Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_J04
(534 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB058756-1|BAB47482.1| 708|Homo sapiens KIAA1853 protein protein. 31 3.4
BC093660-1|AAH93660.1| 931|Homo sapiens transient receptor pote... 30 5.9
BC093658-1|AAH93658.1| 931|Homo sapiens transient receptor pote... 30 5.9
AJ271068-1|CAC01686.1| 876|Homo sapiens transient receptor pote... 30 5.9
AJ271067-1|CAC01685.1| 815|Homo sapiens transient receptor pote... 30 5.9
AJ271066-1|CAC01684.1| 931|Homo sapiens transient receptor pote... 30 5.9
AJ006276-1|CAA06943.1| 931|Homo sapiens transient receptor pote... 30 5.9
AF080394-1|AAC63289.2| 931|Homo sapiens transient receptor pote... 30 5.9
>AB058756-1|BAB47482.1| 708|Homo sapiens KIAA1853 protein protein.
Length = 708
Score = 30.7 bits (66), Expect = 3.4
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = -2
Query: 383 PESSHYD*RHRCERRSQMHQSCP*TCSPLRHR 288
P SH HRC RSQ +S P +C RHR
Sbjct: 274 PRKSHRHRHHRCPSRSQSSESRPSSCES-RHR 304
>BC093660-1|AAH93660.1| 931|Homo sapiens transient receptor potential
cation channel, subfamily C, member 6 protein.
Length = 931
Score = 29.9 bits (64), Expect = 5.9
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Frame = -1
Query: 513 KYLENEKL-VLGSHEDL------MKGVSNFFQPALKSSDVVGVLKRFSFPPRE*SLRLKT 355
K E +KL +LGSHEDL K V + QP+++SS+ L F+ PPR+ +K
Sbjct: 803 KINEEKKLGILGSHEDLSKLSLDKKQVGHNKQPSIRSSEDFH-LNSFNNPPRQYQKIMKR 861
Query: 354 SV*AAVADAPI 322
+ V A I
Sbjct: 862 LIKRYVLQAQI 872
>BC093658-1|AAH93658.1| 931|Homo sapiens transient receptor potential
cation channel, subfamily C, member 6 protein.
Length = 931
Score = 29.9 bits (64), Expect = 5.9
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Frame = -1
Query: 513 KYLENEKL-VLGSHEDL------MKGVSNFFQPALKSSDVVGVLKRFSFPPRE*SLRLKT 355
K E +KL +LGSHEDL K V + QP+++SS+ L F+ PPR+ +K
Sbjct: 803 KINEEKKLGILGSHEDLSKLSLDKKQVGHNKQPSIRSSEDFH-LNSFNNPPRQYQKIMKR 861
Query: 354 SV*AAVADAPI 322
+ V A I
Sbjct: 862 LIKRYVLQAQI 872
>AJ271068-1|CAC01686.1| 876|Homo sapiens transient receptor
potential channel 6, variant delta377-431 protein.
Length = 876
Score = 29.9 bits (64), Expect = 5.9
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Frame = -1
Query: 513 KYLENEKL-VLGSHEDL------MKGVSNFFQPALKSSDVVGVLKRFSFPPRE*SLRLKT 355
K E +KL +LGSHEDL K V + QP+++SS+ L F+ PPR+ +K
Sbjct: 748 KINEEKKLGILGSHEDLSKLSLDKKQVGHNKQPSIRSSEDFH-LNSFNNPPRQYQKIMKR 806
Query: 354 SV*AAVADAPI 322
+ V A I
Sbjct: 807 LIKRYVLQAQI 817
>AJ271067-1|CAC01685.1| 815|Homo sapiens transient receptor
potential channel 6, variant delta316-431 protein.
Length = 815
Score = 29.9 bits (64), Expect = 5.9
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Frame = -1
Query: 513 KYLENEKL-VLGSHEDL------MKGVSNFFQPALKSSDVVGVLKRFSFPPRE*SLRLKT 355
K E +KL +LGSHEDL K V + QP+++SS+ L F+ PPR+ +K
Sbjct: 687 KINEEKKLGILGSHEDLSKLSLDKKQVGHNKQPSIRSSEDFH-LNSFNNPPRQYQKIMKR 745
Query: 354 SV*AAVADAPI 322
+ V A I
Sbjct: 746 LIKRYVLQAQI 756
>AJ271066-1|CAC01684.1| 931|Homo sapiens transient receptor potential
channel 6 protein.
Length = 931
Score = 29.9 bits (64), Expect = 5.9
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Frame = -1
Query: 513 KYLENEKL-VLGSHEDL------MKGVSNFFQPALKSSDVVGVLKRFSFPPRE*SLRLKT 355
K E +KL +LGSHEDL K V + QP+++SS+ L F+ PPR+ +K
Sbjct: 803 KINEEKKLGILGSHEDLSKLSLDKKQVGHNKQPSIRSSEDFH-LNSFNNPPRQYQKIMKR 861
Query: 354 SV*AAVADAPI 322
+ V A I
Sbjct: 862 LIKRYVLQAQI 872
>AJ006276-1|CAA06943.1| 931|Homo sapiens transient receptor potential
protein protein.
Length = 931
Score = 29.9 bits (64), Expect = 5.9
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Frame = -1
Query: 513 KYLENEKL-VLGSHEDL------MKGVSNFFQPALKSSDVVGVLKRFSFPPRE*SLRLKT 355
K E +KL +LGSHEDL K V + QP+++SS+ L F+ PPR+ +K
Sbjct: 803 KINEEKKLGILGSHEDLSKLSLDKKQVGHNKQPSIRSSEDFH-LNSFNNPPRQYQKIMKR 861
Query: 354 SV*AAVADAPI 322
+ V A I
Sbjct: 862 LIKRYVLQAQI 872
>AF080394-1|AAC63289.2| 931|Homo sapiens transient receptor potential
protein 6 protein.
Length = 931
Score = 29.9 bits (64), Expect = 5.9
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Frame = -1
Query: 513 KYLENEKL-VLGSHEDL------MKGVSNFFQPALKSSDVVGVLKRFSFPPRE*SLRLKT 355
K E +KL +LGSHEDL K V + QP+++SS+ L F+ PPR+ +K
Sbjct: 803 KINEEKKLGILGSHEDLSKLSLDKKQVGHNKQPSIRSSEDFH-LNSFNNPPRQYQKIMKR 861
Query: 354 SV*AAVADAPI 322
+ V A I
Sbjct: 862 LIKRYVLQAQI 872
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,236,209
Number of Sequences: 237096
Number of extensions: 1895609
Number of successful extensions: 3439
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3365
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3439
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5216942984
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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