Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_I20
         (514 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX255973-1|CAH73104.1|  335|Homo sapiens RP11-375E1__A.3 protein.      30   5.5  
BX255972-1|CAH73099.1|  335|Homo sapiens RP11-375E1__A.3 protein.      30   5.5  
BX255971-1|CAI23605.1|  335|Homo sapiens RP11-375E1__A.3 protein.      30   5.5  
BC021299-1|AAH21299.1|  335|Homo sapiens SAM pointed domain cont...    30   5.5  
AK126437-1|BAC86549.1|  229|Homo sapiens protein ( Homo sapiens ...    30   5.5  
AF071538-1|AAC95296.1|  335|Homo sapiens Ets transcription facto...    30   5.5  
AB031549-1|BAA89543.1|  335|Homo sapiens prostate ets protein.         30   5.5  

>BX255973-1|CAH73104.1|  335|Homo sapiens RP11-375E1__A.3 protein.
          Length = 335

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = -1

Query: 466 IMKTKCWVPKRTS*RAYRTCASRQ*SQATWMES*IGSVCRPDXSH 332
           I K+  W+ +RTS  A   CAS   S+ +W +S + S C     H
Sbjct: 208 IWKSAAWMKERTSPGAIHYCAST--SEESWTDSEVDSSCSGQPIH 250


>BX255972-1|CAH73099.1|  335|Homo sapiens RP11-375E1__A.3 protein.
          Length = 335

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = -1

Query: 466 IMKTKCWVPKRTS*RAYRTCASRQ*SQATWMES*IGSVCRPDXSH 332
           I K+  W+ +RTS  A   CAS   S+ +W +S + S C     H
Sbjct: 208 IWKSAAWMKERTSPGAIHYCAST--SEESWTDSEVDSSCSGQPIH 250


>BX255971-1|CAI23605.1|  335|Homo sapiens RP11-375E1__A.3 protein.
          Length = 335

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = -1

Query: 466 IMKTKCWVPKRTS*RAYRTCASRQ*SQATWMES*IGSVCRPDXSH 332
           I K+  W+ +RTS  A   CAS   S+ +W +S + S C     H
Sbjct: 208 IWKSAAWMKERTSPGAIHYCAST--SEESWTDSEVDSSCSGQPIH 250


>BC021299-1|AAH21299.1|  335|Homo sapiens SAM pointed domain
           containing ets transcription factor protein.
          Length = 335

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = -1

Query: 466 IMKTKCWVPKRTS*RAYRTCASRQ*SQATWMES*IGSVCRPDXSH 332
           I K+  W+ +RTS  A   CAS   S+ +W +S + S C     H
Sbjct: 208 IWKSAAWMKERTSPGAIHYCAST--SEESWTDSEVDSSCSGQPIH 250


>AK126437-1|BAC86549.1|  229|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44473 fis, clone UTERU2030213. ).
          Length = 229

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = +2

Query: 188 PRRRSRPEICPPFPIYHQP-TLLVVVSNICSRTRSVHQRAPL 310
           PR +SRP  C P  + H+P T     S  C +   VH++ P+
Sbjct: 160 PRPKSRPASCCPHSLRHRPLTSSPRSSQSCCQLFGVHRQRPI 201


>AF071538-1|AAC95296.1|  335|Homo sapiens Ets transcription factor
           PDEF protein.
          Length = 335

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = -1

Query: 466 IMKTKCWVPKRTS*RAYRTCASRQ*SQATWMES*IGSVCRPDXSH 332
           I K+  W+ +RTS  A   CAS   S+ +W +S + S C     H
Sbjct: 208 IWKSAAWMKERTSPGAIHYCAST--SEESWTDSEVDSSCSGQPIH 250


>AB031549-1|BAA89543.1|  335|Homo sapiens prostate ets protein.
          Length = 335

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = -1

Query: 466 IMKTKCWVPKRTS*RAYRTCASRQ*SQATWMES*IGSVCRPDXSH 332
           I K+  W+ +RTS  A   CAS   S+ +W +S + S C     H
Sbjct: 208 IWKSAAWMKERTSPGAIHYCAST--SEESWTDSEVDSSCSGQPIH 250


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,757,671
Number of Sequences: 237096
Number of extensions: 1825161
Number of successful extensions: 3461
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3403
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3461
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4820001670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)