-04
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 8/104 (7%)
Frame = +1
Query: 121 KTHDRNRTRNYTCDTCGKAFYELNV---LRAHKLTHSEKRFACKL--CEKAFHTKINLRE 285
K+H R+ ++ C+ CG + N+ LR H S C++ C F NL++
Sbjct: 177 KSHIRSCHQHINCEICGSKHLKKNIKRHLRTHDEDSSPGEIKCEVEGCSSTFSKASNLQK 236
Query: 286 HV-AMHLDEKLFQC--DECGKGFNIKNHLKYHLTTHSGNKPHKC 408
H+ A+H D + F C CG F K+ H +SG + C
Sbjct: 237 HMKAVHDDIRPFVCGFPGCGMRFAYKHVRNKH--ENSGYHVYTC 278
Score = 35.9 bits (79), Expect = 0.014
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +1
Query: 307 EKLFQC--DECGKGFNIKNHLKYHLTTHSGNKPHKCP 411
E+ F C D+C + K+HL HL TH G K KCP
Sbjct: 3 ERSFTCYVDDCAASYRRKDHLNRHLLTHKG-KLFKCP 38
Score = 35.5 bits (78), Expect = 0.019
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Frame = +1
Query: 145 RNYTC--DTCGKAFYELNVLRAHKLTHSEKRFAC--KLCEKAFHTKINLREHVAMHLDEK 312
R++TC D C ++ + L H LTH K F C + C+ F + N+ HV +
Sbjct: 4 RSFTCYVDDCAASYRRKDHLNRHLLTHKGKLFKCPKENCKSEFSVQGNVGRHVKKYHSND 63
Query: 313 LFQCDECGKGFNIKNH 360
D G G K++
Sbjct: 64 NRDKDNTGLGDGDKDN 79
>At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 446
Score = 39.5 bits (88), Expect = 0.001
Identities = 36/139 (25%), Positives = 58/139 (41%), Gaps = 20/139 (14%)
Frame = +1
Query: 16 QFISTRPARSLTEADLTCAVCNKVFSSLARLRQHKKTHD-----RNRTRN-------YTC 159
+ I+ P +T C VCNK F L+ H++ H+ + RT Y C
Sbjct: 53 EVIALSPNSLMTTNRFICEVCNKGFKRDQNLQLHRRGHNLPWKLKQRTNKEQVKKKVYIC 112
Query: 160 --DTC-----GKAFYELNVLRAH-KLTHSEKRFACKLCEKAFHTKINLREHVAMHLDEKL 315
TC +A +L ++ H H EK++ C C K + + + H + K
Sbjct: 113 PEKTCVHHDPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVMSDWKAHSKI-CGTKE 171
Query: 316 FQCDECGKGFNIKNHLKYH 372
++CD CG F+ K+ H
Sbjct: 172 YRCD-CGTLFSRKDSFITH 189
Score = 35.5 bits (78), Expect = 0.019
Identities = 23/106 (21%), Positives = 41/106 (38%)
Frame = +1
Query: 142 TRNYTCDTCGKAFYELNVLRAHKLTHSEKRFACKLCEKAFHTKINLREHVAMHLDEKLFQ 321
T + C+ C K F L+ H+ H+ KL ++ ++ + ++ EK
Sbjct: 65 TNRFICEVCNKGFKRDQNLQLHRRGHN---LPWKLKQRTNKEQVKKKVYIC---PEKTCV 118
Query: 322 CDECGKGFNIKNHLKYHLTTHSGNKPHKCPVCGKAFRSTHDLEIHS 459
+ + +K H + G K KC C K + D + HS
Sbjct: 119 HHDPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVMSDWKAHS 164
>At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein
similar to finger protein pcp1 GB:S48856 from [Solanum
tuberosum] contains Pfam domain, PF00096: Zinc finger,
C2H2 type
Length = 513
Score = 39.5 bits (88), Expect = 0.001
Identities = 32/138 (23%), Positives = 55/138 (39%)
Frame = +1
Query: 16 QFISTRPARSLTEADLTCAVCNKVFSSLARLRQHKKTHDRNRTRNYTCDTCGKAFYELNV 195
+ I+ P + C +CNK F L+ H++ H N ++ E V
Sbjct: 84 EVIALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGH------NLPWKLKQRSNKE--V 135
Query: 196 LRAHKLTHSEKRFACKLCEKAFHTKINLREHVAMHLDEKLFQCDECGKGFNIKNHLKYHL 375
+R E +A +++H EK ++CD+C K + +++ K H
Sbjct: 136 IRKKVYVCPEASCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDCKAHS 195
Query: 376 TTHSGNKPHKCPVCGKAF 429
T G K ++C CG F
Sbjct: 196 KT-CGTKEYRCD-CGTLF 211
Score = 33.5 bits (73), Expect = 0.075
Identities = 25/106 (23%), Positives = 41/106 (38%)
Frame = +1
Query: 142 TRNYTCDTCGKAFYELNVLRAHKLTHSEKRFACKLCEKAFHTKINLREHVAMHLDEKLFQ 321
T + C+ C K F L+ H+ H+ KL +++ K +R+ V + +
Sbjct: 96 TNRFVCEICNKGFQRDQNLQLHRRGHN---LPWKLKQRS--NKEVIRKKVYVCPEASCVH 150
Query: 322 CDECGKGFNIKNHLKYHLTTHSGNKPHKCPVCGKAFRSTHDLEIHS 459
D + +K H G K KC C K + D + HS
Sbjct: 151 HDP-SRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDCKAHS 195
>At2g45120.1 68415.m05615 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 314
Score = 39.5 bits (88), Expect = 0.001
Identities = 26/93 (27%), Positives = 41/93 (44%)
Frame = +1
Query: 115 HKKTHDRNRTRNYTCDTCGKAFYELNVLRAHKLTHSEKRFACKLCEKAFHTKINLREHVA 294
+K + R R + C+TCGK F L H+ +H +K AC + T E+V
Sbjct: 185 YKSSKSRGR---FKCETCGKVFKSYQALGGHRASH-KKNKACMTKTEQVET-----EYVL 235
Query: 295 MHLDEKLFQCDECGKGFNIKNHLKYHLTTHSGN 393
++K+ +C C + F L H +H N
Sbjct: 236 GVKEKKVHECPICFRVFTSGQALGGHKRSHGSN 268
Score = 35.5 bits (78), Expect = 0.019
Identities = 26/88 (29%), Positives = 36/88 (40%)
Frame = +1
Query: 205 HKLTHSEKRFACKLCEKAFHTKINLREHVAMHLDEKLFQCDECGKGFNIKNHLKYHLTTH 384
+K + S RF C+ C K F + L H A H K K ++ +Y L
Sbjct: 185 YKSSKSRGRFKCETCGKVFKSYQALGGHRASHKKNKACMT----KTEQVET--EYVLGVK 238
Query: 385 SGNKPHKCPVCGKAFRSTHDLEIHSHQH 468
K H+CP+C + F S L H H
Sbjct: 239 E-KKVHECPICFRVFTSGQALGGHKRSH 265
Score = 26.6 bits (56), Expect = 8.6
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 67 CAVCNKVFSSLARLRQHKKTHDRN 138
C +C +VF+S L HK++H N
Sbjct: 245 CPICFRVFTSGQALGGHKRSHGSN 268
>At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 500
Score = 39.1 bits (87), Expect = 0.002
Identities = 31/139 (22%), Positives = 56/139 (40%), Gaps = 1/139 (0%)
Frame = +1
Query: 16 QFISTRPARSLTEADLTCAVCNKVFSSLARLRQHKKTHDRN-RTRNYTCDTCGKAFYELN 192
+ I+ P + C +CNK F L+ H++ H+ + R + K Y
Sbjct: 46 EVIALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTKEVRKKVY--- 102
Query: 193 VLRAHKLTHSEKRFACKLCEKAFHTKINLREHVAMHLDEKLFQCDECGKGFNIKNHLKYH 372
V H + +A +++H EK ++C++C K + +++ K H
Sbjct: 103 VCPVSGCVHHDP-------SRALGDLTGIKKHFCRKHGEKKWKCEKCSKKYAVQSDWKAH 155
Query: 373 LTTHSGNKPHKCPVCGKAF 429
+ G K +KC CG F
Sbjct: 156 -SKICGTKEYKCD-CGTLF 172
Score = 30.7 bits (66), Expect = 0.53
Identities = 25/104 (24%), Positives = 37/104 (35%), Gaps = 20/104 (19%)
Frame = +1
Query: 208 KLTHSEKRFACKLCEKAFHTKINLREHVAMH-------------LDEKLFQCDECG---- 336
K + RF C++C K F NL+ H H + +K++ C G
Sbjct: 53 KTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTKEVRKKVYVCPVSGCVHH 112
Query: 337 ---KGFNIKNHLKYHLTTHSGNKPHKCPVCGKAFRSTHDLEIHS 459
+ +K H G K KC C K + D + HS
Sbjct: 113 DPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKKYAVQSDWKAHS 156
>At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4)
identical to WIP4 protein [Arabidopsis thaliana]
gi|18376500|emb|CAC86168; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 412
Score = 39.1 bits (87), Expect = 0.002
Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
Frame = +1
Query: 184 ELNVLRAH-KLTHSEKRFACKLCEKAFHTKINLREHVAMHLDEKLFQCDECGKGFNIKNH 360
+ L+ H K H + FAC+ C KAF K + R H KL+ C CG F K
Sbjct: 323 DFRTLQTHYKRKHGVRPFACRRCGKAFAVKGDWRTHEKN--CGKLWYC-SCGSDFKHKRS 379
Query: 361 LKYHLTTHSGNKPHKCPVCGKAFRSTHDLE 450
LK H+ C + + + D+E
Sbjct: 380 LKDHVKAFGNGHVPCCGIDHEEEEAASDVE 409
Score = 29.9 bits (64), Expect = 0.92
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +1
Query: 121 KTHDRNR--TRNYTCDTCGKAFYELNVLRAHKLTHSEKRFACKLCEKAFHTKINLREHV 291
+TH + + R + C CGKAF R H+ + K + C C F K +L++HV
Sbjct: 328 QTHYKRKHGVRPFACRRCGKAFAVKGDWRTHE-KNCGKLWYCS-CGSDFKHKRSLKDHV 384
>At1g27730.1 68414.m03389 zinc finger (C2H2 type) family protein
(ZAT10) / salt-tolerance zinc finger protein (STZ)
identical to salt-tolerance zinc finger protein
GB:CAA64820 GI:1565227 from [Arabidopsis thaliana];
contains Pfam domain, PF00096: Zinc finger, C2H2 type;
identical to cDNA zinc finger protein STZ/ZAT10
(STZ/ZAT10) GI:9965730
Length = 227
Score = 39.1 bits (87), Expect = 0.002
Identities = 24/91 (26%), Positives = 39/91 (42%)
Frame = +1
Query: 34 PARSLTEADLTCAVCNKVFSSLARLRQHKKTHDRNRTRNYTCDTCGKAFYELNVLRAHKL 213
P ++ + C+VC+K FSS L HK +H +N ++ + + A
Sbjct: 71 PPPAVEKLSYKCSVCDKTFSSYQALGGHKASHRKNLSQTLSGGGDDHSTSSATTTSA-VT 129
Query: 214 THSEKRFACKLCEKAFHTKINLREHVAMHLD 306
T S K C +C K+F + L H H +
Sbjct: 130 TGSGKSHVCTICNKSFPSGQALGGHKRCHYE 160
Score = 35.1 bits (77), Expect = 0.024
Identities = 20/79 (25%), Positives = 28/79 (35%)
Frame = +1
Query: 232 FACKLCEKAFHTKINLREHVAMHLDEKLFQCDECGKGFNIKNHLKYHLTTHSGNKPHKCP 411
