Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_I18
(263 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17034| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.45
SB_59025| Best HMM Match : Antimicrobial_5 (HMM E-Value=5.1) 27 3.2
SB_52979| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 4.2
SB_21308| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 4.2
SB_16338| Best HMM Match : PHD (HMM E-Value=3.8e-08) 26 4.2
SB_59278| Best HMM Match : Helicase_C (HMM E-Value=0.00034) 26 5.5
SB_22631| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.5
SB_18816| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.5
SB_56113| Best HMM Match : zf-CCHC (HMM E-Value=0.0026) 25 7.3
SB_36658| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 7.3
SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026) 25 7.3
SB_35601| Best HMM Match : PKD_channel (HMM E-Value=0) 25 7.3
SB_21048| Best HMM Match : zf-CCHC (HMM E-Value=0.0026) 25 7.3
SB_3469| Best HMM Match : zf-CCHC (HMM E-Value=0.0026) 25 7.3
SB_55349| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 7.3
SB_44945| Best HMM Match : zf-CCHC (HMM E-Value=0.0026) 25 7.3
SB_36934| Best HMM Match : zf-CCHC (HMM E-Value=0.0026) 25 7.3
SB_36218| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 7.3
SB_31429| Best HMM Match : Tetraspannin (HMM E-Value=5.9e-35) 25 7.3
SB_30749| Best HMM Match : FARP (HMM E-Value=0.032) 25 7.3
SB_23879| Best HMM Match : rve (HMM E-Value=2.2e-17) 25 7.3
SB_21695| Best HMM Match : RVT_1 (HMM E-Value=0.00068) 25 7.3
SB_15412| Best HMM Match : zf-CCHC (HMM E-Value=0.22) 25 7.3
SB_12630| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 7.3
SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16) 25 7.3
SB_43060| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.6
SB_55679| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.6
>SB_17034| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 29.5 bits (63), Expect = 0.45
Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -2
Query: 235 LPAKGTLTPA-PEVPSELSVRAPCASLRTLELVNSSGSS 122
L AKG L+ P E +RAPC+SL E SSG S
Sbjct: 13 LEAKGRLSERRPSAKCESILRAPCSSLEDKESDESSGLS 51
>SB_59025| Best HMM Match : Antimicrobial_5 (HMM E-Value=5.1)
Length = 216
Score = 26.6 bits (56), Expect = 3.2
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = -3
Query: 147 SLSIVQAPHSVEYSKQVR*QSGIGFERRRTERQAIKRRSSRTCL 16
S ++ P ++++S+ R Q IG++ R + I+ R + CL
Sbjct: 107 SYALPTTPATLKHSEAKRRQGKIGYQASRDAKTGIRDRQLQECL 150
>SB_52979| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 416
Score = 26.2 bits (55), Expect = 4.2
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 42 LLLVALCVGVQSRYLIVSEPVYYIQHYEE 128
+LL+AL + YL+V VY+I Y E
Sbjct: 340 VLLIALLFASYTTYLVVMPTVYFIFGYNE 368
>SB_21308| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2641
Score = 26.2 bits (55), Expect = 4.2
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +1
Query: 37 SFYC-LSLCASAFKADT*LSANLFTIFNTMRSLNY*QALESAGTRTELSRS 186
+FYC L+ A+ +KA T + +N + +F+ S L SAG RS
Sbjct: 1034 TFYCALATKATVYKAKTPIESNTWYLFSVTWSTAKGLVLFSAGKEVYADRS 1084
>SB_16338| Best HMM Match : PHD (HMM E-Value=3.8e-08)
Length = 652
Score = 26.2 bits (55), Expect = 4.2
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +2
Query: 56 SVRRRSKPIPDCQRTCLLYSTL*GA*TIDKL*SPQGRARSSHAQLRW 196
