Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_I09
         (522 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL110500-9|CAE54920.1|  586|Caenorhabditis elegans Hypothetical ...   222   1e-58
AL110500-8|CAB60430.1|  551|Caenorhabditis elegans Hypothetical ...   222   1e-58
U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical pr...    33   0.16 
AL117195-8|CAB55030.1|  258|Caenorhabditis elegans Hypothetical ...    27   6.2  
AL031633-22|CAB97238.1|  512|Caenorhabditis elegans Hypothetical...    27   6.2  
AJ582072-1|CAE46542.1|  512|Caenorhabditis elegans flavin monoox...    27   6.2  

>AL110500-9|CAE54920.1|  586|Caenorhabditis elegans Hypothetical
           protein Y87G2A.8b protein.
          Length = 586

 Score =  222 bits (543), Expect = 1e-58
 Identities = 100/133 (75%), Positives = 111/133 (83%)
 Frame = +3

Query: 123 ENLLNGANYMDEHFTTAPFERNAPVILALLGVWYHNFYGAETHALLPYDQYLHRYAAYFQ 302
           E LL+GA  +DEHF   P E+N PVILA++GV Y+N YGAETHALLPYDQY+HR+AAYFQ
Sbjct: 327 EKLLDGAFSVDEHFVNTPLEKNIPVILAMIGVLYNNIYGAETHALLPYDQYMHRFAAYFQ 386

Query: 303 QGDMESNGKYVTRAGDEVPYSTGPIVWGEPGTNGQHAFYQLIHPGTRLIPCDFIARAQTH 482
           QGDMESNGK+VTR G  V YSTGPIVWGEPGTNGQHAFYQLIH GTRLIP DFIA  +T 
Sbjct: 387 QGDMESNGKFVTRHGQRVDYSTGPIVWGEPGTNGQHAFYQLIHQGTRLIPADFIAPVKTL 446

Query: 483 NPISGGEHPRILL 521
           NPI GG H +ILL
Sbjct: 447 NPIRGGLHHQILL 459


>AL110500-8|CAB60430.1|  551|Caenorhabditis elegans Hypothetical
           protein Y87G2A.8a protein.
          Length = 551

 Score =  222 bits (543), Expect = 1e-58
 Identities = 100/133 (75%), Positives = 111/133 (83%)
 Frame = +3

Query: 123 ENLLNGANYMDEHFTTAPFERNAPVILALLGVWYHNFYGAETHALLPYDQYLHRYAAYFQ 302
           E LL+GA  +DEHF   P E+N PVILA++GV Y+N YGAETHALLPYDQY+HR+AAYFQ
Sbjct: 292 EKLLDGAFSVDEHFVNTPLEKNIPVILAMIGVLYNNIYGAETHALLPYDQYMHRFAAYFQ 351

Query: 303 QGDMESNGKYVTRAGDEVPYSTGPIVWGEPGTNGQHAFYQLIHPGTRLIPCDFIARAQTH 482
           QGDMESNGK+VTR G  V YSTGPIVWGEPGTNGQHAFYQLIH GTRLIP DFIA  +T 
Sbjct: 352 QGDMESNGKFVTRHGQRVDYSTGPIVWGEPGTNGQHAFYQLIHQGTRLIPADFIAPVKTL 411

Query: 483 NPISGGEHPRILL 521
           NPI GG H +ILL
Sbjct: 412 NPIRGGLHHQILL 424


>U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical
           protein F40H6.5 protein.
          Length = 1288

 Score = 32.7 bits (71), Expect = 0.16
 Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
 Frame = +3

Query: 144 NYMDEHFTTAPFERNAPVILALL-GVWYHNFYG 239
           NY  E ++T PF R  P +L+++ G+ Y++ YG
Sbjct: 834 NYQFESYSTRPFSRGLPYVLSVVRGINYYDVYG 866


>AL117195-8|CAB55030.1|  258|Caenorhabditis elegans Hypothetical
           protein Y57A10A.10 protein.
          Length = 258

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +3

Query: 141 ANYMDEHFTTAPFERNAPVILALLGVWYHNFY 236
           AN++      APF+R+  +ILA + +WY  FY
Sbjct: 39  ANFLLGEPVIAPFKRHDDIILATI-IWYLVFY 69


>AL031633-22|CAB97238.1|  512|Caenorhabditis elegans Hypothetical
           protein Y39A1A.19 protein.
          Length = 512

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 20/71 (28%), Positives = 30/71 (42%)
 Frame = +3

Query: 222 YHNFYGAETHALLPYDQYLHRYAAYFQQGDMESNGKYVTRAGDEVPYSTGPIVWGEPGTN 401
           Y N Y A+ H LL Y ++ +   +  +  D +  GK+  R  DE       I  G    +
Sbjct: 93  YLNNY-AKHHELLKYIKFNNSVISIDRNDDYDVTGKWKVRYSDETGAEKTRIFDGVMLCS 151

Query: 402 GQHAFYQLIHP 434
           G HA   +  P
Sbjct: 152 GHHAIPHIPKP 162


>AJ582072-1|CAE46542.1|  512|Caenorhabditis elegans flavin
           monooxygenase protein.
          Length = 512

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 20/71 (28%), Positives = 30/71 (42%)
 Frame = +3

Query: 222 YHNFYGAETHALLPYDQYLHRYAAYFQQGDMESNGKYVTRAGDEVPYSTGPIVWGEPGTN 401
           Y N Y A+ H LL Y ++ +   +  +  D +  GK+  R  DE       I  G    +
Sbjct: 93  YLNNY-AKHHELLKYIKFNNSVISIDRNDDYDVTGKWKVRYSDETGAEKTRIFDGVMLCS 151

Query: 402 GQHAFYQLIHP 434
           G HA   +  P
Sbjct: 152 GHHAIPHIPKP 162


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,792,677
Number of Sequences: 27780
Number of extensions: 228481
Number of successful extensions: 569
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 548
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 569
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)