Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_I23
(591 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93380-4|CAB07597.1| 339|Caenorhabditis elegans Hypothetical pr... 32 0.27
AF036688-4|AAB88313.1| 233|Caenorhabditis elegans Hypothetical ... 30 1.4
AF125958-1|AAD14729.1| 342|Caenorhabditis elegans Serpentine re... 29 2.5
AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical ... 29 2.5
Z81468-4|CAB03877.1| 394|Caenorhabditis elegans Hypothetical pr... 29 3.3
AL021181-1|CAA15983.1| 394|Caenorhabditis elegans Hypothetical ... 29 3.3
Z35640-6|CAA84702.2| 1226|Caenorhabditis elegans Hypothetical pr... 28 4.3
Z35639-9|CAA84700.2| 1226|Caenorhabditis elegans Hypothetical pr... 28 4.3
Z92830-8|CAB07353.1| 537|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z82261-7|CAH60757.2| 300|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z93388-15|CAB07667.1| 356|Caenorhabditis elegans Hypothetical p... 27 7.5
Z93374-10|CAB07561.1| 356|Caenorhabditis elegans Hypothetical p... 27 7.5
Z81455-3|CAB03808.2| 890|Caenorhabditis elegans Hypothetical pr... 27 7.5
U97002-4|AAB52267.1| 630|Caenorhabditis elegans Hypothetical pr... 27 7.5
AL032623-19|CAA21519.2| 890|Caenorhabditis elegans Hypothetical... 27 7.5
AF025463-7|AAB71007.1| 1210|Caenorhabditis elegans Hypothetical ... 27 7.5
AF016419-2|AAG24055.2| 325|Caenorhabditis elegans Serpentine re... 27 7.5
Z81142-8|CAO82053.1| 370|Caenorhabditis elegans Hypothetical pr... 27 10.0
Z74039-9|CAA98507.1| 564|Caenorhabditis elegans Hypothetical pr... 27 10.0
U88184-8|AAK31515.1| 301|Caenorhabditis elegans Hypothetical pr... 27 10.0
U80027-3|AAC48131.1| 350|Caenorhabditis elegans Serpentine rece... 27 10.0
U19747-1|AAA92689.1| 564|Caenorhabditis elegans nicotinic acety... 27 10.0
U19746-1|AAA92688.1| 564|Caenorhabditis elegans nicotinic acety... 27 10.0
>Z93380-4|CAB07597.1| 339|Caenorhabditis elegans Hypothetical
protein F28C12.5 protein.
Length = 339
Score = 32.3 bits (70), Expect = 0.27
Identities = 20/69 (28%), Positives = 34/69 (49%)
Frame = +1
Query: 346 IFCSILMIFLALHLIFTILLVVGVHKNKHGYVKAYVIYASILFGMSVLATITNLIRIKYL 525
I S+L++ L L L+ + GVH GYV + Y + S + T+ ++ + L
Sbjct: 151 IAVSLLVLQLLLTLVSFYIAYYGVHLA--GYVPVCIHYPRLAVHYSTVNTVRTVVMVCCL 208
Query: 526 SIIGFIFNL 552
+ GFI+ L
Sbjct: 209 VVTGFIYYL 217
>AF036688-4|AAB88313.1| 233|Caenorhabditis elegans Hypothetical
protein C24D10.4 protein.
Length = 233
Score = 29.9 bits (64), Expect = 1.4
Identities = 32/119 (26%), Positives = 43/119 (36%), Gaps = 5/119 (4%)
Frame = +1
Query: 64 NGEGTATENRRAPPPPYVSVEAQPVNVVTSSKYYDSYTCCGIFPLKTGCL-IIGYYNLV- 237
+G G NR PPPP + V ++ G P+ G L I Y LV
Sbjct: 104 DGMGNLNTNRGPPPPPVKGINVPLVAIILGLLSRAIMLLTG--PINIGILWAIFYVTLVS 161
Query: 238 --SAVCXXXXXXXXXXXXNNYMDPNNNTEK-RNLGLTLVIFCSILMIFLALHLIFTILL 405
SAV M NN EK N G ++ F + F A L+ ++L
Sbjct: 162 RFSAVGLNNQTRNELAAVFQAMGNNNQFEKIMNAGFKIIEFIQTTVSFAASFLLAHMIL 220
>AF125958-1|AAD14729.1| 342|Caenorhabditis elegans Serpentine
receptor, class j protein9 protein.