S+R R K C R+ +LY+ G K RS HA LRW
Sbjct: 559 SLRTRGKVYSSCVRSAMLYA---GECWAPKSSDLARLQRSEHAMLRW 602
>SB_59278| Best HMM Match : Helicase_C (HMM E-Value=0.00034)
Length = 144
Score = 25.8 bits (54), Expect = 5.5
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +2
Query: 194 WYLWCWS*STLCW 232
WYLW W + LC+
Sbjct: 29 WYLWSWKDNMLCY 41
>SB_22631| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 173
Score = 25.8 bits (54), Expect = 5.5
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 39 FLLLVALCVGVQSRYLIVSEPVYYIQHYE 125
F++L A +GV Y V+EP+Y HYE
Sbjct: 115 FMMLFAAGIGVGLFYFGVAEPIY---HYE 140
>SB_18816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 506
Score = 25.8 bits (54), Expect = 5.5
Identities = 13/54 (24%), Positives = 27/54 (50%)
Frame = +3
Query: 45 LLVALCVGVQSRYLIVSEPVYYIQHYEEPELLTSSRVRRDAHGALTLNSDGTSG 206
LLV + G + + I+ Y++ H+++ ++ T +R + + T S SG
Sbjct: 6 LLVKIAFGAVTVFAILCVLCYHLNHHQKDDISTKFVMRTIGYSSSTWRSTEGSG 59
>SB_56113| Best HMM Match : zf-CCHC (HMM E-Value=0.0026)
Length = 1163
Score = 25.4 bits (53), Expect = 7.3
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +3
Query: 147 SRVRRDAHGALTLNSDGTSGAGVKVP 224
+R D HG T N G G GVK P
Sbjct: 176 NRKSSDQHGTGTCNYCGKQGHGVKAP 201
>SB_36658| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 698
Score = 25.4 bits (53), Expect = 7.3
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +3
Query: 147 SRVRRDAHGALTLNSDGTSGAGVKVP 224
+R D HG T N G G GVK P
Sbjct: 253 NRKSSDQHGTGTCNYCGKQGHGVKAP 278
>SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026)
Length = 779
Score = 25.4 bits (53), Expect = 7.3
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +3
Query: 147 SRVRRDAHGALTLNSDGTSGAGVKVP 224
+R D HG T N G G GVK P
Sbjct: 406 NRKSSDQHGTGTCNYCGKQGHGVKAP 431
>SB_35601| Best HMM Match : PKD_channel (HMM E-Value=0)
Length = 2497
Score = 25.4 bits (53), Expect = 7.3
Identities = 16/27 (59%), Positives = 17/27 (62%), Gaps = 4/27 (14%)
Frame = +3
Query: 105 YYI--QHYEEPELLTSSRVRRD--AHG 173
YYI H EE E SSRVRRD +HG
Sbjct: 1121 YYILMHHAEEGEQPESSRVRRDCGSHG 1147
>SB_21048| Best HMM Match : zf-CCHC (HMM E-Value=0.0026)
Length = 369
Score = 25.4 bits (53), Expect = 7.3
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +3
Query: 147 SRVRRDAHGALTLNSDGTSGAGVKVP 224
+R D HG T N G G GVK P
Sbjct: 256 NRKSSDQHGTGTCNYCGKQGHGVKAP 281
>SB_3469| Best HMM Match : zf-CCHC (HMM E-Value=0.0026)
Length = 369
Score = 25.4 bits (53), Expect = 7.3
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +3
Query: 147 SRVRRDAHGALTLNSDGTSGAGVKVP 224
+R D HG T N G G GVK P
Sbjct: 256 NRKSSDQHGTGTCNYCGKQGHGVKAP 281
>SB_55349| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 716
Score = 25.4 bits (53), Expect = 7.3
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +3
Query: 147 SRVRRDAHGALTLNSDGTSGAGVKVP 224
+R D HG T N G G GVK P
Sbjct: 256 NRKSSDQHGTGTCNYCGKQGHGVKAP 281
>SB_44945| Best HMM Match : zf-CCHC (HMM E-Value=0.0026)
Length = 361
Score = 25.4 bits (53), Expect = 7.3
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +3
Query: 147 SRVRRDAHGALTLNSDGTSGAGVKVP 224
+R D HG T N G G GVK P
Sbjct: 248 NRKSSDQHGTGTCNYCGKQGHGVKAP 273
>SB_36934| Best HMM Match : zf-CCHC (HMM E-Value=0.0026)
Length = 328
Score = 25.4 bits (53), Expect = 7.3
