Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_J03
(585 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 25 0.72
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 23 2.2
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 23 2.2
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 23 2.2
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 23 2.2
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 23 2.2
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 23 2.2
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 23 2.2
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 23 2.2
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 23 2.2
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 23 2.9
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 5.1
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 21 6.7
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 21 8.9
AF393497-1|AAL60422.1| 143|Apis mellifera odorant binding prote... 21 8.9
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 24.6 bits (51), Expect = 0.72
Identities = 12/19 (63%), Positives = 16/19 (84%), Gaps = 1/19 (5%)
Frame = +2
Query: 518 LVHLRPPHTP-MSLTATTT 571
+VH PPH+P ++LTATTT
Sbjct: 1362 IVHA-PPHSPQITLTATTT 1379
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.2
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +1
Query: 397 HNNNHDFSAKAFATKNMPNIPQVP 468
+NNN++ + K N+ NI Q+P
Sbjct: 97 YNNNYNTNYKKLQYYNIINIEQIP 120
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.2
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +1
Query: 397 HNNNHDFSAKAFATKNMPNIPQVP 468
+NNN++ + K N+ NI Q+P
Sbjct: 97 YNNNYNTNYKKLQYYNIINIEQIP 120
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.2
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +1
Query: 397 HNNNHDFSAKAFATKNMPNIPQVP 468
+NNN++ + K N+ NI Q+P
Sbjct: 97 YNNNYNTNYKKLQYYNIINIEQIP 120
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.2
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +1
Query: 397 HNNNHDFSAKAFATKNMPNIPQVP 468
+NNN++ + K N+ NI Q+P
Sbjct: 97 YNNNYNTNYKKLQYYNIINIEQIP 120
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.2
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +1
Query: 397 HNNNHDFSAKAFATKNMPNIPQVP 468
+NNN++ + K N+ NI Q+P
Sbjct: 97 YNNNYNTNYKKLQYYNIINIEQIP 120
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.2
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +1
Query: 397 HNNNHDFSAKAFATKNMPNIPQVP 468
+NNN++ + K N+ NI Q+P
Sbjct: 97 YNNNYNTNYKKLQYYNIINIEQIP 120
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.0 bits (47), Expect = 2.2
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +1
Query: 397 HNNNHDFSAKAFATKNMPNIPQVP 468
+NNN++ + K N+ NI Q+P
Sbjct: 101 YNNNYNTNYKKLQYYNIINIEQIP 124
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.2
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +1
Query: 397 HNNNHDFSAKAFATKNMPNIPQVP 468
+NNN++ + K N+ NI Q+P
Sbjct: 97 YNNNYNTNYKKLQYYNIINIEQIP 120
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.0 bits (47), Expect = 2.2
Identities = 8/27 (29%), Positives = 17/27 (62%)
Frame = +1
Query: 388 NLFHNNNHDFSAKAFATKNMPNIPQVP 468
N ++ NN++++ K + + NI Q+P
Sbjct: 102 NKYNYNNNNYNKKLYYKNYIINIEQIP 128
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 22.6 bits (46), Expect = 2.9
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = +3
Query: 405 QPRFQCQSIRH*KHAKYSSSSELQHCR 485
QP F+C+ + +Y S+ L H R
Sbjct: 418 QPAFRCKPSQRFASGRYYSAYSLHHVR 444
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.8 bits (44), Expect = 5.1
Identities = 9/28 (32%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +1
Query: 388 NLFHNNNHD-FSAKAFATKNMPNIPQVP 468
N ++NNN++ ++ K + + NI Q+P
Sbjct: 331 NNYNNNNYNNYNKKLYYKNYIINIEQIP 358
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 21.4 bits (43), Expect = 6.7
Identities = 10/45 (22%), Positives = 17/45 (37%)
Frame = +1
Query: 388 NLFHNNNHDFSAKAFATKNMPNIPQVPNFNTVGAGVDYMFKDKIG 522
+L N N DF + P++ P ++ G D +G
Sbjct: 349 HLISNENRDFQTTPTVSVEQPHLFLYPEVSSTYTGFGIQSTDFVG 393
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 21.0 bits (42), Expect = 8.9
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -1
Query: 504 HVVHSGTDSVEVRNLRNIWHVFSGE 430
H H V+V NLR V +GE
Sbjct: 39 HCSHCDRQFVQVANLRRHLRVHTGE 63
>AF393497-1|AAL60422.1| 143|Apis mellifera odorant binding protein
ASP5 protein.
Length = 143
Score = 21.0 bits (42), Expect = 8.9
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = -1
Query: 120 LRLILILFDVVTRLFNKHVTAVDADQENRH*EQLSEHLR 4
++ +L+L +VT + K V ++ ADQ E+L++++R
Sbjct: 3 VKSVLLLITIVTFVALKPVKSMSADQV----EKLAKNMR 37
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.315 0.131 0.381
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,202
Number of Sequences: 438
Number of extensions: 3690
Number of successful extensions: 18
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16993167
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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