Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_I19
(445 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC100827-1|AAI00828.1| 727|Homo sapiens synaptic vesicle glycop... 30 3.1
BC100826-1|AAI00827.1| 727|Homo sapiens synaptic vesicle glycop... 30 3.1
BC100825-1|AAI00826.1| 727|Homo sapiens synaptic vesicle glycop... 30 3.1
BC100824-1|AAI00825.1| 727|Homo sapiens synaptic vesicle glycop... 30 3.1
EF452236-1|ABO40479.1| 1866|Homo sapiens NOD4 protein. 30 4.1
AK090439-1|BAC03420.1| 1056|Homo sapiens FLJ00359 protein protein. 30 4.1
AK074182-1|BAB85008.1| 733|Homo sapiens FLJ00255 protein protein. 30 4.1
AK025362-1|BAB15120.1| 1097|Homo sapiens protein ( Homo sapiens ... 30 4.1
AF389420-1|AAO59377.1| 1866|Homo sapiens NOD27 protein. 30 4.1
BC091500-1|AAH91500.1| 829|Homo sapiens ODF2 protein protein. 29 7.2
AY319414-1|AAP83847.1| 657|Homo sapiens outer dense fiber of sp... 29 7.2
AL445287-4|CAH71067.1| 638|Homo sapiens outer dense fiber of sp... 29 7.2
AL359091-21|CAI13504.1| 205|Homo sapiens outer dense fiber of s... 29 7.2
AL359091-20|CAI13503.1| 180|Homo sapiens outer dense fiber of s... 29 7.2
AL359091-19|CAI13502.1| 156|Homo sapiens outer dense fiber of s... 29 7.2
AL359091-18|CAI13501.1| 141|Homo sapiens outer dense fiber of s... 29 7.2
AL359091-17|CAI13500.1| 638|Homo sapiens outer dense fiber of s... 29 7.2
AF012549-1|AAB66337.1| 638|Homo sapiens outer dense fiber prote... 29 7.2
>BC100827-1|AAI00828.1| 727|Homo sapiens synaptic vesicle
glycoprotein 2C protein.
Length = 727
Score = 30.3 bits (65), Expect = 3.1
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +3
Query: 57 VSPKTYHFKTKDVDAVFVERQKKVLSLFQDVDQVNVDDEYYKIGKDYDVEANID 218
V +T + VD E ++ S FQD + DD+YY G+ Y+ EAN D
Sbjct: 22 VKKQTVKKVNQAVDRAQDEYTQRSYSRFQDEED---DDDYYPAGETYNGEANDD 72
>BC100826-1|AAI00827.1| 727|Homo sapiens synaptic vesicle
glycoprotein 2C protein.
Length = 727
Score = 30.3 bits (65), Expect = 3.1
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +3
Query: 57 VSPKTYHFKTKDVDAVFVERQKKVLSLFQDVDQVNVDDEYYKIGKDYDVEANID 218
V +T + VD E ++ S FQD + DD+YY G+ Y+ EAN D
Sbjct: 22 VKKQTVKKVNQAVDRAQDEYTQRSYSRFQDEED---DDDYYPAGETYNGEANDD 72
>BC100825-1|AAI00826.1| 727|Homo sapiens synaptic vesicle
glycoprotein 2C protein.
Length = 727
Score = 30.3 bits (65), Expect = 3.1
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +3
Query: 57 VSPKTYHFKTKDVDAVFVERQKKVLSLFQDVDQVNVDDEYYKIGKDYDVEANID 218
V +T + VD E ++ S FQD + DD+YY G+ Y+ EAN D
Sbjct: 22 VKKQTVKKVNQAVDRAQDEYTQRSYSRFQDEED---DDDYYPAGETYNGEANDD 72
>BC100824-1|AAI00825.1| 727|Homo sapiens synaptic vesicle
glycoprotein 2C protein.
Length = 727
Score = 30.3 bits (65), Expect = 3.1
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +3
Query: 57 VSPKTYHFKTKDVDAVFVERQKKVLSLFQDVDQVNVDDEYYKIGKDYDVEANID 218
V +T + VD E ++ S FQD + DD+YY G+ Y+ EAN D
Sbjct: 22 VKKQTVKKVNQAVDRAQDEYTQRSYSRFQDEED---DDDYYPAGETYNGEANDD 72
>EF452236-1|ABO40479.1| 1866|Homo sapiens NOD4 protein.
Length = 1866
Score = 29.9 bits (64), Expect = 4.1
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 2 YEDCPSSSGAHCPRA-IQCGVTENVSLQDKRC 94
++ CP HCP A + CG EN+S + ++C
Sbjct: 669 FDGCPLEP--HCPEALVGCGQIENLSFKSRKC 698
>AK090439-1|BAC03420.1| 1056|Homo sapiens FLJ00359 protein protein.
Length = 1056
Score = 29.9 bits (64), Expect = 4.1
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 2 YEDCPSSSGAHCPRA-IQCGVTENVSLQDKRC 94
++ CP HCP A + CG EN+S + ++C
Sbjct: 396 FDGCPLEP--HCPEALVGCGQIENLSFKSRKC 425
>AK074182-1|BAB85008.1| 733|Homo sapiens FLJ00255 protein protein.