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +3
Query: 147 SRVRRDAHGALTLNSDGTSGAGVKVP 224
+R D HG T N G G GVK P
Sbjct: 186 NRKSSDQHGTGTCNYCGKQGHGVKAP 211
>SB_36218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 369
Score = 25.4 bits (53), Expect = 7.3
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +3
Query: 147 SRVRRDAHGALTLNSDGTSGAGVKVP 224
+R D HG T N G G GVK P
Sbjct: 256 NRKSSDQHGTGTCNYCGKQGHGVKAP 281
>SB_31429| Best HMM Match : Tetraspannin (HMM E-Value=5.9e-35)
Length = 286
Score = 25.4 bits (53), Expect = 7.3
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 56 SVRRRSKPIPDCQRTCLLYSTL 121
++R RS P PD TC+ Y+ L
Sbjct: 8 TLRLRSPPRPDAPSTCIKYTLL 29
>SB_30749| Best HMM Match : FARP (HMM E-Value=0.032)
Length = 2565
Score = 25.4 bits (53), Expect = 7.3
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -3
Query: 126 PHSVEYSKQVR*QSGIGFERRRTERQAIKRRSSR 25
PH + + K +S G RRR +RQA +RR R
Sbjct: 1623 PHVLRFGKP---KSRKGIRRRRRKRQARRRRRRR 1653
>SB_23879| Best HMM Match : rve (HMM E-Value=2.2e-17)
Length = 1273
Score = 25.4 bits (53), Expect = 7.3
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +3
Query: 147 SRVRRDAHGALTLNSDGTSGAGVKVP 224
+R D HG T N G G GVK P
Sbjct: 256 NRKSSDQHGTGTCNYCGKQGHGVKAP 281
>SB_21695| Best HMM Match : RVT_1 (HMM E-Value=0.00068)
Length = 1502
Score = 25.4 bits (53), Expect = 7.3
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +3
Query: 147 SRVRRDAHGALTLNSDGTSGAGVKVP 224
+R D HG T N G G GVK P
Sbjct: 237 NRKSSDQHGTGTCNYCGKQGHGVKAP 262
>SB_15412| Best HMM Match : zf-CCHC (HMM E-Value=0.22)
Length = 542
Score = 25.4 bits (53), Expect = 7.3
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +3
Query: 147 SRVRRDAHGALTLNSDGTSGAGVKVP 224
+R D HG T N G G GVK P
Sbjct: 497 NRKSSDQHGTGTCNYCGKQGHGVKAP 522
>SB_12630| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1018
Score = 25.4 bits (53), Expect = 7.3
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +3
Query: 147 SRVRRDAHGALTLNSDGTSGAGVKVP 224
+R D HG T N G G GVK P
Sbjct: 256 NRKSSDQHGTGTCNYCGKQGHGVKAP 281
>SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16)
Length = 842
Score = 25.4 bits (53), Expect = 7.3
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +3
Query: 147 SRVRRDAHGALTLNSDGTSGAGVKVP 224
+R D HG T N G G GVK P
Sbjct: 454 NRKSSDQHGTGTCNYCGKQGHGVKAP 479
>SB_43060| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 25.0 bits (52), Expect = 9.6
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +3
Query: 33 IVFLLLVALCVGVQSRYLIVSEPVYYIQHYEEP 131
IVF +++ C + R L + P Y + YE+P
Sbjct: 216 IVFRIVLNKCEALHVRTLKPAAPAYTLNAYEKP 248
>SB_55679| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 203
Score = 25.0 bits (52), Expect = 9.6
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +3
Query: 90 VSEPVYYIQHYEEPELLTSS 149
+S +YYIQ EP L TSS
Sbjct: 32 LSTTLYYIQSISEPPLTTSS 51
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,876,383
Number of Sequences: 59808
Number of extensions: 131269
Number of successful extensions: 424
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 423
length of database: 16,821,457
effective HSP length: 64
effective length of database: 12,993,745
effective search space used: 298856135
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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