Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_I07
(568 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011096-1|AAR82762.1| 464|Drosophila melanogaster RE30726p pro... 83 3e-16
AE014134-1857|AAS64675.1| 458|Drosophila melanogaster CG33303-P... 83 3e-16
BT001395-1|AAN71150.1| 371|Drosophila melanogaster GH05770p pro... 49 4e-06
AE014296-1684|AAZ66069.1| 189|Drosophila melanogaster CG33700-P... 32 0.47
DQ398892-1|ABD61608.1| 2043|Drosophila melanogaster Dicer-1 prot... 31 1.1
DQ398891-1|ABD61607.1| 2043|Drosophila melanogaster Dicer-1 prot... 31 1.1
DQ398890-1|ABD61606.1| 2043|Drosophila melanogaster Dicer-1 prot... 31 1.1
DQ398889-1|ABD61605.1| 2043|Drosophila melanogaster Dicer-1 prot... 31 1.1
DQ398888-1|ABD61604.1| 2043|Drosophila melanogaster Dicer-1 prot... 31 1.1
DQ398887-1|ABD61603.1| 2043|Drosophila melanogaster Dicer-1 prot... 31 1.1
DQ398886-1|ABD61602.1| 2043|Drosophila melanogaster Dicer-1 prot... 31 1.1
DQ398885-1|ABD61601.1| 2043|Drosophila melanogaster Dicer-1 prot... 31 1.1
AE014297-3226|AAF56056.1| 2249|Drosophila melanogaster CG4792-PA... 31 1.1
BT030125-1|ABN49264.1| 1429|Drosophila melanogaster IP14232p pro... 28 7.7
AE014297-1348|ABI31163.1| 1137|Drosophila melanogaster CG14713-P... 28 7.7
>BT011096-1|AAR82762.1| 464|Drosophila melanogaster RE30726p
protein.
Length = 464
Score = 83.0 bits (196), Expect = 3e-16
Identities = 53/156 (33%), Positives = 86/156 (55%), Gaps = 1/156 (0%)
Frame = +3
Query: 27 FVLYVTIYCNSASIDTISSDIQFKNVDRTIDISSQLVKITSKITFENTGKSTIKNFLIAV 206
FV+Y+ + + T + +I NV+RT+D++SQLVK T+KI+ E++ I ++
Sbjct: 20 FVIYLALGA-LLCLATANGEIVNTNVERTLDLTSQLVKTTTKISAEDSAGKPIVEYVFF- 77
Query: 207 EDSAKENLAFITAKDSSNKDLRLTETT-VKGYDYVKFWRVELKDAVNAGSTTAVTVDTVF 383
+++ +LA+I KD+S+K + VKG F A + V+TV
Sbjct: 78 --TSEPSLAYIDVKDASDKSVPFKRNEPVKGEQSFTF------TFPRAAAKQTFIVETVA 129
Query: 384 TKALQPYPTEITQQEDQLVKYIGNLYVYSPYYVISQ 491
+K ++P+P EI Q + Q VKY GNL++YS Y SQ
Sbjct: 130 SKGIRPHPEEIRQNDKQFVKYTGNLHLYSKYRTNSQ 165
>AE014134-1857|AAS64675.1| 458|Drosophila melanogaster CG33303-PA
protein.
