Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_J07
(475 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY750848-1|AAU81930.1| 1032|Homo sapiens RTN3-A1 protein. 32 0.88
AY427821-1|AAR02474.1| 1013|Homo sapiens reticulon 3-A protein. 32 0.88
DQ926539-1|ABK81366.1| 108|Homo sapiens immunoglobulin heavy ch... 30 4.7
AF103343-1|AAD20512.2| 112|Homo sapiens immunoglobulin heavy ch... 29 6.2
EF623993-1|ABR25253.1| 1052|Homo sapiens ubiquitin-activating en... 29 8.2
BC126486-1|AAI26487.1| 1052|Homo sapiens ubiquitin-activating en... 29 8.2
BC126484-1|AAI26485.1| 1052|Homo sapiens ubiquitin-activating en... 29 8.2
AL832458-1|CAD89959.1| 1052|Homo sapiens hypothetical protein pr... 29 8.2
AL832015-1|CAD89908.1| 1052|Homo sapiens hypothetical protein pr... 29 8.2
AK001670-1|BAA91824.1| 459|Homo sapiens protein ( Homo sapiens ... 29 8.2
AC096720-2|AAY40999.1| 787|Homo sapiens unknown protein. 29 8.2
AB014773-1|BAB19785.1| 1052|Homo sapiens MOP-4 protein. 29 8.2
>AY750848-1|AAU81930.1| 1032|Homo sapiens RTN3-A1 protein.
Length = 1032
Score = 32.3 bits (70), Expect = 0.88
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = -1
Query: 250 KDNSLKGTKDFGKLSIGSDEKQDSKKSFANDKVCSI*RNRTSHRVVLKTALSNE 89
KD+ + T DFG S+ +D++ S NDK+ + RN+ + R + LS +
Sbjct: 262 KDSYKESTDDFGSWSVHTDKESSEDISETNDKLFPL-RNKEAGRYPMSALLSRQ 314
>AY427821-1|AAR02474.1| 1013|Homo sapiens reticulon 3-A protein.
Length = 1013
Score = 32.3 bits (70), Expect = 0.88
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = -1
Query: 250 KDNSLKGTKDFGKLSIGSDEKQDSKKSFANDKVCSI*RNRTSHRVVLKTALSNE 89
KD+ + T DFG S+ +D++ S NDK+ + RN+ + R + LS +
Sbjct: 243 KDSYKESTDDFGSWSVHTDKESSEDISETNDKLFPL-RNKEAGRYPMSALLSRQ 295
>DQ926539-1|ABK81366.1| 108|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 108
Score = 29.9 bits (64), Expect = 4.7
Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 11/66 (16%)
Frame = -1
Query: 442 ETLSLTCSIVADEAGFISRSEIRLP-----------YTRHEMKINNNVKRNIHVKVFKSK 296
ETLSLTCS+ D + IR P YT IN ++K + + V SK
Sbjct: 16 ETLSLTCSVSGDSISSYHWTWIRQPAGKELEWIGLIYTSGNTNINPSLKGRVTMSVDTSK 75
Query: 295 N*NSLK 278
N SLK
Sbjct: 76 NQFSLK 81
>AF103343-1|AAD20512.2| 112|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 112
Score = 29.5 bits (63), Expect = 6.2
Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 11/66 (16%)
Frame = -1
Query: 442 ETLSLTCSIVADEAGFISRSEIRLP-----------YTRHEMKINNNVKRNIHVKVFKSK 296
ETLSLTC++ D S IR P Y+R N ++K + + V SK
Sbjct: 8 ETLSLTCTVSGDSISTYYWSWIRQPPGKGLEWIGYIYSRGSTNYNPSLKSRVTISVDTSK 67
Query: 295 N*NSLK 278
N SLK
Sbjct: 68 NQFSLK 73
>EF623993-1|ABR25253.1| 1052|Homo sapiens ubiquitin-activating
enzyme 6 protein.
Length = 1052
Score = 29.1 bits (62), Expect = 8.2
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 144 IEHTLSFAKDFFESCFSSLP 203
IEHT+ +A+D FES FS P
Sbjct: 634 IEHTIQWARDKFESSFSHKP 653
>BC126486-1|AAI26487.1| 1052|Homo sapiens ubiquitin-activating
enzyme E1-like 2 protein.
Length = 1052
Score = 29.1 bits (62), Expect = 8.2
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 144 IEHTLSFAKDFFESCFSSLP 203
IEHT+ +A+D FES FS P
Sbjct: 634 IEHTIQWARDKFESSFSHKP 653
>BC126484-1|AAI26485.1| 1052|Homo sapiens ubiquitin-activating
enzyme E1-like 2 protein.
Length = 1052
Score = 29.1 bits (62), Expect = 8.2
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 144 IEHTLSFAKDFFESCFSSLP 203
IEHT+ +A+D FES FS P
Sbjct: 634 IEHTIQWARDKFESSFSHKP 653
>AL832458-1|CAD89959.1| 1052|Homo sapiens hypothetical protein
protein.
Length = 1052
Score = 29.1 bits (62), Expect = 8.2
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 144 IEHTLSFAKDFFESCFSSLP 203
IEHT+ +A+D FES FS P
Sbjct: 634 IEHTIQWARDKFESSFSHKP 653
>AL832015-1|CAD89908.1| 1052|Homo sapiens hypothetical protein
protein.
Length = 1052
Score = 29.1 bits (62), Expect = 8.2
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 144 IEHTLSFAKDFFESCFSSLP 203
IEHT+ +A+D FES FS P
Sbjct: 634 IEHTIQWARDKFESSFSHKP 653
>AK001670-1|BAA91824.1| 459|Homo sapiens protein ( Homo sapiens
cDNA FLJ10808 fis, clone NT2RP4000879, weakly similar to
UBIQUITIN-ACTIVATING ENZYME E1. ).
Length = 459
Score = 29.1 bits (62), Expect = 8.2
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 144 IEHTLSFAKDFFESCFSSLP 203
IEHT+ +A+D FES FS P
Sbjct: 41 IEHTIQWARDKFESSFSHKP 60
>AC096720-2|AAY40999.1| 787|Homo sapiens unknown protein.
Length = 787
Score = 29.1 bits (62), Expect = 8.2
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 144 IEHTLSFAKDFFESCFSSLP 203
IEHT+ +A+D FES FS P
Sbjct: 369 IEHTIQWARDKFESSFSHKP 388
>AB014773-1|BAB19785.1| 1052|Homo sapiens MOP-4 protein.
Length = 1052
Score = 29.1 bits (62), Expect = 8.2
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 144 IEHTLSFAKDFFESCFSSLP 203
IEHT+ +A+D FES FS P
Sbjct: 634 IEHTIQWARDKFESSFSHKP 653
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,229,164
Number of Sequences: 237096
Number of extensions: 1080819
Number of successful extensions: 3063
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3055
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4156838854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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