Length = 342
Score = 29.1 bits (62), Expect = 2.5
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = +1
Query: 358 ILMIFLALHLIFTILLVVGVHKNKHGYVKAYV---IYASILFGMSVLATITNLIRIKY-L 525
I IF L+ I IL +G+ NKHG+V + G V++ I + Y L
Sbjct: 47 IFAIFDILYSISEILTPIGITGNKHGFVVFLTEGPFFEHPEIGQHVMSNRCGFISLSYAL 106
Query: 526 SIIGFIF 546
II F++
Sbjct: 107 LIIHFVY 113
>AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical
protein Y45G5AL.2 protein.
Length = 404
Score = 29.1 bits (62), Expect = 2.5
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +1
Query: 292 YMDPNNNTEKRNLGLTLVIFCSILMIFLA 378
+MD NN +EK +G+T ++ S +++ LA
Sbjct: 284 FMDINNRSEKFTVGMTNIMSMSFILVILA 312
>Z81468-4|CAB03877.1| 394|Caenorhabditis elegans Hypothetical
protein Y54G11B.1 protein.
Length = 394
Score = 28.7 bits (61), Expect = 3.3
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +3
Query: 333 LNFGDILLYINDISC-VAFDIYNITSSRCAQ 422
LN D+L ++ I+C VAF +Y+ TSSR Q
Sbjct: 297 LNLADVLDLLSLINCYVAFLVYSFTSSRYRQ 327
>AL021181-1|CAA15983.1| 394|Caenorhabditis elegans Hypothetical
protein Y54G11B.1 protein.
Length = 394
Score = 28.7 bits (61), Expect = 3.3
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +3
Query: 333 LNFGDILLYINDISC-VAFDIYNITSSRCAQ 422
LN D+L ++ I+C VAF +Y+ TSSR Q
Sbjct: 297 LNLADVLDLLSLINCYVAFLVYSFTSSRYRQ 327
>Z35640-6|CAA84702.2| 1226|Caenorhabditis elegans Hypothetical protein
F43D9.1 protein.
Length = 1226
Score = 28.3 bits (60), Expect = 4.3
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 97 APPPPYVSVEAQPVNVVTSSKYYDS 171
APPP Y+++ A PVN + Y S
Sbjct: 1078 APPPHYLAIAAPPVNSIYGQTEYTS 1102
>Z35639-9|CAA84700.2| 1226|Caenorhabditis elegans Hypothetical protein
F43D9.1 protein.
Length = 1226
Score = 28.3 bits (60), Expect = 4.3
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 97 APPPPYVSVEAQPVNVVTSSKYYDS 171
APPP Y+++ A PVN + Y S
Sbjct: 1078 APPPHYLAIAAPPVNSIYGQTEYTS 1102
>Z92830-8|CAB07353.1| 537|Caenorhabditis elegans Hypothetical
protein F11A5.9 protein.
Length = 537
Score = 27.9 bits (59), Expect = 5.7
Identities = 14/59 (23%), Positives = 30/59 (50%)
Frame = +1
Query: 313 TEKRNLGLTLVIFCSILMIFLALHLIFTILLVVGVHKNKHGYVKAYVIYASILFGMSVL 489
T + ++ + + ++L F + IFT+ + + + G+ Y I+A + FG+ VL
Sbjct: 187 TRQWSMQVQSAFYIAVLTTFFQIGPIFTMPVAGALCTSSLGWPAVYYIHAVVTFGLFVL 245
>Z82261-7|CAH60757.2| 300|Caenorhabditis elegans Hypothetical
protein C35D6.10 protein.
