Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_I15
         (509 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    24   0.91 
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       23   1.2  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    21   6.4  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   8.4  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   8.4  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   8.4  

>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 23.8 bits (49), Expect = 0.91
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -2

Query: 238 KNFSDSLNSNRRADID 191
           KNF+DS  SNR  +ID
Sbjct: 415 KNFNDSPESNRSNEID 430


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -1

Query: 359 RHLEPSLPTSTLQELGELYEQYCQ 288
           RH E +     ++ELG ++  YC+
Sbjct: 290 RHPESNPSERVMRELGRIFRAYCR 313


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -2

Query: 259 TIAFATTKNFSDSLNSNRRADIDVTQYSSTAYIKP 155
           T +  T  + SDS  S+   D ++   S+ +YIKP
Sbjct: 125 TASRETKSSESDSGASSADPDDELRSSSAFSYIKP 159


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -2

Query: 238 KNFSDSLNSNRRADIDVTQYSSTAY 164
           K  SDS N+N + + +  QY + A+
Sbjct: 456 KEESDSNNNNNKEEGNSCQYCNIAF 480


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 6/22 (27%), Positives = 15/22 (68%)
 Frame = -1

Query: 347 PSLPTSTLQELGELYEQYCQMI 282
           P+LP +++   G + ++ CQ++
Sbjct: 129 PTLPVTSIHLRGAIGQRSCQVV 150


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +3

Query: 132 NWLPMTLIGFMYAVL 176
           NW P  +IG M + L
Sbjct: 91  NWYPRLIIGIMNSTL 105


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,107
Number of Sequences: 336
Number of extensions: 2173
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12154132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)