Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_I18
         (263 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    22   1.1  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    22   1.1  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    22   1.5  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   1.5  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   1.5  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   2.6  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   2.6  
DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channe...    21   2.6  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   2.6  
AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.           21   3.4  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    20   5.9  
DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    19   7.8  
AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.           19   7.8  
AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.           19   7.8  

>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 22.2 bits (45), Expect = 1.1
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +3

Query: 54  ALCVGVQSRYLIVSEPVYYIQHYEEP 131
           A+CVGV +  +I   PV Y+  YE P
Sbjct: 501 AICVGVFTFNIIKFVPVKYLT-YEYP 525


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 22.2 bits (45), Expect = 1.1
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +3

Query: 54  ALCVGVQSRYLIVSEPVYYIQHYEEP 131
           A+CVGV +  +I   PV Y+  YE P
Sbjct: 554 AICVGVFTFNIIKFVPVKYLT-YEYP 578


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.8 bits (44), Expect = 1.5
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +3

Query: 48  LVALCVGVQSRYLIVSEPVYY 110
           +++LC     RYL V++P+ Y
Sbjct: 126 ILSLCAISIDRYLAVTQPLIY 146


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.8 bits (44), Expect = 1.5
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +3

Query: 48  LVALCVGVQSRYLIVSEPVYYIQH 119
           LVA+ +    RY+ V++P+ Y +H
Sbjct: 277 LVAISI---DRYIAVTQPIKYAKH 297


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 1.5
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +3

Query: 48  LVALCVGVQSRYLIVSEPVYYIQ 116
           ++ LC     RYL V+ PV Y Q
Sbjct: 153 ILNLCAISLDRYLAVTRPVSYPQ 175


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 2.6
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +3

Query: 48  LVALCVGVQSRYLIVSEPVYYIQ 116
           ++ LC     RY  +++P+ Y Q
Sbjct: 124 ILNLCAIALDRYWAITDPINYAQ 146


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 2.6
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +3

Query: 48  LVALCVGVQSRYLIVSEPVYYIQ 116
           ++ LC     RY  +++P+ Y Q
Sbjct: 124 ILNLCAIALDRYWAITDPINYAQ 146


>DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channel
           protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 2.6
 Identities = 15/46 (32%), Positives = 19/46 (41%)
 Frame = +3

Query: 108 YIQHYEEPELLTSSRVRRDAHGALTLNSDGTSGAGVKVPFAGNDKN 245
           Y+  Y + E L  S+        LTL+ D      V   F  NDKN
Sbjct: 87  YLNQYWKDERLAFSQEEE----VLTLSGDFAEKIWVPDTFFANDKN 128


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 2.6
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +3

Query: 48  LVALCVGVQSRYLIVSEPVYYIQ 116
           ++ LC     RY  +++P+ Y Q
Sbjct: 124 ILNLCAIALDRYWAITDPINYAQ 146


>AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.
          Length = 126

 Score = 20.6 bits (41), Expect = 3.4
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +3

Query: 111 IQHYEEPELLTSSRV 155
           +Q +EE ++LTSS V
Sbjct: 47  VQGFEEQDILTSSGV 61


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 19.8 bits (39), Expect = 5.9
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +3

Query: 15  TNMFGKIVFLLLVALCVG 68
           TN+ G IVF +   L  G
Sbjct: 238 TNVMGMIVFCITFGLVAG 255


>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 19.4 bits (38), Expect = 7.8
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = +1

Query: 184 STPMVPLVLELKYPLLVTTRI 246
           S+P    +L+ +YPL++ T++
Sbjct: 29  SSPRPKPLLKKEYPLVMDTKL 49


>AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 19.4 bits (38), Expect = 7.8
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -2

Query: 214 TPAPEVPSELSVRAPCASLRT 152
           TP  E+P+    +A CA + T
Sbjct: 71  TPLNELPANKRFQAHCAGVIT 91


>AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 19.4 bits (38), Expect = 7.8
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -2

Query: 214 TPAPEVPSELSVRAPCASLRT 152
           TP  E+P+    +A CA + T
Sbjct: 71  TPLNELPANKRFQAHCAGVIT 91


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,755
Number of Sequences: 438
Number of extensions: 1356
Number of successful extensions: 16
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  4887441
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)