Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_I06
(632 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z98172-1|CAI19895.1| 293|Homo sapiens nuclear undecaprenyl pyro... 50 5e-06
BC110325-1|AAI10326.1| 293|Homo sapiens nuclear undecaprenyl py... 50 5e-06
BC066910-1|AAH66910.1| 293|Homo sapiens nuclear undecaprenyl py... 50 5e-06
BC063794-1|AAH63794.1| 293|Homo sapiens nuclear undecaprenyl py... 50 5e-06
BC013026-1|AAH13026.1| 293|Homo sapiens nuclear undecaprenyl py... 50 5e-06
AL590303-1|CAH71370.1| 293|Homo sapiens nuclear undecaprenyl py... 50 5e-06
AL031731-12|CAI20220.1| 176|Homo sapiens MAD2 mitotic arrest de... 35 0.28
BX537404-1|CAD97646.1| 875|Homo sapiens hypothetical protein pr... 30 5.9
BC068559-1|AAH68559.1| 875|Homo sapiens vacuolar protein sortin... 30 5.9
BC015817-1|AAH15817.2| 786|Homo sapiens VPS39 protein protein. 30 5.9
AF334400-1|AAK58862.1| 875|Homo sapiens Vps39/Vam6-like protein... 30 5.9
AF281052-1|AAQ05978.1| 875|Homo sapiens VPS39 protein. 30 5.9
AF280814-1|AAK72222.1| 886|Homo sapiens Vam6/Vps39-like protein... 30 5.9
AB018313-1|BAA34490.2| 913|Homo sapiens KIAA0770 protein protein. 30 5.9
>Z98172-1|CAI19895.1| 293|Homo sapiens nuclear undecaprenyl
pyrophosphate synthase 1 homolog (S.\n\ protein.
Length = 293
Score = 50.4 bits (115), Expect = 5e-06
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Frame = +1
Query: 397 IRKLPKHL-VVLYDFDHQ-CLNDLAHVVIWSLVAGIPYLSFYDSTGELKSNEEKLFHEIE 570
+ KLP H+ +V+ + + + +D+A +V+W + GI Y+S YD G K N +L EI
Sbjct: 94 LEKLPVHMGLVITEVEQEPSFSDIASLVVWCMAVGISYISVYDHQGIFKRNNSRLMDEIL 153
Query: 571 KNKRGVPG--CIKWS 609
K ++ + G C K+S
Sbjct: 154 KQQQELLGLDCSKYS 168
>BC110325-1|AAI10326.1| 293|Homo sapiens nuclear undecaprenyl
pyrophosphate synthase 1 homolog (S. cerevisiae)
protein.
Length = 293
Score = 50.4 bits (115), Expect = 5e-06
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Frame = +1
Query: 397 IRKLPKHL-VVLYDFDHQ-CLNDLAHVVIWSLVAGIPYLSFYDSTGELKSNEEKLFHEIE 570
+ KLP H+ +V+ + + + +D+A +V+W + GI Y+S YD G K N +L EI
Sbjct: 94 LEKLPVHMGLVITEVEQEPSFSDIASLVVWCMAVGISYISVYDHQGIFKRNNSRLMDEIL 153
Query: 571 KNKRGVPG--CIKWS 609
K ++ + G C K+S
Sbjct: 154 KQQQELLGLDCSKYS 168
>BC066910-1|AAH66910.1| 293|Homo sapiens nuclear undecaprenyl
pyrophosphate synthase 1 homolog (S. cerevisiae)
protein.
Length = 293
Score = 50.4 bits (115), Expect = 5e-06
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Frame = +1
Query: 397 IRKLPKHL-VVLYDFDHQ-CLNDLAHVVIWSLVAGIPYLSFYDSTGELKSNEEKLFHEIE 570
+ KLP H+ +V+ + + + +D+A +V+W + GI Y+S YD G K N +L EI
Sbjct: 94 LEKLPVHMGLVITEVEQEPSFSDIASLVVWCMAVGISYISVYDHQGIFKRNNSRLMDEIL 153
Query: 571 KNKRGVPG--CIKWS 609
K ++ + G C K+S
Sbjct: 154 KQQQELLGLDCSKYS 168
>BC063794-1|AAH63794.1| 293|Homo sapiens nuclear undecaprenyl
pyrophosphate synthase 1 homolog (S. cerevisiae)
protein.
Length = 293
Score = 50.4 bits (115), Expect = 5e-06
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Frame = +1
Query: 397 IRKLPKHL-VVLYDFDHQ-CLNDLAHVVIWSLVAGIPYLSFYDSTGELKSNEEKLFHEIE 570
+ KLP H+ +V+ + + + +D+A +V+W + GI Y+S YD G K N +L EI
Sbjct: 94 LEKLPVHMGLVITEVEQEPSFSDIASLVVWCMAVGISYISVYDHQGIFKRNNSRLMDEIL 153
Query: 571 KNKRGVPG--CIKWS 609
K ++ + G C K+S
Sbjct: 154 KQQQELLGLDCSKYS 168
>BC013026-1|AAH13026.1| 293|Homo sapiens nuclear undecaprenyl
pyrophosphate synthase 1 homolog (S. cerevisiae)
protein.