+ C +C+K F + L H A H G + + T K H C
Sbjct: 80 YKCSVCDKTFSSYQALGGHKASHRKNLSQTLSGGGDDHSTSSATTTSAVTTGSGKSHVCT 139
Query: 412 VCGKAFRSTHDLEIHSHQH 468
+C K+F S L H H
Sbjct: 140 ICNKSFPSGQALGGHKRCH 158
>At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 503
Score = 38.7 bits (86), Expect = 0.002
Identities = 33/137 (24%), Positives = 59/137 (43%), Gaps = 20/137 (14%)
Frame = +1
Query: 22 ISTRPARSLTEADLTCAVCNKVFSSLARLRQHKKTHD-----RNRTRN-------YTC-- 159
I+ P + C +CNK F L+ H++ H+ + R++ Y C
Sbjct: 69 IALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRSKQEVIKKKVYICPI 128
Query: 160 DTC-----GKAFYELNVLRAH-KLTHSEKRFACKLCEKAFHTKINLREHVAMHLDEKLFQ 321
TC +A +L ++ H H EK++ C+ C K + + + + H A + ++
Sbjct: 129 KTCVHHDASRALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAH-AKTCGTREYK 187
Query: 322 CDECGKGFNIKNHLKYH 372
CD CG F+ K+ H
Sbjct: 188 CD-CGTLFSRKDSFITH 203
Score = 32.3 bits (70), Expect = 0.17
Identities = 22/106 (20%), Positives = 40/106 (37%)
Frame = +1
Query: 142 TRNYTCDTCGKAFYELNVLRAHKLTHSEKRFACKLCEKAFHTKINLREHVAMHLDEKLFQ 321
T + C+ C K F L+ H+ H+ KL +++ I + ++ K
Sbjct: 79 TNRFVCEICNKGFQRDQNLQLHRRGHN---LPWKLKQRSKQEVIKKKVYIC---PIKTCV 132
Query: 322 CDECGKGFNIKNHLKYHLTTHSGNKPHKCPVCGKAFRSTHDLEIHS 459
+ + +K H + G K KC C K + D + H+
Sbjct: 133 HHDASRALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHA 178
>At2g28200.1 68415.m03424 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 284
Score = 38.3 bits (85), Expect = 0.003
Identities = 28/126 (22%), Positives = 46/126 (36%), Gaps = 5/126 (3%)
Frame = +1
Query: 106 LRQHKKTHDRNRTRN-----YTCDTCGKAFYELNVLRAHKLTHSEKRFACKLCEKAFHTK 270
L+ +K H + + N Y C TC + F L H+ +H + R + + EK
Sbjct: 93 LKNSRKIHQKISSENSSFYVYECKTCNRTFSSFQALGGHRASHKKPRTSTE--EKTRLPL 150
Query: 271 INLREHVAMHLDEKLFQCDECGKGFNIKNHLKYHLTTHSGNKPHKCPVCGKAFRSTHDLE 450
+ + F+ N + + NK H+C +CG F S L
Sbjct: 151 TQPKSSASEEGQNSHFKVSGSALASQASNII------NKANKVHECSICGSEFTSGQALG 204
Query: 451 IHSHQH 468
H +H
Sbjct: 205 GHMRRH 210
Score = 29.9 bits (64), Expect = 0.92
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 67 CAVCNKVFSSLARLRQHKKTHDRNRT 144
C CN+ FSS L H+ +H + RT
Sbjct: 115 CKTCNRTFSSFQALGGHRASHKKPRT 140
>At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 602
Score = 37.9 bits (84), Expect = 0.003
Identities = 30/138 (21%), Positives = 55/138 (39%)
Frame = +1
Query: 16 QFISTRPARSLTEADLTCAVCNKVFSSLARLRQHKKTHDRNRTRNYTCDTCGKAFYELNV 195
+ I+ P + C VCNK F L+ H++ H N + + ++ +
Sbjct: 66 EVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGH--NLPWKLKQKSTKEVKRKVYL 123
Query: 196 LRAHKLTHSEKRFACKLCEKAFHTKINLREHVAMHLDEKLFQCDECGKGFNIKNHLKYHL 375
H + +A +++H EK ++CD+C K + +++ K H
Sbjct: 124 CPEPSCVHHDP-------SRALGDLTGIKKHYYRKHGEKKWKCDKCSKRYAVQSDWKAHS 176
Query: 376 TTHSGNKPHKCPVCGKAF 429
T G K ++C CG F
Sbjct: 177 KT-CGTKEYRCD-CGTLF 192
Score = 32.3 bits (70), Expect = 0.17
Identities = 27/107 (25%), Positives = 38/107 (35%), Gaps = 1/107 (0%)
Frame = +1
Query: 142 TRNYTCDTCGKAFYELNVLRAHKLTHSEKRFACKLCEKAFHTKINL-REHVAMHLDEKLF 318
T + C+ C K F L+ H+ H+ + K K+ L E +H D
Sbjct: 78 TNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEVKRKVYLCPEPSCVHHDPSRA 137
Query: 319 QCDECGKGFNIKNHLKYHLTTHSGNKPHKCPVCGKAFRSTHDLEIHS 459
D G +K H G K KC C K + D + HS
Sbjct: 138 LGDLTG--------IKKHYYRKHGEKKWKCDKCSKRYAVQSDWKAHS 176
Score = 27.1 bits (57), Expect = 6.5
Identities = 15/72 (20%), Positives = 31/72 (43%)
Frame = +1
Query: 79 NKVFSSLARLRQHKKTHDRNRTRNYTCDTCGKAFYELNVLRAHKLTHSEKRFACKLCEKA 258
++ L +++H + ++ + + CD C K + + +AH T K + C C
Sbjct: 135 SRALGDLTGIKKHY--YRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTKEYRCD-CGTL 191
Query: 259 FHTKINLREHVA 294
F + + H A
Sbjct: 192 FSRRDSFITHRA 203
>At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 455
Score = 37.9 bits (84), Expect = 0.003
Identities = 30/121 (24%), Positives = 49/121 (40%)
Frame = +1
Query: 67 CAVCNKVFSSLARLRQHKKTHDRNRTRNYTCDTCGKAFYELNVLRAHKLTHSEKRFACKL 246
C VCNK F L+ HK+ H+ + +V+R E
Sbjct: 94 CEVCNKGFQRDQNLQLHKRGHNLPWKLKQRSNK--------DVVRKKVYVCPEPGCVHHH 145
Query: 247 CEKAFHTKINLREHVAMHLDEKLFQCDECGKGFNIKNHLKYHLTTHSGNKPHKCPVCGKA 426
+A +++H EK ++C++C K + +++ K H T G K +KC CG
Sbjct: 146 PSRALGDLTGIKKHFFRKHGEKKWKCEKCSKKYAVQSDWKAHAKT-CGTKEYKCD-CGTL 203
Query: 427 F 429
F
Sbjct: 204 F 204
Score = 29.9 bits (64), Expect = 0.92
Identities = 25/105 (23%), Positives = 38/105 (36%), Gaps = 21/105 (20%)
Frame = +1
Query: 208 KLTHSEKRFACKLCEKAFHTKINLREHVAMH--------------LDEKLFQCDECG--- 336
K + RF C++C K F NL+ H H + +K++ C E G
Sbjct: 84 KTLMATNRFICEVCNKGFQRDQNLQLHKRGHNLPWKLKQRSNKDVVRKKVYVCPEPGCVH 143
Query: 337 ----KGFNIKNHLKYHLTTHSGNKPHKCPVCGKAFRSTHDLEIHS 459
+ +K H G K KC C K + D + H+
Sbjct: 144 HHPSRALGDLTGIKKHFFRKHGEKKWKCEKCSKKYAVQSDWKAHA 188
>At1g34370.2 68414.m04268 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 499
Score = 37.5 bits (83), Expect = 0.005
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +1
Query: 187 LNVLRAHKLTHSEKRFACKLCE-KAFHTKINLREHVAMHLDEKLFQCDECGKGFNIKNHL 363
L V +K TH +K F C C K F +L+ H H + + C CG F+ K+ L
Sbjct: 318 LCVKNHYKRTHCDKSFTCSRCHTKKFSVIADLKTH-EKHCGKNKWLC-SCGTTFSRKDKL 375
Query: 364 KYHLTTHSGNKP 399
H+ G+ P
Sbjct: 376 FGHIALFQGHTP 387
Score = 29.1 bits (62), Expect = 1.6
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +1
Query: 181 YELNVLRAHKLTHSEKRFACKLCEKAFHTKINLREHVAMHLDE 309
YE+ L ++ F C +C K F NLR H+ H DE
Sbjct: 228 YEILQLEKEEILAPHTHF-CTICGKGFKRDANLRMHMRGHGDE 269
Score = 27.9 bits (59), Expect = 3.7
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 400 HKCPVCGKAFRSTHDLEIHSHQH 468
H C +CGK F+ +L +H H
Sbjct: 244 HFCTICGKGFKRDANLRMHMRGH 266
Score = 27.9 bits (59), Expect = 3.7
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +1
Query: 40 RSLTEADLTCAVCN-KVFSSLARLRQHKKTHDRNRTRNYTCDTCGKAFYELNVLRAH 207
R+ + TC+ C+ K FS +A L KTH+++ +N +CG F + L H
Sbjct: 326 RTHCDKSFTCSRCHTKKFSVIADL----KTHEKHCGKNKWLCSCGTTFSRKDKLFGH 378
>At1g34370.1 68414.m04267 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 499
Score = 37.5 bits (83), Expect = 0.005
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +1
Query: 187 LNVLRAHKLTHSEKRFACKLCE-KAFHTKINLREHVAMHLDEKLFQCDECGKGFNIKNHL 363
L V +K TH +K F C C K F +L+ H H + + C CG F+ K+ L
Sbjct: 318 LCVKNHYKRTHCDKSFTCSRCHTKKFSVIADLKTH-EKHCGKNKWLC-SCGTTFSRKDKL 375
Query: 364 KYHLTTHSGNKP 399
H+ G+ P
Sbjct: 376 FGHIALFQGHTP 387
Score = 29.1 bits (62), Expect = 1.6
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +1
Query: 181 YELNVLRAHKLTHSEKRFACKLCEKAFHTKINLREHVAMHLDE 309
YE+ L ++ F C +C K F NLR H+ H DE
Sbjct: 228 YEILQLEKEEILAPHTHF-CTICGKGFKRDANLRMHMRGHGDE 269
Score = 27.9 bits (59), Expect = 3.7
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 400 HKCPVCGKAFRSTHDLEIHSHQH 468
H C +CGK F+ +L +H H
Sbjct: 244 HFCTICGKGFKRDANLRMHMRGH 266
Score = 27.9 bits (59), Expect = 3.7
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +1
Query: 40 RSLTEADLTCAVCN-KVFSSLARLRQHKKTHDRNRTRNYTCDTCGKAFYELNVLRAH 207
R+ + TC+ C+ K FS +A L KTH+++ +N +CG F + L H
Sbjct: 326 RTHCDKSFTCSRCHTKKFSVIADL----KTHEKHCGKNKWLCSCGTTFSRKDKLFGH 378
>At1g34790.1 68414.m04337 transparent testa 1 protein (TT1) / zinc
finger (C2H2 type) protein TT1 identical to transparent
testa 1 GI:18253279 from [Arabidopsis thaliana];
contains Pfam profile PF00096: Zinc finger, C2H2 type
Length = 303
Score = 37.1 bits (82), Expect = 0.006
Identities = 28/88 (31%), Positives = 38/88 (43%), Gaps = 2/88 (2%)
Frame = +1
Query: 145 RNYTCDTCGKAFYELNVLRAH-KLTHSEKRFACKLCEKAFHTKINLREHVAMHLDEKLFQ 321
