Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_I09
         (522 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_19976| Best HMM Match : PGI (HMM E-Value=0)                        104   5e-23
SB_37337| Best HMM Match : PGI (HMM E-Value=0)                         67   9e-12
SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.0  
SB_56816| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   1.8  
SB_42673| Best HMM Match : CARDB (HMM E-Value=5.6e-08)                 29   2.3  
SB_6681| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   4.1  
SB_16008| Best HMM Match : Orn_Arg_deC_N (HMM E-Value=6.6e-09)         28   4.1  
SB_35857| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.1  
SB_59149| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.4  
SB_51570| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.4  
SB_29668| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.4  
SB_5468| Best HMM Match : PAN (HMM E-Value=0.0022)                     27   9.4  
SB_59711| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.4  

>SB_19976| Best HMM Match : PGI (HMM E-Value=0)
          Length = 664

 Score =  104 bits (249), Expect = 5e-23
 Identities = 46/71 (64%), Positives = 54/71 (76%)
 Frame = +3

Query: 129 LLNGANYMDEHFTTAPFERNAPVILALLGVWYHNFYGAETHALLPYDQYLHRYAAYFQQG 308
           LL GAN MD+HF  APFE N PVILA+L +WY+NF+ AET AL+PY QYL + A Y QQG
Sbjct: 265 LLKGANEMDKHFREAPFEENIPVILAMLSIWYNNFFKAETEALIPYTQYLQKLAPYLQQG 324

Query: 309 DMESNGKYVTR 341
            MESNGK + R
Sbjct: 325 IMESNGKSIGR 335


>SB_37337| Best HMM Match : PGI (HMM E-Value=0)
          Length = 391

 Score = 66.9 bits (156), Expect = 9e-12
 Identities = 35/90 (38%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
 Frame = +3

Query: 153 DEHFTTAPFERNAPVILALLGVWYHNFYGAETHALLPYDQYLHRYAAYFQQGD---MESN 323
           D HF  AP E N PVILALLG+WY+NF+GA++H +  YDQ+          G    +   
Sbjct: 213 DNHFKDAPLENNIPVILALLGIWYNNFFGAQSHGMFAYDQWGEMVYDLLDDGVDILVVLE 272

Query: 324 GKYVTRAGDEVPYS-TGPIVWGEPGTNGQH 410
           GK+       +P     PI    P +NG H
Sbjct: 273 GKWFLTRTKMIPADFLAPIETHNPISNGLH 302



 Score = 41.5 bits (93), Expect = 4e-04
 Identities = 17/28 (60%), Positives = 22/28 (78%)
 Frame = +3

Query: 438 TRLIPCDFIARAQTHNPISGGEHPRILL 521
           T++IP DF+A  +THNPIS G H +ILL
Sbjct: 280 TKMIPADFLAPIETHNPISNGLHHQILL 307


>SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1325

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 15/42 (35%), Positives = 26/42 (61%)
 Frame = +1

Query: 190 LQLF*LSLGCGITIFMALKLMLCYHMTSIYIDTPRTSNKAIW 315
           ++LF   L  G+++ +AL     +++TS+Y  TPRT   +IW
Sbjct: 710 IKLFLTLLVLGLSVLLAL-----WYITSVYGSTPRTGRVSIW 746


>SB_56816| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1200

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +3

Query: 222 YHNFYGAETHALLPYDQYLHRYAAYFQQ 305
           YH F  + +   L YDQ+ HR   YF Q
Sbjct: 52  YHIFISSSSCRSLRYDQHTHRQLTYFDQ 79


>SB_42673| Best HMM Match : CARDB (HMM E-Value=5.6e-08)
          Length = 1433

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 18/56 (32%), Positives = 28/56 (50%)
 Frame = +3

