Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_I21
(361 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g22300.1 68417.m03225 phospholipase/carboxylesterase family p... 27 2.8
At4g21440.1 68417.m03099 myb family transcription factor (MYB102... 27 3.8
At5g43990.2 68418.m05382 SET domain-containing protein identical... 27 5.0
At5g43990.1 68418.m05383 SET domain-containing protein identical... 27 5.0
At5g09410.1 68418.m01090 calmodulin-binding protein similar to a... 27 5.0
At5g65160.1 68418.m08195 tetratricopeptide repeat (TPR)-containi... 26 6.6
At1g05830.1 68414.m00610 trithorax protein, putative / PHD finge... 26 6.6
At5g55530.3 68418.m06918 C2 domain-containing protein low simila... 26 8.7
At5g55530.2 68418.m06917 C2 domain-containing protein low simila... 26 8.7
At5g55530.1 68418.m06916 C2 domain-containing protein low simila... 26 8.7
At5g39910.1 68418.m04840 glycoside hydrolase family 28 protein /... 26 8.7
At5g22420.1 68418.m02615 acyl CoA reductase, putative similar to... 26 8.7
>At4g22300.1 68417.m03225 phospholipase/carboxylesterase family
protein similar to acyl-protein thioesterase-1 [Homo
sapiens] GI:9965372; contains Pfam profile PF02230:
Phospholipase/Carboxylesterase family
Length = 471
Score = 27.5 bits (58), Expect = 2.8
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -3
Query: 161 LAGAPWSWPTAPADPHIVQCSNQALQRA 78
L+ A W +P+AP +P V C+N A+ R+
Sbjct: 31 LSNASWLFPSAPFNP--VTCNNGAVMRS 56
>At4g21440.1 68417.m03099 myb family transcription factor (MYB102)
contains Pfam profile: PF00249 myb-like DNA-binding
domain
Length = 350
Score = 27.1 bits (57), Expect = 3.8
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +3
Query: 27 PSYSSYQFFWSASTAGTCSLKSLVTTLNNMRISRSSGPT 143
PSYS F ++ S T S TTLN+ I+ SS T
Sbjct: 285 PSYSDQSFNFANSVLNTPSSSPSPTTLNSSYINSSSCST 323
>At5g43990.2 68418.m05382 SET domain-containing protein identical to
SET domain protein SUVR2 [Arabidopsis thaliana]
GI:15290521; contains Pfam profiles PF00856: SET domain,
PF05033: Pre-SET motif; identical to cDNA SET domain
protein SUVR2 GI:15290520
Length = 740
Score = 26.6 bits (56), Expect = 5.0
Identities = 17/76 (22%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +2
Query: 137 ANSRVRRQAGALTVNSDGTSGAMVKVPITGNENHRLSALGSVDLTNQMKLGAATAGLAYD 316
+N V +AG +DGT+ + + +H+L+A +++ ++L ++ +G
Sbjct: 219 SNGHVEEKAGETVSTADGTTNDISPTTVARFSDHKLAA--TIEEPPALELASSASGEVKI 276
Query: 317 NVNGHGAT-LTKTHIP 361
N++ AT + H+P
Sbjct: 277 NLSFAPATGGSNPHLP 292
>At5g43990.1 68418.m05383 SET domain-containing protein identical to
SET domain protein SUVR2 [Arabidopsis thaliana]
GI:15290521; contains Pfam profiles PF00856: SET domain,
PF05033: Pre-SET motif; identical to cDNA SET domain
protein SUVR2 GI:15290520
Length = 717
Score = 26.6 bits (56), Expect = 5.0
Identities = 17/76 (22%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +2
Query: 137 ANSRVRRQAGALTVNSDGTSGAMVKVPITGNENHRLSALGSVDLTNQMKLGAATAGLAYD 316
+N V +AG +DGT+ + + +H+L+A +++ ++L ++ +G
Sbjct: 196 SNGHVEEKAGETVSTADGTTNDISPTTVARFSDHKLAA--TIEEPPALELASSASGEVKI 253
Query: 317 NVNGHGAT-LTKTHIP 361
N++ AT + H+P
Sbjct: 254 NLSFAPATGGSNPHLP 269
>At5g09410.1 68418.m01090 calmodulin-binding protein similar to
anther ethylene-upregulated calmodulin-binding protein
ER1 GI:11612392 from [Nicotiana tabacum]
Length = 1007
Score = 26.6 bits (56), Expect = 5.0
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +1
Query: 154 PASGCTNCQLRRHLRCYGQGTYNWKRKSQAQCPWLRRSH*PNEVGS 291
PASG R+ LR + + +NW++K + +R +H +VGS