Length = 733
Score = 29.9 bits (64), Expect = 4.1
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 2 YEDCPSSSGAHCPRA-IQCGVTENVSLQDKRC 94
++ CP HCP A + CG EN+S + ++C
Sbjct: 682 FDGCPLEP--HCPEALVGCGQIENLSFKSRKC 711
>AK025362-1|BAB15120.1| 1097|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21709 fis, clone COL10077. ).
Length = 1097
Score = 29.9 bits (64), Expect = 4.1
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 2 YEDCPSSSGAHCPRA-IQCGVTENVSLQDKRC 94
++ CP HCP A + CG EN+S + ++C
Sbjct: 354 FDGCPLEP--HCPEALVGCGQIENLSFKSRKC 383
>AF389420-1|AAO59377.1| 1866|Homo sapiens NOD27 protein.
Length = 1866
Score = 29.9 bits (64), Expect = 4.1
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 2 YEDCPSSSGAHCPRA-IQCGVTENVSLQDKRC 94
++ CP HCP A + CG EN+S + ++C
Sbjct: 669 FDGCPLEP--HCPEALVGCGQIENLSFKSRKC 698
>BC091500-1|AAH91500.1| 829|Homo sapiens ODF2 protein protein.
Length = 829
Score = 29.1 bits (62), Expect = 7.2
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +2
Query: 17 SSSGAHCPRAIQCGVTENVSLQDKRCRRSVCGAP 118
SSSG PR CG SL K+ R+ CGAP
Sbjct: 4 SSSGGS-PRFPSCGKNGVTSLTQKKVLRAPCGAP 36
>AY319414-1|AAP83847.1| 657|Homo sapiens outer dense fiber of sperm
tails 2 isoform 3 protein.
Length = 657
Score = 29.1 bits (62), Expect = 7.2
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +2
Query: 17 SSSGAHCPRAIQCGVTENVSLQDKRCRRSVCGAP 118
SSSG PR CG SL K+ R+ CGAP
Sbjct: 4 SSSGGS-PRFPSCGKNGVTSLTQKKVLRAPCGAP 36
>AL445287-4|CAH71067.1| 638|Homo sapiens outer dense fiber of sperm
tails 2 protein.
Length = 638
Score = 29.1 bits (62), Expect = 7.2
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +2
Query: 17 SSSGAHCPRAIQCGVTENVSLQDKRCRRSVCGAP 118
SSSG PR CG SL K+ R+ CGAP
Sbjct: 4 SSSGGS-PRFPSCGKNGVTSLTQKKVLRAPCGAP 36
>AL359091-21|CAI13504.1| 205|Homo sapiens outer dense fiber of
sperm tails 2 protein.
Length = 205
Score = 29.1 bits (62), Expect = 7.2
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +2
Query: 17 SSSGAHCPRAIQCGVTENVSLQDKRCRRSVCGAP 118
SSSG PR CG SL K+ R+ CGAP
Sbjct: 4 SSSGGS-PRFPSCGKNGVTSLTQKKVLRAPCGAP 36
>AL359091-20|CAI13503.1| 180|Homo sapiens outer dense fiber of
sperm tails 2 protein.
Length = 180
Score = 29.1 bits (62), Expect = 7.2
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +2
Query: 17 SSSGAHCPRAIQCGVTENVSLQDKRCRRSVCGAP 118
SSSG PR CG SL K+ R+ CGAP
Sbjct: 4 SSSGGS-PRFPSCGKNGVTSLTQKKVLRAPCGAP 36
>AL359091-19|CAI13502.1| 156|Homo sapiens outer dense fiber of
sperm tails 2 protein.
Length = 156
Score = 29.1 bits (62), Expect = 7.2
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +2
Query: 17 SSSGAHCPRAIQCGVTENVSLQDKRCRRSVCGAP 118
SSSG PR CG SL K+ R+ CGAP
Sbjct: 4 SSSGGS-PRFPSCGKNGVTSLTQKKVLRAPCGAP 36
>AL359091-18|CAI13501.1| 141|Homo sapiens outer dense fiber of
sperm tails 2 protein.
Length = 141
Score = 29.1 bits (62), Expect = 7.2
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +2
Query: 17 SSSGAHCPRAIQCGVTENVSLQDKRCRRSVCGAP 118
SSSG PR CG SL K+ R+ CGAP
Sbjct: 4 SSSGGS-PRFPSCGKNGVTSLTQKKVLRAPCGAP 36
>AL359091-17|CAI13500.1| 638|Homo sapiens outer dense fiber of
sperm tails 2 protein.
Length = 638
Score = 29.1 bits (62), Expect = 7.2
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +2
Query: 17 SSSGAHCPRAIQCGVTENVSLQDKRCRRSVCGAP 118
SSSG PR CG SL K+ R+ CGAP
Sbjct: 4 SSSGGS-PRFPSCGKNGVTSLTQKKVLRAPCGAP 36
>AF012549-1|AAB66337.1| 638|Homo sapiens outer dense fiber protein
2 protein.
Length = 638
Score = 29.1 bits (62), Expect = 7.2
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +2
Query: 17 SSSGAHCPRAIQCGVTENVSLQDKRCRRSVCGAP 118
SSSG PR CG SL K+ R+ CGAP
Sbjct: 4 SSSGGS-PRFPSCGKNGVTSLTQKKVLRAPCGAP 36
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,079,438
Number of Sequences: 237096
Number of extensions: 1168044
Number of successful extensions: 2601
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2578
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2601
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3659526016
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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