RN+ K + L+ H K H K F+C+LC K K + R H K +
Sbjct: 199 RNHIDHPRSKPLKDFRTLQTHYKRKHGHKPFSCRLCGKLLAVKGDWRTHEKN--CGKRWV 256
Query: 322 CDECGKGFNIKNHLKYHLTTH-SGNKPH 402
C CG F K LK H+ SG+ P+
Sbjct: 257 C-VCGSDFKHKRSLKDHVKAFGSGHGPY 283
Score = 26.6 bits (56), Expect = 8.6
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = +1
Query: 361 LKYHLTTHSGNKPHKCPVCGKAFRSTHDLEIH 456
L+ H G+KP C +CGK D H
Sbjct: 216 LQTHYKRKHGHKPFSCRLCGKLLAVKGDWRTH 247
>At5g60470.1 68418.m07584 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 392
Score = 36.7 bits (81), Expect = 0.008
Identities = 24/106 (22%), Positives = 41/106 (38%)
Frame = +1
Query: 142 TRNYTCDTCGKAFYELNVLRAHKLTHSEKRFACKLCEKAFHTKINLREHVAMHLDEKLFQ 321
T + C+ C K F L+ HK H+ KL +K ++ + ++ EK
Sbjct: 3 TNRFFCEICNKGFQREQNLQLHKRGHN---LPWKLKQKTNKNQVKKKVYIC---PEKSCV 56
Query: 322 CDECGKGFNIKNHLKYHLTTHSGNKPHKCPVCGKAFRSTHDLEIHS 459
+ + +K H + G K KC C K + D + H+
Sbjct: 57 HHDPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVISDWKAHN 102
Score = 33.5 bits (73), Expect = 0.075
Identities = 29/121 (23%), Positives = 48/121 (39%)
Frame = +1
Query: 67 CAVCNKVFSSLARLRQHKKTHDRNRTRNYTCDTCGKAFYELNVLRAHKLTHSEKRFACKL 246
C +CNK F L+ HK+ H N K N ++ EK
Sbjct: 8 CEICNKGFQREQNLQLHKRGH------NLPWKLKQKT--NKNQVKKKVYICPEKSCVHHD 59
Query: 247 CEKAFHTKINLREHVAMHLDEKLFQCDECGKGFNIKNHLKYHLTTHSGNKPHKCPVCGKA 426
+A +++H + EK ++CD+C K + + + K H G++ +C CG
Sbjct: 60 PARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVISDWKAH-NKICGSREFRCD-CGTL 117
Query: 427 F 429
F
Sbjct: 118 F 118
Score = 27.1 bits (57), Expect = 6.5
Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 1/66 (1%)
Frame = +1
Query: 94 SLARLRQHKKTHDRNR-TRNYTCDTCGKAFYELNVLRAHKLTHSEKRFACKLCEKAFHTK 270
+L L KK R + + CD C K + ++ +AH + F C C F K
Sbjct: 63 ALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVISDWKAHNKICGSREFRCD-CGTLFSRK 121
Query: 271 INLREH 288
+ H
Sbjct: 122 DSFISH 127
>At5g44160.1 68418.m05404 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 466
Score = 36.7 bits (81), Expect = 0.008
Identities = 29/117 (24%), Positives = 49/117 (41%), Gaps = 21/117 (17%)
Frame = +1
Query: 142 TRNYTCDTCGKAFYELNVLRAHKLTHS-------------EKR-FAC--KLC-----EKA 258
T + C+ CGK F L+ H+ H+ KR + C K C +A
Sbjct: 63 TNRFLCEVCGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKTCVHHHSSRA 122
Query: 259 FHTKINLREHVAMHLDEKLFQCDECGKGFNIKNHLKYHLTTHSGNKPHKCPVCGKAF 429
+++H EK + C++C K + +++ K H T G + ++C CG F
Sbjct: 123 LGDLTGIKKHFCRKHGEKKWTCEKCAKRYAVQSDWKAHSKT-CGTREYRCD-CGTIF 177
Score = 36.3 bits (80), Expect = 0.011
Identities = 33/138 (23%), Positives = 59/138 (42%), Gaps = 19/138 (13%)
Frame = +1
Query: 16 QFISTRPARSLTEADLTCAVCNKVFSSLARLRQHKKTHD-----RNRT------RNYTC- 159
+ I+ P + C VC K F L+ H++ H+ + RT R Y C
Sbjct: 51 EVIALSPTTLMATNRFLCEVCGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCP 110
Query: 160 -DTC-----GKAFYELNVLRAHKL-THSEKRFACKLCEKAFHTKINLREHVAMHLDEKLF 318
TC +A +L ++ H H EK++ C+ C K + + + + H + + +
Sbjct: 111 EKTCVHHHSSRALGDLTGIKKHFCRKHGEKKWTCEKCAKRYAVQSDWKAH-SKTCGTREY 169
Query: 319 QCDECGKGFNIKNHLKYH 372
+CD CG F+ ++ H
Sbjct: 170 RCD-CGTIFSRRDSFITH 186
Score = 28.3 bits (60), Expect = 2.8
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +1
Query: 376 TTHSGNKPHKCPVCGKAFRSTHDLEIHSHQH 468
TT C VCGK F+ +L++H H
Sbjct: 58 TTLMATNRFLCEVCGKGFQRDQNLQLHRRGH 88
>At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein
similar to zinc finger protein ID1 GB:AAC18941
GI:3170601 from [Zea mays] contains Pfam domain,
PF00096: Zinc finger, C2H2 type
Length = 467
Score = 36.7 bits (81), Expect = 0.008
Identities = 30/138 (21%), Positives = 55/138 (39%)
Frame = +1
Query: 16 QFISTRPARSLTEADLTCAVCNKVFSSLARLRQHKKTHDRNRTRNYTCDTCGKAFYELNV 195
+ I+ P + C VCNK F L+ H++ H N + + ++ +
Sbjct: 67 EVIALSPKTIMATNRFLCEVCNKGFQREQNLQLHRRGH--NLPWKLKQKSNKEVRRKVYL 124
Query: 196 LRAHKLTHSEKRFACKLCEKAFHTKINLREHVAMHLDEKLFQCDECGKGFNIKNHLKYHL 375
H + +A +++H EK ++CD+C K + +++ K H
Sbjct: 125 CPEPSCVHHDPA-------RALGDLTGIKKHYYRKHGEKKWKCDKCSKRYAVQSDWKAHS 177
Query: 376 TTHSGNKPHKCPVCGKAF 429
T G K ++C CG F
Sbjct: 178 KT-CGTKEYRCD-CGTIF 193
Score = 32.7 bits (71), Expect = 0.13
Identities = 27/107 (25%), Positives = 38/107 (35%), Gaps = 1/107 (0%)
Frame = +1
Query: 142 TRNYTCDTCGKAFYELNVLRAHKLTHSEKRFACKLCEKAFHTKINL-REHVAMHLDEKLF 318
T + C+ C K F L+ H+ H+ + K K+ L E +H D
Sbjct: 79 TNRFLCEVCNKGFQREQNLQLHRRGHNLPWKLKQKSNKEVRRKVYLCPEPSCVHHDPARA 138
Query: 319 QCDECGKGFNIKNHLKYHLTTHSGNKPHKCPVCGKAFRSTHDLEIHS 459
D G +K H G K KC C K + D + HS
Sbjct: 139 LGDLTG--------IKKHYYRKHGEKKWKCDKCSKRYAVQSDWKAHS 177
>At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein
similar to potato PCP1 zinc finger protein, GenBank
accession number X82328 contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 402
Score = 36.3 bits (80), Expect = 0.011
Identities = 32/141 (22%), Positives = 57/141 (40%), Gaps = 3/141 (2%)
Frame = +1
Query: 16 QFISTRPARSLTEADLTCAVCNKVFSSLARLRQHKKTHD---RNRTRNYTCDTCGKAFYE 186
+ I+ P L C +CNK F L+ H++ H+ + + +N K +
Sbjct: 67 EVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQKNTKEQQKKKVYVC 126
Query: 187 LNVLRAHKLTHSEKRFACKLCEKAFHTKINLREHVAMHLDEKLFQCDECGKGFNIKNHLK 366
AH H R A +++H EK ++C++C K + +++ K
Sbjct: 127 PETNCAH---HHPSR--------ALGDLTGIKKHFCRKHGEKKWKCEKCSKFYAVQSDWK 175
Query: 367 YHLTTHSGNKPHKCPVCGKAF 429
H T G + ++C CG F
Sbjct: 176 AH-TKICGTRDYRCD-CGTLF 194
Score = 30.7 bits (66), Expect = 0.53
Identities = 25/106 (23%), Positives = 40/106 (37%)
Frame = +1
Query: 142 TRNYTCDTCGKAFYELNVLRAHKLTHSEKRFACKLCEKAFHTKINLREHVAMHLDEKLFQ 321
T + C+ C K F L+ H+ H+ KL +K +TK ++ V + E
Sbjct: 79 TNRFVCEICNKGFQRDQNLQLHRRGHN---LPWKLKQK--NTKEQQKKKVYV-CPETNCA 132
Query: 322 CDECGKGFNIKNHLKYHLTTHSGNKPHKCPVCGKAFRSTHDLEIHS 459
+ +K H G K KC C K + D + H+
Sbjct: 133 HHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKFYAVQSDWKAHT 178
>At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 516
Score = 35.9 bits (79), Expect = 0.014
Identities = 32/138 (23%), Positives = 59/138 (42%), Gaps = 19/138 (13%)
Frame = +1
Query: 16 QFISTRPARSLTEADLTCAVCNKVFSSLARLRQHKKTHD------RNRTRN-----YTC- 159
+ ++ P + C VCNK F L+ H++ H+ + T+ Y C
Sbjct: 68 EVVALSPKTLMATNRFICDVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEVKRKVYLCP 127
Query: 160 -DTC-----GKAFYELNVLRAHKL-THSEKRFACKLCEKAFHTKINLREHVAMHLDEKLF 318
TC +A +L ++ H H EK++ C+ C K + + + + H + K +
Sbjct: 128 EPTCVHHDPSRALGDLTGIKKHYYRKHGEKKWKCEKCSKRYAVQSDWKAH-SKTCGTKEY 186
Query: 319 QCDECGKGFNIKNHLKYH 372
+CD CG F+ ++ H
Sbjct: 187 RCD-CGTIFSRRDSYITH 203
Score = 35.1 bits (77), Expect = 0.024
Identities = 28/117 (23%), Positives = 47/117 (40%), Gaps = 21/117 (17%)
Frame = +1
Query: 142 TRNYTCDTCGKAFYELNVLRAHKLTHS-----------EKRFACKLC----------EKA 258
T + CD C K F L+ H+ H+ E + LC +A
Sbjct: 80 TNRFICDVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEVKRKVYLCPEPTCVHHDPSRA 139
Query: 259 FHTKINLREHVAMHLDEKLFQCDECGKGFNIKNHLKYHLTTHSGNKPHKCPVCGKAF 429
+++H EK ++C++C K + +++ K H T G K ++C CG F
Sbjct: 140 LGDLTGIKKHYYRKHGEKKWKCEKCSKRYAVQSDWKAHSKT-CGTKEYRCD-CGTIF 194
>At5g67450.1 68418.m08504 zinc finger (C2H2 type) protein 1 (AZF1)
identical to Cys2/His2-type zinc finger protein 1
[Arabidopsis thaliana] gi|6009887|dbj|BAA85108
Length = 245
Score = 35.5 bits (78), Expect = 0.019
Identities = 25/93 (26%), Positives = 35/93 (37%), Gaps = 10/93 (10%)
Frame = +1
Query: 58 DLTCAVCNKVFSSLARLRQHKKTHDR----------NRTRNYTCDTCGKAFYELNVLRAH 207
D C VC K FSS L HK +H + N + G + V +
Sbjct: 96 DYKCTVCGKSFSSYQALGGHKTSHRKPTNTSITSGNQELSNNSHSNSGSVVINVTVNTGN 155
