Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_J06
         (623 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            31   0.030
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    27   0.48 
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    25   1.5  
AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.         25   2.6  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    24   4.5  
Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein...    23   6.0  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    23   6.0  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   7.9  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 31.1 bits (67), Expect = 0.030
 Identities = 18/41 (43%), Positives = 22/41 (53%)
 Frame = -1

Query: 497 QRASPRSGTDPDRTGRSPRPPDRSGKVLHDSARPSQTGQVQ 375
           QR +  SG  P ++G SP  P R+G VLH  A   Q  Q Q
Sbjct: 118 QRDATSSGGRPGQSG-SPPDPTRNGIVLHHQAHQQQQQQQQ 157


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 27.1 bits (57), Expect = 0.48
 Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = -3

Query: 537 SCLSWCSRLRADLSAR-FASLRNRSRPNGSKSA 442
           +C  W   LRA +S + F SLR + + NGSK+A
Sbjct: 451 ACFEW---LRAGISGQVFFSLRQQGQGNGSKTA 480


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 4/41 (9%)
 Frame = -3

Query: 546 PCWSCLSWC----SRLRADLSARFASLRNRSRPNGSKSASA 436
           PCW C  W       +R   + R  ++  RS P+  + A A
Sbjct: 19  PCWDCTVWSMASNRTVRCPRTRRSEAVMTRSTPSSPRLAQA 59


>AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.
          Length = 93

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -1

Query: 146 GRTWLQLPAPTWPACRGRSVQIYLS 72
           GR W + P   WP+ R R   I LS
Sbjct: 23  GRRWPRPPTSCWPSRRSRLCIIALS 47


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 11/27 (40%), Positives = 12/27 (44%)
 Frame = +2

Query: 191 DDEAYNVYDKPWRNQDNIGTHIYRPTR 271
           DDE Y   D P    D + T   RP R
Sbjct: 791 DDEGYEEQDTPGETFDELPTASARPRR 817


>Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein
           protein.
          Length = 401

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 339 KNSLGRVVPTLVLDLSSLRRT 401
           K  L  ++PTL L+   LRRT
Sbjct: 324 KAHLEEILPTLALETEKLRRT 344


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +2

Query: 338 KEFAGTSSTNARSGPVQFEKDAPNREEPSRSGQ 436
           +E  G + T   +GP   + D     EP RSG+
Sbjct: 289 EEVYGATGTTTTTGPKGEKGDRGEPGEPGRSGE 321


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 10/35 (28%), Positives = 14/35 (40%)
 Frame = -1

Query: 500 CQRASPRSGTDPDRTGRSPRPPDRSGKVLHDSARP 396
           CQ        DP+  G   R      K +H++A P
Sbjct: 827 CQPCDCNGNVDPNAVGNCNRTTGECLKCIHNTAGP 861


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 598,686
Number of Sequences: 2352
Number of extensions: 11077
Number of successful extensions: 31
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60632475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)