Length = 300
Score = 27.9 bits (59), Expect = 5.7
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = +1
Query: 358 ILMIFLALHLIFTILLVVGVHKNKHGYVKAY-VIYASILFGMSVLATITNLIRIKYLSII 534
+L IFL F I + +G +K A I A ILF M++ + +++L+ + L+ I
Sbjct: 145 VLYIFLVFKE-FGIYVGIGCTVDKDMQPSALGYIQAIILFCMAMSSVLSSLLHLSILNKI 203
Query: 535 GFIFNLIQTCISGYYLYL 588
+ L T ++ Y+Y+
Sbjct: 204 RKLAYLESTQLNNLYIYI 221
>Z93388-15|CAB07667.1| 356|Caenorhabditis elegans Hypothetical
protein C06C6.1 protein.
Length = 356
Score = 27.5 bits (58), Expect = 7.5
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +1
Query: 346 IFCSILMIFLALHLIFTILLVVGVHKNKHGYVKAYVIYASILFGMSVLATITNLIRI 516
+FC+ FL L ++F +GV+K ++ YV + FG L T+ NLI +
Sbjct: 38 MFCNF---FLLLLIVFKSPSDMGVYK----FLMIYVAIFELFFGWLELMTVANLISV 87
>Z93374-10|CAB07561.1| 356|Caenorhabditis elegans Hypothetical
protein C06C6.1 protein.
Length = 356
Score = 27.5 bits (58), Expect = 7.5
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +1
Query: 346 IFCSILMIFLALHLIFTILLVVGVHKNKHGYVKAYVIYASILFGMSVLATITNLIRI 516
+FC+ FL L ++F +GV+K ++ YV + FG L T+ NLI +
Sbjct: 38 MFCNF---FLLLLIVFKSPSDMGVYK----FLMIYVAIFELFFGWLELMTVANLISV 87
>Z81455-3|CAB03808.2| 890|Caenorhabditis elegans Hypothetical
protein B0399.2 protein.
Length = 890
Score = 27.5 bits (58), Expect = 7.5
Identities = 18/73 (24%), Positives = 34/73 (46%)
Frame = +1
Query: 373 LALHLIFTILLVVGVHKNKHGYVKAYVIYASILFGMSVLATITNLIRIKYLSIIGFIFNL 552
LA+ +FT L V N GY+ + + ++ G + +T++ K I GF +
Sbjct: 11 LAILFVFTYHLYPSVFPN--GYLGVDIFF--VISGFLMARNLTHVKITKISQIFGFYYRR 66
Query: 553 IQTCISGYYLYLI 591
+ + YYL ++
Sbjct: 67 FRRILPLYYLSIV 79
>U97002-4|AAB52267.1| 630|Caenorhabditis elegans Hypothetical
protein K09H11.4 protein.
Length = 630
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -2
Query: 500 VIVANTLMPKSIEAYIT*ALTYPCLFLCTPTTSNIV 393
++ A T +P + I A+TYP + TP+ S IV
Sbjct: 574 ILDATTALPTTSSPPILSAITYPVISTTTPSPSGIV 609
>AL032623-19|CAA21519.2| 890|Caenorhabditis elegans Hypothetical
protein B0399.2 protein.
Length = 890
Score = 27.5 bits (58), Expect = 7.5
Identities = 18/73 (24%), Positives = 34/73 (46%)
Frame = +1
Query: 373 LALHLIFTILLVVGVHKNKHGYVKAYVIYASILFGMSVLATITNLIRIKYLSIIGFIFNL 552
LA+ +FT L V N GY+ + + ++ G + +T++ K I GF +
Sbjct: 11 LAILFVFTYHLYPSVFPN--GYLGVDIFF--VISGFLMARNLTHVKITKISQIFGFYYRR 66
Query: 553 IQTCISGYYLYLI 591
+ + YYL ++
Sbjct: 67 FRRILPLYYLSIV 79
>AF025463-7|AAB71007.1| 1210|Caenorhabditis elegans Hypothetical
protein K10B4.1 protein.