Query: 208 KLTHSEKRFACKLCEKAFHTKINLREHVAMHLD 306
++ S K C +C K+F + L H H D
Sbjct: 156 GVSQSGKIHTCSICFKSFASGQALGGHKRCHYD 188
Score = 31.1 bits (67), Expect = 0.40
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 145 RNYTCDTCGKAFYELNVLRAHKLTH 219
R+Y C CGK+F L HK +H
Sbjct: 95 RDYKCTVCGKSFSSYQALGGHKTSH 119
Score = 29.1 bits (62), Expect = 1.6
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 385 SGNKPHKCPVCGKAFRSTHDLEIHSHQH 468
S ++ +KC VCGK+F S L H H
Sbjct: 92 SDHRDYKCTVCGKSFSSYQALGGHKTSH 119
>At5g61470.1 68418.m07713 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 304
Score = 35.5 bits (78), Expect = 0.019
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +1
Query: 151 YTCDTCGKAFYELNVLRAHKLTHSEKRFACKLCEKAF 261
YTCDTCGK L H+ +H KR K+ +K +
Sbjct: 228 YTCDTCGKVLRSYQALGGHRTSHKYKRL--KISDKNY 262
Score = 28.7 bits (61), Expect = 2.1
Identities = 21/76 (27%), Positives = 27/76 (35%), Gaps = 16/76 (21%)
Frame = +1
Query: 40 RSLTEADLTCAVCNKVFSSLARLRQHKKTH--------DRNR--------TRNYTCDTCG 171
R ++ TC C KV S L H+ +H D+N R Y C C
Sbjct: 221 RGKKQSKYTCDTCGKVLRSYQALGGHRTSHKYKRLKISDKNYFGEDGPIVRRQYECQICN 280
Query: 172 KAFYELNVLRAHKLTH 219
+ F L HK H
Sbjct: 281 RMFASGQALGGHKKIH 296
>At5g04340.1 68418.m00426 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 238
Score = 35.5 bits (78), Expect = 0.019
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Frame = +1
Query: 67 CAVCNKVFSSLARLRQHKKTHDRNRTRNYTCDTCGKAFYELNVLRAHKLT----HSEKRF 234
C+VC+K FSS L HK +H ++ + T G + + ++ S K
Sbjct: 91 CSVCDKAFSSYQALGGHKASH--RKSFSLTQSAGGDELSTSSAITTSGISGGGGGSVKSH 148
Query: 235 ACKLCEKAFHTKINLREHVAMHLDEK 312
C +C K+F T L H H + K
Sbjct: 149 VCSICHKSFATGQALGGHKRCHYEGK 174
Score = 33.1 bits (72), Expect = 0.099
Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 5/84 (5%)
Frame = +1
Query: 232 FACKLCEKAFHTKINLREHVAMHLDEKLFQCDECGKGFNIKNHLKYHLTTHSGN-----K 396
+ C +C+KAF + L H A H K F + G + + SG K
Sbjct: 89 YKCSVCDKAFSSYQALGGHKASH--RKSFSLTQSAGGDELSTSSAITTSGISGGGGGSVK 146
Query: 397 PHKCPVCGKAFRSTHDLEIHSHQH 468
H C +C K+F + L H H
Sbjct: 147 SHVCSICHKSFATGQALGGHKRCH 170
Score = 27.5 bits (58), Expect = 4.9
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +1
Query: 151 YTCDTCGKAFYELNVLRAHKLTH 219
Y C C KAF L HK +H
Sbjct: 89 YKCSVCDKAFSSYQALGGHKASH 111
>At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein
contains Zinc finger,C2H2 type,domain contains Pfam
domain, PF00096: Zinc finger, C2H2 type
Length = 506
Score = 35.5 bits (78), Expect = 0.019
Identities = 29/139 (20%), Positives = 54/139 (38%), Gaps = 1/139 (0%)
Frame = +1
Query: 16 QFISTRPARSLTEADLTCAVCNKVFSSLARLRQHKKTHDRN-RTRNYTCDTCGKAFYELN 192
+ I+ P + C +C K F L+ H++ H+ + + T K Y
Sbjct: 55 EVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVY--- 111
Query: 193 VLRAHKLTHSEKRFACKLCEKAFHTKINLREHVAMHLDEKLFQCDECGKGFNIKNHLKYH 372
V H +A +++H EK ++C++C K + +++ K H
Sbjct: 112 VCPEKSCVHHHP-------TRALGDLTGIKKHFCRKHGEKKWKCEKCAKRYAVQSDWKAH 164
Query: 373 LTTHSGNKPHKCPVCGKAF 429
T G + ++C CG F
Sbjct: 165 SKT-CGTREYRCD-CGTIF 181
Score = 34.3 bits (75), Expect = 0.043
Identities = 27/106 (25%), Positives = 41/106 (38%)
Frame = +1
Query: 142 TRNYTCDTCGKAFYELNVLRAHKLTHSEKRFACKLCEKAFHTKINLREHVAMHLDEKLFQ 321
T + C+ CGK F L+ H+ H+ KL ++ T +R+ V + EK
Sbjct: 67 TNRFLCEICGKGFQRDQNLQLHRRGHN---LPWKLKQR---TSKEVRKRVYV-CPEKSCV 119
Query: 322 CDECGKGFNIKNHLKYHLTTHSGNKPHKCPVCGKAFRSTHDLEIHS 459
+ +K H G K KC C K + D + HS
Sbjct: 120 HHHPTRALGDLTGIKKHFCRKHGEKKWKCEKCAKRYAVQSDWKAHS 165
Score = 27.5 bits (58), Expect = 4.9
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +1
Query: 406 CPVCGKAFRSTHDLEIHSHQH 468
C +CGK F+ +L++H H
Sbjct: 72 CEICGKGFQRDQNLQLHRRGH 92
>At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2)
identical to WIP2 protein [Arabidopsis thaliana]
gi|18027012|gb|AAL55722; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 383
Score = 35.1 bits (77), Expect = 0.024
Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +1
Query: 172 KAFYELNVLRAH-KLTHSEKRFACKLCEKAFHTKINLREHVAMHLDEKLFQCDECGKGFN 348
K + L+ H K H K F C+ C KAF + + R H KL+ C CG F
Sbjct: 280 KPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKN--CGKLWYC-ICGSDFK 336
Query: 349 IKNHLKYHL 375
K LK H+
Sbjct: 337 HKRSLKDHI 345
Score = 28.7 bits (61), Expect = 2.1
Identities = 19/70 (27%), Positives = 32/70 (45%)
Frame = +1
Query: 82 KVFSSLARLRQHKKTHDRNRTRNYTCDTCGKAFYELNVLRAHKLTHSEKRFACKLCEKAF 261
K L+ H K ++ + + C CGKAF R H+ + K + C +C F
Sbjct: 280 KPLKDFRTLQTHYKR--KHGIKPFMCRKCGKAFAVRGDWRTHE-KNCGKLWYC-ICGSDF 335
Query: 262 HTKINLREHV 291
K +L++H+
Sbjct: 336 KHKRSLKDHI 345
Score = 27.9 bits (59), Expect = 3.7
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +1
Query: 361 LKYHLTTHSGNKPHKCPVCGKAFRSTHDLEIH 456
L+ H G KP C CGKAF D H
Sbjct: 288 LQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTH 319
>At3g49930.1 68416.m05460 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 215
Score = 34.7 bits (76), Expect = 0.032
Identities = 22/86 (25%), Positives = 33/86 (38%)
Frame = +1
Query: 211 LTHSEKRFACKLCEKAFHTKINLREHVAMHLDEKLFQCDECGKGFNIKNHLKYHLTTHSG 390
L+ +K + C +C K+F + L H H + ++ L SG
Sbjct: 87 LSDHQKDYKCSVCGKSFPSYQALGGHKTSHRKPVSVDVNNSNGTVTNNGNISNGLVGQSG 146
Query: 391 NKPHKCPVCGKAFRSTHDLEIHSHQH 468
K H C +C K+F S L H H
Sbjct: 147 -KTHNCSICFKSFPSGQALGGHKRCH 171
Score = 32.3 bits (70), Expect = 0.17
Identities = 24/85 (28%), Positives = 34/85 (40%)
Frame = +1
Query: 52 EADLTCAVCNKVFSSLARLRQHKKTHDRNRTRNYTCDTCGKAFYELNVLRAHKLTHSEKR 231
+ D C+VC K F S L HK +H R ++ G N+ + S K
Sbjct: 91 QKDYKCSVCGKSFPSYQALGGHKTSH-RKPVSVDVNNSNGTVTNNGNISNG-LVGQSGKT 148
Query: 232 FACKLCEKAFHTKINLREHVAMHLD 306
C +C K+F + L H H D
Sbjct: 149 HNCSICFKSFPSGQALGGHKRCHYD 173
>At3g19580.1 68416.m02483 zinc finger (C2H2 type) protein 2 (AZF2)
identical to Cys2/His2-type zinc finger protein 2
[Arabidopsis thaliana] gi|6009885|dbj|BAA85107
Length = 273
Score = 34.7 bits (76), Expect = 0.032
Identities = 24/85 (28%), Positives = 30/85 (35%), Gaps = 2/85 (2%)
Frame = +1
Query: 67 CAVCNKVFSSLARLRQHKKTH--DRNRTRNYTCDTCGKAFYELNVLRAHKLTHSEKRFAC 240
C VC K F S L HK +H + T D + H + S K C
Sbjct: 108 CNVCEKAFPSYQALGGHKASHRIKPPTVISTTADDSTAPTISIVAGEKHPIAASGKIHEC 167
Query: 241 KLCEKAFHTKINLREHVAMHLDEKL 315
+C K F T L H H + L
Sbjct: 168 SICHKVFPTGQALGGHKRCHYEGNL 192
Score = 29.5 bits (63), Expect = 1.2
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = +1
Query: 385 SGNKPHKCPVCGKAFRSTHDLEIHSHQH 468
S N P+KC VC KAF S L H H
Sbjct: 101 SKNLPYKCNVCEKAFPSYQALGGHKASH 128
Score = 27.9 bits (59), Expect = 3.7
Identities = 22/84 (26%), Positives = 33/84 (39%), Gaps = 5/84 (5%)
Frame = +1
Query: 232 FACKLCEKAFHTKINLREHVAMHLDE-----KLFQCDECGKGFNIKNHLKYHLTTHSGNK 396
+ C +CEKAF + L H A H + D +I K+ + + K
Sbjct: 106 YKCNVCEKAFPSYQALGGHKASHRIKPPTVISTTADDSTAPTISIVAGEKHPIA--ASGK 163
Query: 397 PHKCPVCGKAFRSTHDLEIHSHQH 468
H+C +C K F + L H H
Sbjct: 164 IHECSICHKVFPTGQALGGHKRCH 187
Score = 27.5 bits (58), Expect = 4.9
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +1
Query: 151 YTCDTCGKAFYELNVLRAHKLTHSEK 228
Y C+ C KAF L HK +H K
Sbjct: 106 YKCNVCEKAFPSYQALGGHKASHRIK 131
>At5g43170.1 68418.m05269 zinc finger (C2H2 type) protein 3 (AZF3)
identical to Cys2/His2-type zinc finger protein 3
[Arabidopsis thaliana] gi|6009889|dbj|BAA85109
Length = 193
Score = 34.3 bits (75), Expect = 0.043
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 13/64 (20%)
Frame = +1
Query: 67 CAVCNKVFSSLARLRQHKKTH---------DRN----RTRNYTCDTCGKAFYELNVLRAH 207
