Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_I10
         (606 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41547-6|AAA83197.1|  139|Caenorhabditis elegans Hypothetical pr...    31   0.84 
AF067611-3|AAC19179.1|  139|Caenorhabditis elegans Hypothetical ...    31   0.84 
AF067611-4|AAC19181.1|  139|Caenorhabditis elegans Hypothetical ...    29   1.9  
U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z71178-6|CAA94880.2| 1185|Caenorhabditis elegans Hypothetical pr...    28   5.9  
AC024753-6|AAF60458.2|  407|Caenorhabditis elegans Hypothetical ...    27   7.9  

>U41547-6|AAA83197.1|  139|Caenorhabditis elegans Hypothetical
           protein F22A3.6a protein.
          Length = 139

 Score = 30.7 bits (66), Expect = 0.84
 Identities = 23/75 (30%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
 Frame = +1

Query: 163 CLVENESGRFTDKIGKVNKNGSRDYGLFQINDKYWCSTGSTPGKDCHVT--CNQLLTDDI 336
           C+   ESG     IG     GS   G +QI   Y+   G    K    T    +   DD+
Sbjct: 23  CICMRESG--CKPIGCHMDVGSLSCGYYQIKIGYYEDCGQPTKKAGETTEAAWKRCADDL 80

Query: 337 SVAATCAKKIYKRHK 381
           + A TC +  Y R+K
Sbjct: 81  NCATTCVENYYNRYK 95


>AF067611-3|AAC19179.1|  139|Caenorhabditis elegans Hypothetical
           protein C45G7.3 protein.
          Length = 139

 Score = 30.7 bits (66), Expect = 0.84
 Identities = 23/75 (30%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
 Frame = +1

Query: 163 CLVENESGRFTDKIGKVNKNGSRDYGLFQINDKYWCSTGSTPGKDCHVT--CNQLLTDDI 336
           C+   ESG     IG     GS   G +QI   Y+   G    K    T    +   +D+
Sbjct: 23  CICMRESG--CKPIGCNMDVGSLSCGYYQIKLPYYEDCGQPTKKSGETTEAAWKRCANDL 80

Query: 337 SVAATCAKKIYKRHK 381
           S A TC +  Y R+K
Sbjct: 81  SCATTCVENYYNRYK 95


>AF067611-4|AAC19181.1|  139|Caenorhabditis elegans Hypothetical
           protein C45G7.2 protein.
          Length = 139

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 4/79 (5%)
 Frame = +1

Query: 163 CLVENESGRFTDKIGKVNKNGSRDYGLFQINDKYWCSTGSTPGKDCHVTCNQLL----TD 330
           C+   ESG     IG     GS   G +QI   Y+   G  PGK  H    ++      D
Sbjct: 23  CICMRESG--CKPIGCHMDVGSLSCGYYQIKIPYYEDCGQ-PGKK-HGESTEVAWKRCAD 78

Query: 331 DISVAATCAKKIYKRHKFD 387
           D+  A  C +  Y R+K +
Sbjct: 79  DLKCATNCVENYYNRYKHE 97


>U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical protein
            W02C12.1 protein.
          Length = 1372

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +1

Query: 208  KVNKNGSRDYGLFQINDKYWCSTGSTPGKDCHVTC 312
            KV  NG  D G  +I ++Y C  G    +D  V C
Sbjct: 902  KVLPNGRPDVGSLKIKEEYLCQAGQVVVRDLCVPC 936


>Z71178-6|CAA94880.2| 1185|Caenorhabditis elegans Hypothetical
           protein B0024.8 protein.
          Length = 1185

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +1

Query: 106 LVQELRRQGFDESLMSNWVCLVEN 177
           L+ EL      E + SNW CLVEN
Sbjct: 159 LITELHHILIPELVKSNWTCLVEN 182


>AC024753-6|AAF60458.2|  407|Caenorhabditis elegans Hypothetical
           protein Y23H5B.4 protein.
          Length = 407

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 12/36 (33%), Positives = 24/36 (66%)
 Frame = +1

Query: 448 EKALNFIKQLLMKFTSSSCNFKTKMFIRILCIILMF 555
           ++A ++ +QLL+ FT+S   F   +++  LC+I +F
Sbjct: 12  QEARDYFRQLLLPFTASFTMFHNYIYV-FLCVIGVF 46


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,781,076
Number of Sequences: 27780
Number of extensions: 277322
Number of successful extensions: 669
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 669
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)