Length = 458
Score = 83.0 bits (196), Expect = 3e-16
Identities = 53/156 (33%), Positives = 86/156 (55%), Gaps = 1/156 (0%)
Frame = +3
Query: 27 FVLYVTIYCNSASIDTISSDIQFKNVDRTIDISSQLVKITSKITFENTGKSTIKNFLIAV 206
FV+Y+ + + T + +I NV+RT+D++SQLVK T+KI+ E++ I ++
Sbjct: 14 FVIYLALGA-LLCLATANGEIVNTNVERTLDLTSQLVKTTTKISAEDSAGKPIVEYVFF- 71
Query: 207 EDSAKENLAFITAKDSSNKDLRLTETT-VKGYDYVKFWRVELKDAVNAGSTTAVTVDTVF 383
+++ +LA+I KD+S+K + VKG F A + V+TV
Sbjct: 72 --TSEPSLAYIDVKDASDKSVPFKRNEPVKGEQSFTF------TFPRAAAKQTFIVETVA 123
Query: 384 TKALQPYPTEITQQEDQLVKYIGNLYVYSPYYVISQ 491
+K ++P+P EI Q + Q VKY GNL++YS Y SQ
Sbjct: 124 SKGIRPHPEEIRQNDKQFVKYTGNLHLYSKYRTNSQ 159
>BT001395-1|AAN71150.1| 371|Drosophila melanogaster GH05770p
protein.
Length = 371
Score = 49.2 bits (112), Expect = 4e-06
Identities = 22/49 (44%), Positives = 31/49 (63%)
Frame = +3
Query: 345 AGSTTAVTVDTVFTKALQPYPTEITQQEDQLVKYIGNLYVYSPYYVISQ 491
A + V+TV +K ++P+P EI Q + Q VKY GNL++YS Y SQ
Sbjct: 24 AAAKQTFIVETVASKGIRPHPEEIRQNDKQFVKYTGNLHLYSKYRTNSQ 72
>AE014296-1684|AAZ66069.1| 189|Drosophila melanogaster CG33700-PA
protein.
Length = 189
Score = 32.3 bits (70), Expect = 0.47
Identities = 16/74 (21%), Positives = 33/74 (44%)
Frame = -3
Query: 263 FVAAIFSCDEC*ILLCRVFYRDQEILYC*FPCVLKGYFRCNFHKLRRNIYRSVYIFKLYI 84
F+A + C +++C ++ Q ++ F + + RC +RR + ++KLY
Sbjct: 18 FIAKVLPVMSCGVVMCAGDFQLQNVICESFDNAITNFSRCEMKFIRRGVAAFYMVWKLYN 77
Query: 83 ARYSVNTSTVAIYR 42
VA+Y+
Sbjct: 78 VPIKSVDINVALYK 91
>DQ398892-1|ABD61608.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = -3
Query: 440 HELIFLLSYLCRIRLQSLCENGINRH-GGRRPGVYSILQFNTPKF-HIIVTFHC 285
H L++ L I+L SLCE+ +RH G +I ++++PK ++ T C
Sbjct: 264 HYLLYCLVSTALIQLYSLCEHAFHRHLGSGSDSRQTIERYSSPKVRRLLQTLRC 317
>DQ398891-1|ABD61607.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = -3
Query: 440 HELIFLLSYLCRIRLQSLCENGINRH-GGRRPGVYSILQFNTPKF-HIIVTFHC 285
H L++ L I+L SLCE+ +RH G +I ++++PK ++ T C
Sbjct: 264 HYLLYCLVSTALIQLYSLCEHAFHRHLGSGSDSRQTIERYSSPKVRRLLQTLRC 317
>DQ398890-1|ABD61606.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = -3
Query: 440 HELIFLLSYLCRIRLQSLCENGINRH-GGRRPGVYSILQFNTPKF-HIIVTFHC 285
H L++ L I+L SLCE+ +RH G +I ++++PK ++ T C
Sbjct: 264 HYLLYCLVSTALIQLYSLCEHAFHRHLGSGSDSRQTIERYSSPKVRRLLQTLRC 317
>DQ398889-1|ABD61605.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = -3
Query: 440 HELIFLLSYLCRIRLQSLCENGINRH-GGRRPGVYSILQFNTPKF-HIIVTFHC 285
H L++ L I+L SLCE+ +RH G +I ++++PK ++ T C
Sbjct: 264 HYLLYCLVSTALIQLYSLCEHAFHRHLGSGSDSRQTIERYSSPKVRRLLQTLRC 317
>DQ398888-1|ABD61604.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = -3