C VC K FSS L HK +H D++ +++ C CGK+F L H
Sbjct: 77 CGVCYKTFSSYQALGGHKASHRSLYGGGENDKSTPSTAVKSHVCSVCGKSFATGQALGGH 136
Query: 208 KLTH 219
K H
Sbjct: 137 KRCH 140
Score = 31.1 bits (67), Expect = 0.40
Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Frame = +1
Query: 211 LTHSEK-RFACKLCEKAFHTKINLREHVAMHLDEKLFQCDECGKGFNIKNHLKYHLTTHS 387
+T +EK + C +C K F + L H A H L+ G G N K+ T +
Sbjct: 67 VTVAEKPSYKCGVCYKTFSSYQALGGHKASH--RSLY-----GGGENDKS------TPST 113
Query: 388 GNKPHKCPVCGKAFRSTHDLEIHSHQH 468
K H C VCGK+F + L H H
Sbjct: 114 AVKSHVCSVCGKSFATGQALGGHKRCH 140
>At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 650
Score = 33.9 bits (74), Expect = 0.057
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Frame = +1
Query: 220 SEKRFACKLCEKAFHTKINLREHVAMH--LDEKLFQCDECGKGFNIKNHLKYHLTTHSGN 393
S+ CK+C K+F L H +H + EKL + E + + K+ L+ S +
Sbjct: 39 SKSSHKCKICGKSFECYQALGGHQRIHRPIKEKLSK-QEFSEVYPRKSKLQKR--PESSS 95
Query: 394 KPHKCPVCGKAFRSTHDLEIHSHQH 468
++C VCGK F L H+ H
Sbjct: 96 SCYECKVCGKIFGCYRGLGGHTKLH 120
Score = 30.3 bits (65), Expect = 0.70
Identities = 19/85 (22%), Positives = 34/85 (40%), Gaps = 2/85 (2%)
Frame = +1
Query: 148 NYTCDTCGKAFYELNVLRAHKLTHS--EKRFACKLCEKAFHTKINLREHVAMHLDEKLFQ 321
++ C CGK+F L H+ H +++ + + + + K L++ ++
Sbjct: 42 SHKCKICGKSFECYQALGGHQRIHRPIKEKLSKQEFSEVYPRKSKLQKR--PESSSSCYE 99
Query: 322 CDECGKGFNIKNHLKYHLTTHSGNK 396
C CGK F L H H K
Sbjct: 100 CKVCGKIFGCYRGLGGHTKLHRSTK 124
Score = 29.1 bits (62), Expect = 1.6
Identities = 32/150 (21%), Positives = 50/150 (33%), Gaps = 15/150 (10%)
Frame = +1
Query: 67 CAVCNKVFSSLARLRQHKKTHDRNRTRNYTCDTCGKAFYE--LNVLRAHKLTHSEKRFAC 240
C +C K F L HK+ H R + C Y + L+A K+ F
Sbjct: 200 CKICGKSFVCSQGLGNHKRVH-REISGKLACKRKYTEDYNPFSDSLKAKKIVKKPSSFEV 258
Query: 241 KLCEKAFHTKINLREHVAMHLDEKLF-QCDECGKGFNIKNHLKYHLTTHS---------- 387
EK H + L++ L F + C K +K + + T
Sbjct: 259 SQEEKILHC-VELKQDFGELLAHSGFDKSISCSKSIKVKKVARKNEKTEDSTSLFGVFVG 317
Query: 388 --GNKPHKCPVCGKAFRSTHDLEIHSHQHT 471
+ H C CG+ F + + H H+
Sbjct: 318 EMSQRLHGCKTCGRKFGTLKGVYGHQRMHS 347
Score = 27.9 bits (59), Expect = 3.7
Identities = 19/82 (23%), Positives = 31/82 (37%)
Frame = +1
Query: 67 CAVCNKVFSSLARLRQHKKTHDRNRTRNYTCDTCGKAFYELNVLRAHKLTHSEKRFACKL 246
C +C K F L H++ H R + + + + L+ + S + CK+
Sbjct: 45 CKICGKSFECYQALGGHQRIH-RPIKEKLSKQEFSEVYPRKSKLQKRPES-SSSCYECKV 102
Query: 247 CEKAFHTKINLREHVAMHLDEK 312
C K F L H +H K
Sbjct: 103 CGKIFGCYRGLGGHTKLHRSTK 124
Score = 27.9 bits (59), Expect = 3.7
Identities = 33/123 (26%), Positives = 48/123 (39%), Gaps = 17/123 (13%)
Frame = +1
Query: 151 YTCDTCGKAFYELNVLRAH-KLTHSEKR-FACKLCEKAFHTKINLREHVA------MHLD 306
Y C CGK F L H KL S KR A E + ++ V+ + +
Sbjct: 98 YECKVCGKIFGCYRGLGGHTKLHRSTKRELASTQDENSLLDSSEAKKIVSQPSSFKVSQE 157
Query: 307 EKLFQCDECGKGFN--------IKNHLKYHLTTHSGNKPH-KCPVCGKAFRSTHDLEIHS 459
EK C E + F+ + + L+ L T + K C +CGK+F + L H
Sbjct: 158 EKFLHCVELKQDFSEPLSHSGALPSTLRSKLQTKTQWKSSCHCKICGKSFVCSQGLGNHK 217
Query: 460 HQH 468
H
Sbjct: 218 RVH 220
>At5g22890.1 68418.m02677 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 373
Score = 33.1 bits (72), Expect = 0.099
Identities = 33/137 (24%), Positives = 52/137 (37%), Gaps = 7/137 (5%)
Frame = +1
Query: 67 CAVCNKVFSSLARLRQHKKTH-DRNRTRNYTCDTCGKAFYELNVLRAHKLTHSEKRFACK 243
C +C K F A LR H + H D +TR + L+ H +S + C+
Sbjct: 219 CQICGKGFKRDANLRMHMRAHGDEYKTREALISPTSQDKKGGYSLKKH--YYSCPQHGCR 276
Query: 244 LCEK-----AFHTKINLREHVAMHLDEKLFQCDECG-KGFNIKNHLKYHLTTHSGNKPHK 405
++ + I + H K++ C C K F++ + L+ H H G+
Sbjct: 277 WNQRHEKFQPLKSVICAKNHYKRSHCPKMYMCRRCSVKHFSVLSDLRTH-EKHCGDIKWV 335
Query: 406 CPVCGKAFRSTHDLEIH 456
C CG F L H
Sbjct: 336 CS-CGTKFSRKDKLMSH 351
Score = 28.7 bits (61), Expect = 2.1
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 400 HKCPVCGKAFRSTHDLEIHSHQH 468
H C +CGK F+ +L +H H
Sbjct: 217 HYCQICGKGFKRDANLRMHMRAH 239
>At5g15480.1 68418.m01812 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 402
Score = 33.1 bits (72), Expect = 0.099
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 313 LFQCDECGKGFNIKNHLKYH 372
LF+C+ECGKGF + + K H
Sbjct: 63 LFRCEECGKGFRYEKYFKNH 82
Score = 29.9 bits (64), Expect = 0.92
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 67 CAVCNKVFSSLARLRQHKKTHDRNRTRN 150
C +CNK+FSS L H+ H ++ +N
Sbjct: 360 CRLCNKIFSSYQALGGHQTFHRMSKCKN 387
>At5g03510.1 68418.m00307 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 292
Score = 33.1 bits (72), Expect = 0.099
Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 18/97 (18%)
Frame = +1
Query: 232 FACKLCEKAFHTKINLREHVAMHLDEKL----FQC----------DECGKGFNIKNHLKY 369
+ CK C+K+FH+ L H A H KL F+C E + + + L
Sbjct: 118 YQCKTCDKSFHSFQALGGHRASHKKPKLGASVFKCVEKKTASASTVETVEAGAVGSFLSL 177
Query: 370 HLTTHSGN----KPHKCPVCGKAFRSTHDLEIHSHQH 468
+T+ G+ K H+C +C F S L H +H
Sbjct: 178 QVTSSDGSKKPEKTHECSICKAEFSSGQALGGHMRRH 214
>At2g41835.1 68415.m05170 zinc finger (C2H2 type, AN1-like) family
protein contains Pfam domain, PF00096: Zinc finger, C2H2
type; contains Pfam domain, PF01428: AN1-like Zinc
finger
Length = 279
Score = 33.1 bits (72), Expect = 0.099
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 4/38 (10%)
Frame = +1
Query: 67 CAVCNKVFSSLARLRQH-KKTHDRNRTRNY---TCDTC 168
C C FSS+ L +H +KTH+RN+ +N+ T D C
Sbjct: 215 CPQCGAKFSSVTSLVEHVEKTHERNKKQNHGNVTVDVC 252
Score = 28.7 bits (61), Expect = 2.1
Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 9/54 (16%)
Frame = +1
Query: 322 CDECGKGFNIKNHLKYHLT-THSGNKPHK--------CPVCGKAFRSTHDLEIH 456
C +CG F+ L H+ TH NK CP C + FR DL H
Sbjct: 215 CPQCGAKFSSVTSLVEHVEKTHERNKKQNHGNVTVDVCPRCSRGFRDPVDLVNH 268
>At1g26610.1 68414.m03241 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 455
Score = 33.1 bits (72), Expect = 0.099
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 223 EKRFACKLCEKAFHTKINLREHVAMHLDEKLFQCDE 330
E++F CK C K F +L H+ H++E DE
Sbjct: 6 ERKFVCKFCSKRFPCGKSLGGHIRTHMNENSADSDE 41
Score = 30.3 bits (65), Expect = 0.70
Identities = 31/117 (26%), Positives = 46/117 (39%), Gaps = 5/117 (4%)
Frame = +1
Query: 52 EADLTCAVCNKVFSSLARLRQHKKTHDRNRTRNYTCDTCGKA--FYELNVLRAHKLTHSE 225
E C C+K F L H +TH + + D K E ++ L +
Sbjct: 6 ERKFVCKFCSKRFPCGKSLGGHIRTHMNENSADSDEDEADKLKMIDENGGQSSYGLRENP 65
Query: 226 KRFACKLCEKAF--HTKIN-LREHVAMHLDEKLFQCDECGKGFNIKNHLKYHLTTHS 387
K+ K F H +I L++ ++L +C ECGKGF L H+ HS
Sbjct: 66 KK------NKRFVDHRQIMALKQQQQQQQLQELRRCRECGKGFVSSKALCGHMACHS 116
Score = 29.1 bits (62), Expect = 1.6
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 391 NKPHKCPVCGKAFRSTHDLEIHSHQH 468
+K H+CP+C + F+S L H H
Sbjct: 396 SKGHECPICFRVFKSGQALGGHKRSH 421
>At3g53600.1 68416.m05920 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 175
Score = 32.7 bits (71), Expect = 0.13
Identities = 24/85 (28%), Positives = 33/85 (38%)
Frame = +1
Query: 214 THSEKRFACKLCEKAFHTKINLREHVAMHLDEKLFQCDECGKGFNIKNHLKYHLTTHSGN 393
T+ F CK C + F + L H A H KL E K N +N +
Sbjct: 43 TNHNNHFECKTCNRKFDSFQALGGHRASHKKPKLIVDQEQVKHRNKENDM---------- 92
Query: 394 KPHKCPVCGKAFRSTHDLEIHSHQH 468
HKC +C + F + L H +H
Sbjct: 93 --HKCTICDQMFGTGQALGGHMRKH 115
>At1g49900.1 68414.m05596 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 917
Score = 32.7 bits (71), Expect = 0.13
Identities = 23/80 (28%), Positives = 33/80 (41%)
Frame = +1
Query: 67 CAVCNKVFSSLARLRQHKKTHDRNRTRNYTCDTCGKAFYELNVLRAHKLTHSEKRFACKL 246
C++C KVF+S L HK +H + + G E R+ L+ S K C +
Sbjct: 195 CSICEKVFTSYQALGGHKASHSIKAAQ---LENAGADAGEKT--RSKMLSPSGKIHKCDI 249
Query: 247 CEKAFHTKINLREHVAMHLD 306
C F T L H H +
Sbjct: 250 CHVLFPTGQALGGHKRRHYE 269
Score = 32.7 bits (71), Expect = 0.13