Query: 216 VWYHNFYGAETHALLPYDQYLHRYAAYFQQGDMESNGKYVTRAGDEVPYSTGPIVW 383
           V+ +N  GAE+H ++       R A     G +  +G+Y   A  EVPY+ G  V+
Sbjct: 794 VYIYNTPGAESHDVIGSGT---RLAQVTHTGGLAVDGQYRVTADIEVPYTAGSPVY 846


>SB_6681| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 113

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
 Frame = -3

Query: 496 PDIGLWVCARAMKSQGINLVPGWIS**KACWPLVPGSPHTMGPVEYGTSSPALVTYFPLL 317
           PD G++        Q +N   G+I         VP S HT+  +  G  S   V YF   
Sbjct: 28  PDQGVFKQLVTEFGQSLNAKTGFIVSRVEYTKKVPESDHTIALIHAGAVSIEFVLYFSSF 87

Query: 316 SISPC-WKYAAY 284
           +++   WK+ A+
Sbjct: 88  ALNDTPWKHPAF 99


>SB_16008| Best HMM Match : Orn_Arg_deC_N (HMM E-Value=6.6e-09)
          Length = 314

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
 Frame = -3

Query: 496 PDIGLWVCARAMKSQGINLVPGWIS**KACWPLVPGSPHTMGPVEYGTSSPALVTYFPLL 317
           PD G++        Q +N   G+I         VP S HT+  +  G  S   V YF   
Sbjct: 229 PDQGVFKQLVTEFGQSLNAKTGFIVSRVEYTKKVPESDHTIALIHAGAVSIEFVLYFSSF 288

Query: 316 SISPC-WKYAAY 284
           +++   WK+ A+
Sbjct: 289 ALNDTPWKHPAF 300


>SB_35857| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2680

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
 Frame = +3

Query: 255  LLPYDQYLHRYAAYFQQGDMESNGKYVT---RAGDEVPYST 368
            L PY  Y  + AAY Q G  E  G  VT    A +EVP  T
Sbjct: 1843 LTPYTTYRVQVAAYTQGGSAEGPGLSVTTLQAAPEEVPTPT 1883


>SB_59149| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 642

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = -3

Query: 370 PVEYGTSSPALVTYFPLLSISPCWKYAAYLCKYWSYGNR 254
           PV++  ++P  + Y    S S  W Y   L + WS G++
Sbjct: 392 PVKW--TAPEAINYGRYSSASDVWSYGVLLFEIWSLGDK 428


>SB_51570| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1950

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 22/60 (36%), Positives = 26/60 (43%), Gaps = 7/60 (11%)
 Frame = +3

Query: 264 YDQYLHRYAAYFQQ------GDMESN-GKYVTRAGDEVPYSTGPIVWGEPGTNGQHAFYQ 422
           YD   H YAAY  Q      G+M +N G++   A D   YST P     P T   H   Q
Sbjct: 746 YDGEEHPYAAYGMQIYKDPKGEMHNNLGRFFV-ATDREEYSTDPAESKTPQTTSFHKIGQ 804


>SB_29668| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 253

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = +2

Query: 443 VDSLRFHCARANPQSDIRR 499
           VD+LR HC RAN Q+ I R
Sbjct: 164 VDTLRMHCYRANYQTAIWR 182


>SB_5468| Best HMM Match : PAN (HMM E-Value=0.0022)
          Length = 238

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -1

Query: 369 PSSTGPRLQLWSHISRYFPYRL 304
           PSS   R  LW+ ISR  P+R+
Sbjct: 180 PSSVTVRFLLWASISRLIPHRM 201


>SB_59711| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 226

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = -2

Query: 476 LRARNEIARNQPSSWMD*LIESVLAVSSRLAPYY 375
           LR  ++IAR+QP SW D      L ++S  A +Y
Sbjct: 195 LRVYHQIARHQPHSWCD---RKTLTLASCTANWY 225


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,891,416
Number of Sequences: 59808
Number of extensions: 318785
Number of successful extensions: 760
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 760
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)