Length = 293
Score = 50.4 bits (115), Expect = 5e-06
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Frame = +1
Query: 397 IRKLPKHL-VVLYDFDHQ-CLNDLAHVVIWSLVAGIPYLSFYDSTGELKSNEEKLFHEIE 570
+ KLP H+ +V+ + + + +D+A +V+W + GI Y+S YD G K N +L EI
Sbjct: 94 LEKLPVHMGLVITEVEQEPSFSDIASLVVWCMAVGISYISVYDHQGIFKRNNSRLMDEIL 153
Query: 571 KNKRGVPG--CIKWS 609
K ++ + G C K+S
Sbjct: 154 KQQQELLGLDCSKYS 168
>AL590303-1|CAH71370.1| 293|Homo sapiens nuclear undecaprenyl
pyrophosphate synthase 1 homolog (S.\n\ protein.
Length = 293
Score = 50.4 bits (115), Expect = 5e-06
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Frame = +1
Query: 397 IRKLPKHL-VVLYDFDHQ-CLNDLAHVVIWSLVAGIPYLSFYDSTGELKSNEEKLFHEIE 570
+ KLP H+ +V+ + + + +D+A +V+W + GI Y+S YD G K N +L EI
Sbjct: 94 LEKLPVHMGLVITEVEQEPSFSDIASLVVWCMAVGISYISVYDHQGIFKRNNSRLMDEIL 153
Query: 571 KNKRGVPG--CIKWS 609
K ++ + G C K+S
Sbjct: 154 KQQQELLGLDCSKYS 168
>AL031731-12|CAI20220.1| 176|Homo sapiens MAD2 mitotic arrest
deficient-like 2 (yeast) protein.
Length = 176
Score = 34.7 bits (76), Expect = 0.28
Identities = 16/60 (26%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = +1
Query: 205 LITVTKTNM-LSRLIRQVLFTLVHLFVNVIVWFRNVYHQFSYKKRTTYDVARNNDLKKIL 381
+ T+T+ ++ +++ VL + + V++I++ R VY ++KR Y+V ND++K++
Sbjct: 1 MTTLTRQDLNFGQVVADVLCEFLEVAVHLILYVREVYPVGIFQKRKKYNVPVQNDVEKVV 60
>BX537404-1|CAD97646.1| 875|Homo sapiens hypothetical protein
protein.
Length = 875
Score = 30.3 bits (65), Expect = 5.9
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -2
Query: 598 YIPGRLVCSFLFHGIVSLRCFLI-LL*NHRSSSMVY 494
Y PGRL+C F F G++ R L+ + H + +Y
Sbjct: 663 YDPGRLICDFPFDGLLEERALLLGRMGKHEQALFIY 698
>BC068559-1|AAH68559.1| 875|Homo sapiens vacuolar protein sorting
39 homolog (S. cerevisiae) protein.
Length = 875
Score = 30.3 bits (65), Expect = 5.9
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -2
Query: 598 YIPGRLVCSFLFHGIVSLRCFLI-LL*NHRSSSMVY 494
Y PGRL+C F F G++ R L+ + H + +Y
Sbjct: 663 YDPGRLICDFPFDGLLEERALLLGRMGKHEQALFIY 698
>BC015817-1|AAH15817.2| 786|Homo sapiens VPS39 protein protein.
Length = 786
Score = 30.3 bits (65), Expect = 5.9
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -2
Query: 598 YIPGRLVCSFLFHGIVSLRCFLI-LL*NHRSSSMVY 494
Y PGRL+C F F G++ R L+ + H + +Y
Sbjct: 574 YDPGRLICDFPFDGLLEERALLLGRMGKHEQALFIY 609
>AF334400-1|AAK58862.1| 875|Homo sapiens Vps39/Vam6-like protein
protein.
Length = 875
Score = 30.3 bits (65), Expect = 5.9
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -2
Query: 598 YIPGRLVCSFLFHGIVSLRCFLI-LL*NHRSSSMVY 494
Y PGRL+C F F G++ R L+ + H + +Y
Sbjct: 663 YDPGRLICDFPFDGLLEERALLLGRMGKHEQALFIY 698
>AF281052-1|AAQ05978.1| 875|Homo sapiens VPS39 protein.
Length = 875
Score = 30.3 bits (65), Expect = 5.9
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -2
Query: 598 YIPGRLVCSFLFHGIVSLRCFLI-LL*NHRSSSMVY 494
Y PGRL+C F F G++ R L+ + H + +Y
Sbjct: 663 YDPGRLICDFPFDGLLEERALLLGRMGKHEQALFIY 698
>AF280814-1|AAK72222.1| 886|Homo sapiens Vam6/Vps39-like protein
protein.
Length = 886
Score = 30.3 bits (65), Expect = 5.9
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -2
Query: 598 YIPGRLVCSFLFHGIVSLRCFLI-LL*NHRSSSMVY 494
Y PGRL+C F F G++ R L+ + H + +Y
Sbjct: 674 YDPGRLICDFPFDGLLEERALLLGRMGKHEQALFIY 709
>AB018313-1|BAA34490.2| 913|Homo sapiens KIAA0770 protein protein.
Length = 913
Score = 30.3 bits (65), Expect = 5.9
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -2
Query: 598 YIPGRLVCSFLFHGIVSLRCFLI-LL*NHRSSSMVY 494
Y PGRL+C F F G++ R L+ + H + +Y
Sbjct: 701 YDPGRLICDFPFDGLLEERALLLGRMGKHEQALFIY 736
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,080,093
Number of Sequences: 237096
Number of extensions: 1896424
Number of successful extensions: 10717
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 10606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10716
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6916500330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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