Identities = 23/80 (28%), Positives = 34/80 (42%)
Frame = +1
Query: 67 CAVCNKVFSSLARLRQHKKTHDRNRTRNYTCDTCGKAFYELNVLRAHKLTHSEKRFACKL 246
C VC + S L HK +H RT+ + G+ +R KL S K C +
Sbjct: 752 CNVCGRELPSYQALGGHKASH---RTKPPVENATGEK------MRPKKLAPSGKIHKCSI 802
Query: 247 CEKAFHTKINLREHVAMHLD 306
C + F T +L H +H +
Sbjct: 803 CHREFSTGQSLGGHKRLHYE 822
Score = 27.5 bits (58), Expect = 4.9
Identities = 19/82 (23%), Positives = 33/82 (40%)
Frame = +1
Query: 139 RTRNYTCDTCGKAFYELNVLRAHKLTHSEKRFACKLCEKAFHTKINLREHVAMHLDEKLF 318
++ +Y C+ CG+ L HK +H K E A K+ ++ + K+
Sbjct: 746 KSDSYQCNVCGRELPSYQALGGHKASHRTK----PPVENATGEKMRPKK---LAPSGKIH 798
Query: 319 QCDECGKGFNIKNHLKYHLTTH 384
+C C + F+ L H H
Sbjct: 799 KCSICHREFSTGQSLGGHKRLH 820
Score = 26.6 bits (56), Expect = 8.6
Identities = 22/78 (28%), Positives = 28/78 (35%)
Frame = +1
Query: 151 YTCDTCGKAFYELNVLRAHKLTHSEKRFACKLCEKAFHTKINLREHVAMHLDEKLFQCDE 330
+ C C K F L HK +HS K A +L E A + K+ +CD
Sbjct: 193 FKCSICEKVFTSYQALGGHKASHSIK--AAQL-ENAGADAGEKTRSKMLSPSGKIHKCDI 249
Query: 331 CGKGFNIKNHLKYHLTTH 384
C F L H H
Sbjct: 250 CHVLFPTGQALGGHKRRH 267
>At1g26590.1 68414.m03239 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 361
Score = 32.7 bits (71), Expect = 0.13
Identities = 22/82 (26%), Positives = 31/82 (37%)
Frame = +1
Query: 223 EKRFACKLCEKAFHTKINLREHVAMHLDEKLFQCDECGKGFNIKNHLKYHLTTHSGNKPH 402
E F CK C K F + L H+ +H +E + K + + K H +
Sbjct: 6 ENSFLCKYCYKTFPSGKALGGHIRIHTNENSVGYNG-NKKKRLVDQRKMMAQKHKQQQQV 64
Query: 403 KCPVCGKAFRSTHDLEIHSHQH 468
C CG+ F S L H H
Sbjct: 65 GCRECGRVFVSLKALRGHMACH 86
Score = 29.1 bits (62), Expect = 1.6
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 391 NKPHKCPVCGKAFRSTHDLEIHSHQHT 471
+K H+CP+C + F+S L H H+
Sbjct: 312 SKGHECPICFRMFKSGQALGGHKRSHS 338
Score = 27.9 bits (59), Expect = 3.7
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +1
Query: 157 CDTCGKAFYELNVLRAHKLTHSE 225
C CG+ F L LR H H E
Sbjct: 66 CRECGRVFVSLKALRGHMACHGE 88
>At5g22920.1 68418.m02680 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profiles:PF05495 CHY zinc
finger, PF00097 zinc finger, C3HC4 type (RING finger)
Length = 291
Score = 31.9 bits (69), Expect = 0.23
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 11/95 (11%)
Frame = +1
Query: 142 TRNYTCDTCGKAFYELNVLRAHKLTHSEKRFACKLCEKAFHTKINL----REHVAMHLDE 309
TR+ T CG + L K R+ C +C K+ NL E VA +
Sbjct: 174 TRDITVLRCGHTMH----LECTKDMGLHNRYTCPVCSKSICDMSNLWKKLDEEVAAYPMP 229
Query: 310 KLFQ-------CDECGKGFNIKNHLKYHLTTHSGN 393
K+++ C++CG N++ HL H + G+
Sbjct: 230 KMYENKMVWILCNDCGSNTNVRFHLIAHKCSSCGS 264
>At3g46090.1 68416.m04987 zinc finger (C2H2 type) family protein
(ZAT7) identical to zinc finger protein ZAT7
[Arabidopsis thaliana] gi|1418341|emb|CAA67234; contains
Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 168
Score = 31.9 bits (69), Expect = 0.23
Identities = 25/82 (30%), Positives = 31/82 (37%)
Frame = +1
Query: 223 EKRFACKLCEKAFHTKINLREHVAMHLDEKLFQCDECGKGFNIKNHLKYHLTTHSGNKPH 402
E+ F CK C K F + L H A H +KL D L L+ H
Sbjct: 37 ERVFRCKTCLKEFSSFQALGGHRASH--KKLINSDNPS--------LLGSLSNKKTKTSH 86
Query: 403 KCPVCGKAFRSTHDLEIHSHQH 468
CP+CG F L H +H
Sbjct: 87 PCPICGVKFPMGQALGGHMRRH 108
>At3g46080.1 68416.m04986 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 164
Score = 31.5 bits (68), Expect = 0.30
Identities = 26/83 (31%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Frame = +1
Query: 223 EKR-FACKLCEKAFHTKINLREHVAMHLDEKLFQCDECGKGFNIKNHLKYHLTTHSGNKP 399
EKR F CK C K F + L H A H +KL + ++ N T+H
Sbjct: 33 EKRVFRCKTCLKEFSSFQALGGHRASH--KKLINSSDPSLLGSLSNKKTKTATSHP---- 86
Query: 400 HKCPVCGKAFRSTHDLEIHSHQH 468
CP+CG F L H +H
Sbjct: 87 --CPICGVEFPMGQALGGHMRRH 107
>At5g59820.1 68418.m07500 zinc finger (C2H2 type) family protein
(ZAT12) identical to zinc finger protein ZAT12
[Arabidopsis thaliana] gi|1418325|emb|CAA67232
Length = 162
Score = 30.7 bits (66), Expect = 0.53
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = +1
Query: 58 DLTCAVCNKVFSSLARLRQHKKTHDRNRTRNYTCDTCGKAFYELNVLRAHKLTHSE 225
D+T A C + S + + + ++ R +TC TC K F+ L H+ +H +
Sbjct: 12 DVTAANCLMLLSRVGQ----ENVDGGDQKRVFTCKTCLKQFHSFQALGGHRASHKK 63
Score = 30.3 bits (65), Expect = 0.70
Identities = 28/83 (33%), Positives = 33/83 (39%), Gaps = 1/83 (1%)
Frame = +1
Query: 223 EKR-FACKLCEKAFHTKINLREHVAMHLDEKLFQCDECGKGFNIKNHLKYHLTTHSGNKP 399
+KR F CK C K FH+ L H A H K D G L + T S
Sbjct: 35 QKRVFTCKTCLKQFHSFQALGGHRASH---KKPNNDALSSG------LMKKVKTSS---- 81
Query: 400 HKCPVCGKAFRSTHDLEIHSHQH 468
H CP+CG F L H +H
Sbjct: 82 HPCPICGVEFPMGQALGGHMRRH 104
>At4g04404.1 68417.m00636 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 230
Score = 30.7 bits (66), Expect = 0.53
Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 5/99 (5%)
Frame = +1
Query: 148 NYTCDTCGKAFYELNVLRAHKLTHSEKRFACKLCEKAFHTKIN---LREHVAMHLDEKLF 318
++ C CGK+F L H+ H + KL K + K + ++EK+
Sbjct: 90 SHRCQICGKSFECYQALGGHRRLH--RPIKGKLARKREYYKDDNSLFDSSGPSRVEEKIL 147
Query: 319 QCDECGKGFN--IKNHLKYHLTTHSGNKPHKCPVCGKAF 429
C E + F + + K+ S + ++C +CGK+F
Sbjct: 148 DCVELKQDFGELLPLNSKFQKRPVS-SCSYRCKICGKSF 185
>At3g13020.1 68416.m01622 hAT dimerisation domain-containing protein
contains Pfam profile: PF04937 domain of unknown
function (DUF659), weak hit to PF05699: hAT family
dimerisation domain
Length = 605
Score = 30.7 bits (66), Expect = 0.53
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 265 TKINLREH-VAMHLDEKLFQCDECGKGFNIKNHLKYHLTTHSGNKPHKCPVCGKAFRST 438
T +++REH + + + +C+ CGK N + LK+HL + H C R T
Sbjct: 4 TVVDVREHGICVDKKKSRVKCNYCGKEMNSFHRLKHHLGAVGTDVTH-CDQVSLTLRET 61
>At5g27880.1 68418.m03344 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 278
Score = 30.3 bits (65), Expect = 0.70
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +1
Query: 91 SSLARLRQHKKTHDRNRTRNYTCDTCGKAFYELNVLRAHKLTHSEKR 231
S++ R R+ K + + YTC C K F L H+ H ++R
Sbjct: 60 SAVRRGREIMKFYPSKSNKIYTCHFCKKGFSTSQALGGHQNAHKQER 106
>At5g63280.1 68418.m07942 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 271
Score = 29.9 bits (64), Expect = 0.92
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 280 REHVAMHLDEKLFQCDECGKGFNIKNHLKYHLTTHSGN 393
+EH +H+D ++C C K FN + L H +T N
Sbjct: 93 QEHHKVHVDVFEWKCGYCKKSFNDEKFLDKHFSTRHYN 130
>At3g01030.1 68416.m00004 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 353
Score = 29.9 bits (64), Expect = 0.92
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +1
Query: 313 LFQCDECGKGFNIKNHLKYHL-TTHSGNKPHKCPVC 417
L +C ECGKGF + L HL THS + C
Sbjct: 77 LIRCKECGKGFLYEKCLFNHLQVTHSEESTRRSLFC 112
Score = 28.3 bits (60), Expect = 2.8
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Frame = +1
Query: 1 QKHMRQFISTRPARSLTEADLT--CAVCNKVFSSLARLRQHKKTHD-RNRTRNYT 156
QK +RQ + + S E ++ C +C+KVFS+ L H+ H RN++++ T
Sbjct: 262 QKLVRQETAFEDSVSGFEMNIEHRCGLCHKVFSTYQTLGGHQTFHRMRNKSKSQT 316
>At1g13290.1 68414.m01543 zinc finger (C2H2 type) family protein
contains Pfam domian PF00096: Zinc finger, C2H2 type
Length = 302
Score = 29.9 bits (64), Expect = 0.92
Identities = 37/133 (27%), Positives = 49/133 (36%), Gaps = 29/133 (21%)
Frame = +1
Query: 64 TCAVCNKVFSSLARLRQHKKTHDRN------------------RTRNYTC-DTC------ 168
+C+VCNK F+ ++ H H R Y C + C
Sbjct: 102 SCSVCNKTFNRFNNMQMHMWGHGSQYRKGPESLRGTKSSSSILRLPCYCCAEGCKNNIDH 161
Query: 169 --GKAFYELNVLRAH-KLTHSEKRFAC-KLCEKAFHTKINLREHVAMHLDEKLFQCDECG 336
K + L+ H K H K F C K CEK F + + R H KL+ C CG
Sbjct: 162 PRSKPLKDFRTLQTHYKRKHGAKPFRCRKKCEKTFAVRGDWRTHEKN--CGKLWFC-VCG 218
Query: 337 KGFNIKNHLKYHL 375
F K LK H+
Sbjct: 219 SDFKHKRSLKDHV 231
Score = 27.5 bits (58), Expect = 4.9