Query: 440 HELIFLLSYLCRIRLQSLCENGINRH-GGRRPGVYSILQFNTPKF-HIIVTFHC 285
H L++ L I+L SLCE+ +RH G +I ++++PK ++ T C
Sbjct: 264 HYLLYCLVSTALIQLYSLCEHAFHRHLGSGSDSRQTIERYSSPKVRRLLQTLRC 317
>DQ398887-1|ABD61603.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = -3
Query: 440 HELIFLLSYLCRIRLQSLCENGINRH-GGRRPGVYSILQFNTPKF-HIIVTFHC 285
H L++ L I+L SLCE+ +RH G +I ++++PK ++ T C
Sbjct: 264 HYLLYCLVSTALIQLYSLCEHAFHRHLGSGSDSRQTIERYSSPKVRRLLQTLRC 317
>DQ398886-1|ABD61602.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = -3
Query: 440 HELIFLLSYLCRIRLQSLCENGINRH-GGRRPGVYSILQFNTPKF-HIIVTFHC 285
H L++ L I+L SLCE+ +RH G +I ++++PK ++ T C
Sbjct: 264 HYLLYCLVSTALIQLYSLCEHAFHRHLGSGSDSRQTIERYSSPKVRRLLQTLRC 317
>DQ398885-1|ABD61601.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = -3
Query: 440 HELIFLLSYLCRIRLQSLCENGINRH-GGRRPGVYSILQFNTPKF-HIIVTFHC 285
H L++ L I+L SLCE+ +RH G +I ++++PK ++ T C
Sbjct: 264 HYLLYCLVSTALIQLYSLCEHAFHRHLGSGSDSRQTIERYSSPKVRRLLQTLRC 317
>AE014297-3226|AAF56056.1| 2249|Drosophila melanogaster CG4792-PA
protein.
Length = 2249
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = -3
Query: 440 HELIFLLSYLCRIRLQSLCENGINRH-GGRRPGVYSILQFNTPKF-HIIVTFHC 285
H L++ L I+L SLCE+ +RH G +I ++++PK ++ T C
Sbjct: 321 HYLLYCLVSTALIQLYSLCEHAFHRHLGSGSDSRQTIERYSSPKVRRLLQTLRC 374
>BT030125-1|ABN49264.1| 1429|Drosophila melanogaster IP14232p
protein.
Length = 1429
Score = 28.3 bits (60), Expect = 7.7
Identities = 25/76 (32%), Positives = 32/76 (42%), Gaps = 4/76 (5%)
Frame = +3
Query: 213 SAKENLAF--ITAKDSSNKDLRLTETTVKG--YDYVKFWRVELKDAVNAGSTTAVTVDTV 380
S KENL TA N+ TE+ + G D VK ELKD + T T
Sbjct: 93 SPKENLNVKQTTAAFEKNESSNTTESHLNGAQVDPVK----ELKDTETSADTVKEESSTT 148
Query: 381 FTKALQPYPTEITQQE 428
T L PT +T ++
Sbjct: 149 TTSQLDQNPTNVTDKK 164
>AE014297-1348|ABI31163.1| 1137|Drosophila melanogaster CG14713-PB
protein.
Length = 1137
Score = 28.3 bits (60), Expect = 7.7
Identities = 25/76 (32%), Positives = 32/76 (42%), Gaps = 4/76 (5%)
Frame = +3
Query: 213 SAKENLAF--ITAKDSSNKDLRLTETTVKG--YDYVKFWRVELKDAVNAGSTTAVTVDTV 380
S KENL TA N+ TE+ + G D VK ELKD + T T
Sbjct: 93 SPKENLNVKQTTAAFEKNESSNTTESHLNGAQVDPVK----ELKDTETSADTVKEESSTT 148
Query: 381 FTKALQPYPTEITQQE 428
T L PT +T ++
Sbjct: 149 TTSQLDQNPTNVTDKK 164
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,577,116
Number of Sequences: 53049
Number of extensions: 393098
Number of successful extensions: 1048
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1046
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2213979693
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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