Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_I10
         (606 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       24   1.1  
AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    22   3.5  
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    22   3.5  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    22   4.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.1  

>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 12/33 (36%), Positives = 13/33 (39%)
 Frame = +1

Query: 268 CSTGSTPGKDCHVTCNQLLTDDISVAATCAKKI 366
           C  G T GK CH   N    +      TC  KI
Sbjct: 56  CQPGFT-GKYCHENINDCKVNPCENGGTCVDKI 87


>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -2

Query: 107 NPHLVKRFASQCKASAKRASNITYFDIMFPS 15
           NP  ++R  +QC+ + +  S+ T   I   S
Sbjct: 84  NPRALRRLRTQCERAKRTLSSATQASIEIDS 114


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -2

Query: 107 NPHLVKRFASQCKASAKRASNITYFDIMFPS 15
           NP  ++R  +QC+ + +  S+ T   I   S
Sbjct: 84  NPRALRRLRTQCERAKRTLSSATQASIEIDS 114


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 10/41 (24%), Positives = 21/41 (51%)
 Frame = +1

Query: 460 NFIKQLLMKFTSSSCNFKTKMFIRILCIILMFKKRKSPETV 582
           NF+K  L+    +   F   +FI ++  +++ K R+   T+
Sbjct: 36  NFVKTYLVSDFENYVTFFCSLFIVVILKLILAKYRQQDVTL 76


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +1

Query: 232  DYGLFQINDKYWCSTGSTPGK 294
            DY     +  YW   G+ PGK
Sbjct: 2538 DYFNANFSLNYWIEKGADPGK 2558


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,343
Number of Sequences: 336
Number of extensions: 2907
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15352827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)