Length = 1210
Score = 27.5 bits (58), Expect = 7.5
Identities = 14/61 (22%), Positives = 26/61 (42%)
Frame = +1
Query: 64 NGEGTATENRRAPPPPYVSVEAQPVNVVTSSKYYDSYTCCGIFPLKTGCLIIGYYNLVSA 243
N +GTA R +VS P+ V + +++ ++C +GY N ++
Sbjct: 753 NSDGTALNCSRCDSGRFVSPSCFPIPVPVNDVHFEPFSCLSFVRSLPAQKTLGYRNQMNQ 812
Query: 244 V 246
V
Sbjct: 813 V 813
>AF016419-2|AAG24055.2| 325|Caenorhabditis elegans Serpentine
receptor, class j protein32 protein.
Length = 325
Score = 27.5 bits (58), Expect = 7.5
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +1
Query: 355 SILMIFLALHLIFTILLVVGVHKNKHGYVKAYVIYAS--ILFGMSVLATITNLIRIKYLS 528
+ L+ + A+ IF LL + V HGY Y+I+ S IL S L+ + IR ++
Sbjct: 40 AFLLYYFAIFNIFHSLLDIFVPIGVHGYRYCYLIFLSDGILLEKSSLSMLLLAIRCSLIA 99
>Z81142-8|CAO82053.1| 370|Caenorhabditis elegans Hypothetical
protein ZK1037.13 protein.
Length = 370
Score = 27.1 bits (57), Expect = 10.0
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 339 FGDILLYINDISCVAFDIYNIT 404
FG++LL +N + C YN T
Sbjct: 328 FGEVLLLVNSVRCAVILFYNYT 349
>Z74039-9|CAA98507.1| 564|Caenorhabditis elegans Hypothetical
protein K03B8.9 protein.
Length = 564
Score = 27.1 bits (57), Expect = 10.0
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +1
Query: 304 NNNTEKRNLGLTLVIFCSILMIFLA 378
++ TEK NLG+T ++ SILM+ ++
Sbjct: 296 DDRTEKINLGITTLLAMSILMLMVS 320
>U88184-8|AAK31515.1| 301|Caenorhabditis elegans Hypothetical
protein F36H5.4 protein.
Length = 301
Score = 27.1 bits (57), Expect = 10.0
Identities = 17/81 (20%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Frame = +1
Query: 349 FCSILMIFLALHLIFTILLVVGVHKNKHGYVKAY----VIYASILFGMSVLATITNLIRI 516
+C ++ ++L+ ILL + +K K +K+Y + A+ L +++L + +++ +
Sbjct: 85 YCWTTLVICLVYLVQAILLHIRFYKRKQFTIKSYCSKRYLMAATLVFLNILFLVNSIVGL 144
Query: 517 -KYLSIIGFIFNLIQTCISGY 576
++I + L+ C GY
Sbjct: 145 YSRIAIDISLVILLIICFFGY 165
>U80027-3|AAC48131.1| 350|Caenorhabditis elegans Serpentine
receptor, class j protein7 protein.
Length = 350
Score = 27.1 bits (57), Expect = 10.0
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = +1
Query: 367 IFLALHLIFTILLVVGVHKNKHGYV---KAYVIYASILFGMSVLATITNLIRIKY-LSII 534
+F L+ I IL +GV NKHG+V + + G ++ I I Y L II
Sbjct: 50 VFDILYSISEILTPLGVQGNKHGFVVFISDGLFFEYPELGQHAMSNRCGFISISYALLII 109
Query: 535 GFIF 546
F++
Sbjct: 110 HFVY 113
>U19747-1|AAA92689.1| 564|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit precursor protein.
Length = 564
Score = 27.1 bits (57), Expect = 10.0
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +1
Query: 304 NNNTEKRNLGLTLVIFCSILMIFLA 378
++ TEK NLG+T ++ SILM+ ++
Sbjct: 296 DDRTEKINLGITTLLAMSILMLMVS 320
>U19746-1|AAA92688.1| 564|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit protein.
Length = 564
Score = 27.1 bits (57), Expect = 10.0
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +1
Query: 304 NNNTEKRNLGLTLVIFCSILMIFLA 378
++ TEK NLG+T ++ SILM+ ++
Sbjct: 296 DDRTEKINLGITTLLAMSILMLMVS 320
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,553,190
Number of Sequences: 27780
Number of extensions: 276844
Number of successful extensions: 955
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 955
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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