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 316 FQCDECGKGFNIKNHLKYHLTTHSGNKPHKCPVCGKAFRSTHDL 447
F C C K FN N+++ H+ H G++ K P + +S+ +
Sbjct: 101 FSCSVCNKTFNRFNNMQMHMWGH-GSQYRKGPESLRGTKSSSSI 143
>At1g03280.1 68414.m00306 transcription initiation factor IIE
(TFIIE) alpha subunit family protein / general
transcription factor TFIIE family protein contains Pfam
profile: PF02002 TFIIE alpha subunit
Length = 479
Score = 29.9 bits (64), Expect = 0.92
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +1
Query: 73 VCNKVFSSLARLRQHKKTH--DRNRTRNYTCDTCGKAFYELNVLRAHKLTHSEKRFACKL 246
+C+ V L R+++ K D+N + Y C C + + L+ LR ++ + F C+
Sbjct: 138 ICDVVRFRLHRMKKRLKDELEDKNTVQEYGCPNCQRKYNALDALRL--ISMVDDSFHCEN 195
Query: 247 C 249
C
Sbjct: 196 C 196
>At1g80730.1 68414.m09472 zinc finger (C2H2 type) family protein
(ZFP1) identical to zinc finger protein, ZFP1
gi|790673|gb|AAA87297; contains zinc finger, C2H2 type,
domain, Prosite:PS00028
Length = 228
Score = 29.5 bits (63), Expect = 1.2
Identities = 17/65 (26%), Positives = 28/65 (43%)
Frame = +1
Query: 49 TEADLTCAVCNKVFSSLARLRQHKKTHDRNRTRNYTCDTCGKAFYELNVLRAHKLTHSEK 228
T ++L K SS QH++ + R ++C+ C + FY L H+ H +
Sbjct: 35 TSSELNLIDSFKTSSSSTSHHQHQQEQLAD-PRVFSCNYCQRKFYSSQALGGHQNAHKRE 93
Query: 229 RFACK 243
R K
Sbjct: 94 RTLAK 98
>At4g16015.1 68417.m02430 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 535
Score = 29.1 bits (62), Expect = 1.6
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 58 DLTCAVCNKVFSSLARLRQHKKTHDRNRTRNYTCDTCG 171
D+ CA N + S++ L+ H+ RN+ CD CG
Sbjct: 103 DINCAK-NPLPSTIVHLKAHEHLLTLMPQRNFVCDACG 139
Score = 27.9 bits (59), Expect = 3.7
Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
Frame = +1
Query: 61 LTCAVCNKVF----SSLARLRQHKKTHDRNRTRNYTCDTCGKAFYELNVLRAHKLTHSEK 228
L+C C+ + S+L ++ +HK D + Y T + + E+ + +++K
Sbjct: 394 LSCEECDFILDIKCSNLPKMVKHKNDKDHLLSLCYGEKTSEQYWCEI----CEEALNAKK 449
Query: 229 RF-ACKLCEKAFHTKINLREHVAMHLDEK 312
F +C C+ FH K L + V M+ + K
Sbjct: 450 WFYSCDDCDITFHIKCTLGDFVGMYQEAK 478
>At3g27970.1 68416.m03491 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 354
Score = 29.1 bits (62), Expect = 1.6
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +1
Query: 115 HKKTHDRNRTRNYTCDTCGKAFYELNVLRAH-KLT-HSEKRFACKLCEKAFHTKINLREH 288
++ + + + T C C + F +L L H K++ HS C +C+K + +LREH
Sbjct: 3 YRSSMESSETLRNKCAACYRQFNKLEHLVEHMKISYHSGHEPTCGVCKKHCRSFESLREH 62
Query: 289 V 291
+
Sbjct: 63 L 63
Score = 28.3 bits (60), Expect = 2.8
Identities = 18/59 (30%), Positives = 24/59 (40%)
Frame = +1
Query: 67 CAVCNKVFSSLARLRQHKKTHDRNRTRNYTCDTCGKAFYELNVLRAHKLTHSEKRFACK 243
CA C + F+ L L +H K + TC C K LR H + K+ CK
Sbjct: 17 CAACYRQFNKLEHLVEHMKI-SYHSGHEPTCGVCKKHCRSFESLREHLIGPLPKQ-ECK 73
>At2g28710.1 68415.m03490 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 156
Score = 29.1 bits (62), Expect = 1.6
Identities = 23/90 (25%), Positives = 32/90 (35%)
Frame = +1
Query: 199 RAHKLTHSEKRFACKLCEKAFHTKINLREHVAMHLDEKLFQCDECGKGFNIKNHLKYHLT 378
+AH+ + FACK C K F + L H A H + +K
Sbjct: 23 KAHQNDTKSRVFACKTCNKEFPSFQALGGHRASHRRSAALEGHAPPSPKRVK-------- 74
Query: 379 THSGNKPHKCPVCGKAFRSTHDLEIHSHQH 468
H+CP+CG F L H +H
Sbjct: 75 ----PVKHECPICGAEFAVGQALGGHMRKH 100
Score = 28.3 bits (60), Expect = 2.8
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +1
Query: 121 KTHDRN-RTRNYTCDTCGKAFYELNVLRAHKLTH 219
K H + ++R + C TC K F L H+ +H
Sbjct: 23 KAHQNDTKSRVFACKTCNKEFPSFQALGGHRASH 56
>At2g19380.1 68415.m02260 RNA recognition motif (RRM)-containing
protein similar to UBP1 interacting protein 1a
[Arabidopsis thaliana] GI:19574236; contains InterPro
entry IPR000504: RNA-binding region RNP-1 (RNA
recognition motif) (RRM); contains Pfam profile PF00096:
Zinc finger, C2H2 type
Length = 613
Score = 29.1 bits (62), Expect = 1.6
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +1
Query: 316 FQCDECGKGFNIKNHLKYHLTTHSGNKPHKCPVCGKAFRSTHDLEIHSH 462
FQCD+CG+ K L H++ + K C CG F + +H H
Sbjct: 4 FQCDDCGENLK-KPRLPRHMSMCTATK-FSCIDCGNMF---GQVSVHYH 47
>At2g13430.1 68415.m01482 hypothetical protein
Length = 180
Score = 28.7 bits (61), Expect = 2.1
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +1
Query: 13 RQFISTRPARSLTEADL-TCAVCNKVFSSLARLRQHKKTHDRNRTRN 150
++ ++ +P + LT+ + C+ N R +K +H+RNRTRN
Sbjct: 66 KRVLAGKPIKLLTQIQVFKCSPINANSRQRRSGRSNKASHERNRTRN 112
>At1g22060.1 68414.m02759 expressed protein
Length = 1999
Score = 28.7 bits (61), Expect = 2.1
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 202 AHKLTHSEKRFACKLCEKAF 261
+H LT +F CK+CEK F
Sbjct: 943 SHDLTEQLDKFLCKICEKCF 962
>At4g20340.1 68417.m02969 transcription initiation factor IIE
(TFIIE) alpha subunit family protein / general
transcription factor TFIIE family protein contains Pfam
profile: PF02002 TFIIE alpha subunit
Length = 527
Score = 28.3 bits (60), Expect = 2.8
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +1
Query: 97 LARLRQHKKTH--DRNRTRNYTCDTCGKAFYELNVLRAHKLTHSEKRFACKLC 249
L RL++ K DRN + Y C C + + L+ LR ++ + F C+ C
Sbjct: 146 LHRLKKKFKDELEDRNTVQEYGCPNCKRKYNALDALRL--ISMEDDSFHCENC 196
>At2g23740.1 68415.m02834 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 907
Score = 28.3 bits (60), Expect = 2.8
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 6/54 (11%)
Frame = +1
Query: 232 FACKLCEKAFHTKINLREHVA----MHLDEK--LFQCDECGKGFNIKNHLKYHL 375
FAC +C +F + L HV + EK L QC CG F K L H+
Sbjct: 496 FACAICLDSFVRRKLLEIHVEERHHVQFAEKCMLLQCIPCGSHFGDKEQLLVHV 549
>At2g23100.1 68415.m02756 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 711
Score = 28.3 bits (60), Expect = 2.8
Identities = 22/72 (30%), Positives = 28/72 (38%), Gaps = 3/72 (4%)
Frame = +1
Query: 238 CKLCEKAFHTKINLREHVAMHLDEKLFQCDECGKGFNIKNHLKYH---LTTHSGNKPHKC 408
CK C+K F ++ H ++ F C I HLK H LT P C
Sbjct: 225 CKCCQKRFE---DIYYHCSVCNFSLNFTCTIKPPPLTI-THLKSHSHILTLFPRRIPLPC 280
Query: 409 PVCGKAFRSTHD 444
VCG + HD
Sbjct: 281 DVCGLSLNDAHD 292
>At1g49330.1 68414.m05529 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 331
Score = 28.3 bits (60), Expect = 2.8
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +1
Query: 187 LNVLRAHKLTHSEKRFACKLCEKAFHTKINLREHVA 294
L L ++++T C+ CEK + NLRE A
Sbjct: 184 LEYLESNQITTITGEVQCRHCEKVYQVSYNLRERFA 219
>At1g24625.1 68414.m03099 zinc finger (C2H2 type) family protein
(ZFP7) identical to zinc finger protein, ZFP7
gi|790685|gb|AAA87303; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 209
Score = 28.3 bits (60), Expect = 2.8
Identities = 12/42 (28%), Positives = 18/42 (42%)
Frame = +1
Query: 118 KKTHDRNRTRNYTCDTCGKAFYELNVLRAHKLTHSEKRFACK 243
K T R ++C+ C + FY L H+ H +R K
Sbjct: 48 KSTKCEANPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAK 89
>At5g56200.1 68418.m07012 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 493
Score = 27.9 bits (59), Expect = 3.7
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 67 CAVCNKVFSSLARLRQHKKTHDR 135
C CNK FSS L H+ +H++
Sbjct: 344 CVTCNKSFSSYQALGGHRASHNK 366
>At4g35700.1 68417.m05067 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 275
Score = 27.9 bits (59), Expect = 3.7
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +1
Query: 379 THSGNKPHKCPVCGKAFRSTHDLEIHSHQH 468
TH P C VCGK F S + H QH
Sbjct: 135 THLPQGPPMCNVCGKGFASWKAVFGHLRQH 164
>At4g08330.1 68417.m01375 expressed protein
Length = 164
Score = 27.9 bits (59), Expect = 3.7
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = +1
Query: 148 NYTCDTCGKAFYELNVLRAHKLTHSEKRFACKLCEKAFHTKINLREHVAMHLDEKLFQC 324
NY+C +CG YELN+ +++T + K + + N+ E +DE FQC
