Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_J07
         (475 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     25   0.55 
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   2.9  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    21   5.1  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    21   5.1  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    21   5.1  

>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 24.6 bits (51), Expect = 0.55
 Identities = 18/52 (34%), Positives = 27/52 (51%)
 Frame = +3

Query: 48  IHLFYNIKNFNVMSSFDNAVFNTTLCEVLFLQIEHTLSFAKDFFESCFSSLP 203
           IHLF++  NF  M +F  +V++ T    L    EHTL     F    +S++P
Sbjct: 179 IHLFHDASNFIAMETFP-SVYSKTRRRAL----EHTLD---RFHNDKYSNVP 222


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +3

Query: 147 EHTLSFAKDFFESCFSSL 200
           E  L  AKDF E  FSS+
Sbjct: 63  EEILLHAKDFLEQYFSSI 80


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = -1

Query: 463 SLGNYKLETLSLTCSIVADEAGFISRSEIRLPYTR 359
           SL  Y ++  ++TC I     G  S  ++ L +TR
Sbjct: 233 SLNAYLIKNQTITCPIKVSWRGNYSCLKVDLIFTR 267


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = -1

Query: 463 SLGNYKLETLSLTCSIVADEAGFISRSEIRLPYTR 359
           SL  Y ++  ++TC I     G  S  ++ L +TR
Sbjct: 284 SLNAYLIKNQTITCPIKVSWRGNYSCLKVDLIFTR 318


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = -1

Query: 463 SLGNYKLETLSLTCSIVADEAGFISRSEIRLPYTR 359
           SL  Y ++  ++TC I     G  S  ++ L +TR
Sbjct: 233 SLNAYLIKNQTITCPIKVSWRGNYSCLKVDLIFTR 267


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,007
Number of Sequences: 438
Number of extensions: 2658
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12805416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)