Sbjct: 55 PASGSLFLFDRKVLRYFRKDGHNWRKKKDGKT--IREAHEKLKVGS 98
>At5g65160.1 68418.m08195 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515 TPR Domain
Length = 593
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 263 DLTNQMKLGAATAGLAYDNVNGHGATLT 346
+L N + G TAG+ Y N NG+G T
Sbjct: 180 NLGNLNQTGPVTAGVNYGNNNGYGVKRT 207
>At1g05830.1 68414.m00610 trithorax protein, putative / PHD finger
family protein / SET domain-containing protein similar
to trithorax-like protein 1 [Arabidopsis thaliana]
GI:12659210; contains Pfam domain, PF00628: PHD-finger
and PF00856: SET domain
Length = 1056
Score = 26.2 bits (55), Expect = 6.6
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 166 CTNCQLRRHLRCYGQ 210
C C++ H RCYGQ
Sbjct: 611 CDKCRMMVHTRCYGQ 625
>At5g55530.3 68418.m06918 C2 domain-containing protein low
similarity to cold-regulated gene SRC2 [Glycine max]
GI:2055230; contains Pfam profile PF00168: C2 domain
Length = 405
Score = 25.8 bits (54), Expect = 8.7
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = +2
Query: 173 TVNSDGTSGAMVKVPITGNENHRLSALGSVDLTNQMKLGAATAGLAYDNVNGHGATLTKT 352
T++S+ TS ++V + ENH +++ S+ + + AT G A + + H AT T
Sbjct: 242 TIDSE-TSDSLVT---SDAENHVTNSVTSILKQDSPESSNATNGAASPHASAHSATETPN 297
Query: 353 H 355
H
Sbjct: 298 H 298
>At5g55530.2 68418.m06917 C2 domain-containing protein low
similarity to cold-regulated gene SRC2 [Glycine max]
GI:2055230; contains Pfam profile PF00168: C2 domain
Length = 405
Score = 25.8 bits (54), Expect = 8.7
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = +2
Query: 173 TVNSDGTSGAMVKVPITGNENHRLSALGSVDLTNQMKLGAATAGLAYDNVNGHGATLTKT 352
T++S+ TS ++V + ENH +++ S+ + + AT G A + + H AT T
Sbjct: 242 TIDSE-TSDSLVT---SDAENHVTNSVTSILKQDSPESSNATNGAASPHASAHSATETPN 297
Query: 353 H 355
H
Sbjct: 298 H 298
>At5g55530.1 68418.m06916 C2 domain-containing protein low
similarity to cold-regulated gene SRC2 [Glycine max]
GI:2055230; contains Pfam profile PF00168: C2 domain
Length = 405
Score = 25.8 bits (54), Expect = 8.7
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = +2
Query: 173 TVNSDGTSGAMVKVPITGNENHRLSALGSVDLTNQMKLGAATAGLAYDNVNGHGATLTKT 352
T++S+ TS ++V + ENH +++ S+ + + AT G A + + H AT T
Sbjct: 242 TIDSE-TSDSLVT---SDAENHVTNSVTSILKQDSPESSNATNGAASPHASAHSATETPN 297
Query: 353 H 355
H
Sbjct: 298 H 298
>At5g39910.1 68418.m04840 glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein similar to
polygalacturonase PG1 [Glycine max] GI:5669846; contains
PF00295: Glycosyl hydrolases family 28
(polygalacturonases)
Length = 373
Score = 25.8 bits (54), Expect = 8.7
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 204 IAPEVPSELTVSAPACRRTLELAHCSG 124
IAPE P E + C + +E AH +G
Sbjct: 105 IAPESPYEWKCNKDDCHQWIEFAHING 131
>At5g22420.1 68418.m02615 acyl CoA reductase, putative similar to
acyl CoA reductase [Simmondsia chinensis] GI:5020215;
contains Pfam profile PF03015: Male sterility protein
Length = 409
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 23 FAKLFLVSVLLVGVNSRYVLVEEPGYYIEQY 115
FAK + LL+ V++ YV E PG+ +E++
Sbjct: 74 FAKKCVKPKLLLHVSTVYVCGERPGHIVEKH 104
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,843,207
Number of Sequences: 28952
Number of extensions: 144198
Number of successful extensions: 411
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 411
length of database: 12,070,560
effective HSP length: 72
effective length of database: 9,986,016
effective search space used: 469342752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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