Sbjct: 37 NYSCGSCG---YELNLSSTNRITSTIGSKYGKSMKSGIISFFNIDEGRFSQVDE--FQC 90
>At3g13010.1 68416.m01621 hAT dimerisation domain-containing protein
contains Pfam profile PF04937: Protein of unknown
function (DUF 659), weak hit to PF05699: hAT family
dimerisation domain
Length = 572
Score = 27.9 bits (59), Expect = 3.7
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 271 INLREHVAMHLDEKLFQCDECGKGFNIKNHLKYHL 375
+N+ ++ D QC C K N N LKYHL
Sbjct: 6 VNVHDYGTWVEDGARVQCTFCDKRMNDFNRLKYHL 40
>At2g15740.1 68415.m01802 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 329
Score = 27.9 bits (59), Expect = 3.7
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +1
Query: 64 TCAVCNKVFSSLARLRQHKKTHDRNRT 144
TC CN VF++ + H +H +N T
Sbjct: 245 TCPKCNGVFNTSQKFAAHMSSHYKNET 271
>At5g57520.1 68418.m07187 zinc finger (C2H2 type) family protein
(ZFP2) identical to zinc finger protein 2 (ZFP2)
GI:790674 from [Arabidopsis thaliana]; contains Pfam
domain, PF00096: Zinc finger, C2H2 type
Length = 150
Score = 27.5 bits (58), Expect = 4.9
Identities = 11/41 (26%), Positives = 19/41 (46%)
Frame = +1
Query: 145 RNYTCDTCGKAFYELNVLRAHKLTHSEKRFACKLCEKAFHT 267
R ++C+ C + FY L H+ H +R K + F +
Sbjct: 50 RVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSRELFRS 90
>At5g06070.1 68418.m00673 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 226
Score = 27.5 bits (58), Expect = 4.9
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = +1
Query: 145 RNYTCDTCGKAFYELNVLRAHKLTHSEKRFACK 243
R+Y+C CG+ F L H H R K
Sbjct: 53 RSYSCSFCGREFKSAQALGGHMNVHRRDRARLK 85
>At3g20280.2 68416.m02570 PHD finger family protein contains Pfam
profile: PF00628 PHD-finger
Length = 482
Score = 27.5 bits (58), Expect = 4.9
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 238 CKLCEKAFHTKINLREHVAMHLDEKLFQCDECGKGFNIK 354
C CEKA+H K L+ + + + + C C + FN K
Sbjct: 64 CDACEKAYHLKC-LQGNNMKGVPKSEWHCSRCVQAFNGK 101
>At3g20280.1 68416.m02569 PHD finger family protein contains Pfam
profile: PF00628 PHD-finger
Length = 743
Score = 27.5 bits (58), Expect = 4.9
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 238 CKLCEKAFHTKINLREHVAMHLDEKLFQCDECGKGFNIK 354
C CEKA+H K L+ + + + + C C + FN K
Sbjct: 325 CDACEKAYHLKC-LQGNNMKGVPKSEWHCSRCVQAFNGK 362
>At1g50710.1 68414.m05702 expressed protein
Length = 423
Score = 27.5 bits (58), Expect = 4.9
Identities = 17/64 (26%), Positives = 30/64 (46%)
Frame = +1
Query: 172 KAFYELNVLRAHKLTHSEKRFACKLCEKAFHTKINLREHVAMHLDEKLFQCDECGKGFNI 351
K +L + HK +K + CK CE + K+ + E+V + + + D NI
Sbjct: 304 KLVKDLKLEHQHKYNEMQKTWLCKRCE-TMNAKLRVLENVLL---LETYTPDSISALHNI 359
Query: 352 KNHL 363
+N+L
Sbjct: 360 RNYL 363
>At1g02040.1 68414.m00124 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 324
Score = 27.5 bits (58), Expect = 4.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1
Query: 67 CAVCNKVFSSLARLRQHKKTH 129
C +C++VFSS L HK+ H
Sbjct: 227 CTICHRVFSSGQALGGHKRCH 247
>At2g17180.1 68415.m01984 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 270
Score = 27.1 bits (57), Expect = 6.5
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +1
Query: 223 EKRFACKLCEKAFHTKINLREHVAMHLDEK 312
E+RF C C+K F + L H A H D K
Sbjct: 145 EERFECDGCKKVFGSHQALGGHRATHKDVK 174
>At1g66140.1 68414.m07506 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 260
Score = 27.1 bits (57), Expect = 6.5
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +1
Query: 145 RNYTCDTCGKAFYELNVLRAHKLTHSEKRFACK 243
R ++C+ C + FY L H+ H +R K
Sbjct: 83 RVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK 115
>At1g47280.1 68414.m05234 expressed protein
Length = 80
Score = 27.1 bits (57), Expect = 6.5
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -3
Query: 366 F*MIFNVEPFTTLVALEELLVQMHSDMLTQVYLRVESFFAQLAGES 229
F +IF V T+V+ EEL V++ + +T S F AGE+
Sbjct: 7 FAIIFTVSMVMTMVSAEELPVKVTGNEMTLAAEAAASSFKSSAGEA 52
>At1g10480.1 68414.m01180 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 211
Score = 27.1 bits (57), Expect = 6.5
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +1
Query: 394 KPHKCPVCGKAFRSTHDLEIHSHQH 468
K H+C CGK F ++ L H + H
Sbjct: 58 KRHECQYCGKEFANSQALGGHQNAH 82
>At5g36060.1 68418.m04344 hypothetical protein
Length = 165
Score = 26.6 bits (56), Expect = 8.6
Identities = 12/51 (23%), Positives = 26/51 (50%)
Frame = -1
Query: 362 K*FLMLNPLPHSSHWKSFSSKCIATCSRKFIFVWKAFSHSLQANLFSLCVN 210
K F+ PL ++ + + C+ R + F+W + HS+ + F+ C++
Sbjct: 40 KSFVKAGPLFKAAVYSKETLSCVRL-DRSWYFMWWSMPHSIYYHFFTKCLD 89
>At5g25160.1 68418.m02983 zinc finger (C2H2 type) family protein
(ZFP3) identical to zinc finger protein, ZFP3
gi|790677|gb|AAA87299; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 235
Score = 26.6 bits (56), Expect = 8.6
Identities = 9/31 (29%), Positives = 15/31 (48%)
Frame = +1
Query: 151 YTCDTCGKAFYELNVLRAHKLTHSEKRFACK 243
++C+ C + FY L H+ H +R K
Sbjct: 61 FSCNYCQRTFYSSQALGGHQNAHKRERTLAK 91
>At5g10970.1 68418.m01275 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type domain, Prosite:PS00028
Length = 272
Score = 26.6 bits (56), Expect = 8.6
Identities = 9/31 (29%), Positives = 15/31 (48%)
Frame = +1
Query: 151 YTCDTCGKAFYELNVLRAHKLTHSEKRFACK 243
++C+ C + FY L H+ H +R K
Sbjct: 104 FSCNYCQRTFYSSQALGGHQNAHKRERTLAK 134
>At5g09790.1 68418.m01133 PHD finger family protein / SET
domain-containing protein contains Pfam domain, PF00628:
PHD-finger and PF00856: SET domain
Length = 352
Score = 26.6 bits (56), Expect = 8.6
Identities = 8/17 (47%), Positives = 14/17 (82%)
Frame = +1
Query: 304 DEKLFQCDECGKGFNIK 354
D++L CD+C +GF++K
Sbjct: 76 DDELLLCDKCDRGFHMK 92
>At5g01860.1 68418.m00105 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 215
Score = 26.6 bits (56), Expect = 8.6
Identities = 12/46 (26%), Positives = 18/46 (39%)
Frame = +1
Query: 106 LRQHKKTHDRNRTRNYTCDTCGKAFYELNVLRAHKLTHSEKRFACK 243
L T + + R + C C K F L H+ H ++R K
Sbjct: 52 LFNESSTRNEAKARVFACTFCKKEFSTSQALGGHQNAHKQERSLAK 97
>At3g49980.1 68416.m05465 F-box family protein similar to F-box
protein family, AtFBX9 (GI:20197985) [Arabidopsis
thaliana]; contains Pfam PF00646: F-box domain; contains
TIGRFAM TIGR01640 : F-box protein interaction domain
Length = 382
Score = 26.6 bits (56), Expect = 8.6
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +1
Query: 1 QKHMRQFISTRPARSLTEADLTCAVCNKVFSSLARLRQH 117
Q+ + + + PA SL + LTC N++F+ R+H
Sbjct: 7 QELLEEILCRVPATSLKQLRLTCKEWNRLFNDRTFSRKH 45
>At2g26940.1 68415.m03231 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 286
Score = 26.6 bits (56), Expect = 8.6
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +1
Query: 403 KCPVCGKAFRSTHDLEIHSHQH 468
+C +CGK F++ H L H +H
Sbjct: 120 RCCLCGKEFQTMHSLFGHMRRH 141
>At2g19260.1 68415.m02248 ELM2 domain-containing protein / PHD
finger family protein contains Pfam profiles: PF01448
ELM2 domain, PF00628 PHD-finger
Length = 631
Score = 26.6 bits (56), Expect = 8.6
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = +1
Query: 223 EKRFACKLCEKAFHTK-INLREHVAMHLDEKLFQCDECGKGFNIKNHLK 366
EK C CE+A+HT+ ++ +DE L C C K + K K
Sbjct: 422 EKMLICDECEEAYHTRCCGVQMKDVAEIDEWL--CPSCLKNQSSKTKTK 468
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,139,505
Number of Sequences: 28952
Number of extensions: 231730
Number of successful extensions: 1201
Number of sequences better than 10.0: 98
Number of HSP's better than 10.0 without gapping: 793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1089
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 811731120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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