Samia BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_I04
         (445 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g19660.1 68418.m02339 subtilase family protein contains Pfam ...    28   2.5  
At4g10320.1 68417.m01697 isoleucyl-tRNA synthetase, putative / i...    27   7.5  
At1g65390.2 68414.m07419 disease resistance protein (TIR class),...    26   10.0 
At1g65390.1 68414.m07420 disease resistance protein (TIR class),...    26   10.0 
At1g59820.1 68414.m06735 haloacid dehalogenase-like hydrolase fa...    26   10.0 
At1g06030.1 68414.m00631 pfkB-type carbohydrate kinase family pr...    26   10.0 

>At5g19660.1 68418.m02339 subtilase family protein contains Pfam
           profile: PF00082 subtilase family
          Length = 1038

 Score = 28.3 bits (60), Expect = 2.5
 Identities = 20/63 (31%), Positives = 29/63 (46%)
 Frame = +2

Query: 44  VGGGIDYMFKDKIGASATAAHTDFINRNDYSLDGKLNLFKSPDTSVDFNAGFKKFDTPFM 223
           V GG +    + + AS   A  D I   D+S+DG+ + + S    V F AG      P +
Sbjct: 745 VTGGANIPALNNLLASFGIAFGDKILNGDFSIDGEQSRYASGTNIVRFPAGGFLHTFPLL 804

Query: 224 KSS 232
            SS
Sbjct: 805 DSS 807


>At4g10320.1 68417.m01697 isoleucyl-tRNA synthetase, putative /
           isoleucine--tRNA ligase, putative similar to SP|P41252
           Isoleucyl-tRNA synthetase, cytoplasmic (EC 6.1.1.5)
           (Isoleucine--tRNA ligase) (IleRS) (IRS) {Homo sapiens};
           contains Pfam profile PF00133: tRNA synthetases class I
           (I, L, M and V)
          Length = 1190

 Score = 26.6 bits (56), Expect = 7.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 179 VDFNAGFKKFDTPFMKSSW 235
           +DF   +K  D PFM+S W
Sbjct: 143 IDFKNDYKTMDLPFMESVW 161


>At1g65390.2 68414.m07419 disease resistance protein (TIR class),
           putative domain signature TIR exists, suggestive of a
           disease resistance protein.
          Length = 297

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -2

Query: 231 EDFMKGVSNFLKPALKSTEVS 169
           +D  KG  +FLKPALK  +++
Sbjct: 31  KDLRKGFMSFLKPALKKEKIN 51


>At1g65390.1 68414.m07420 disease resistance protein (TIR class),
           putative domain signature TIR exists, suggestive of a
           disease resistance protein.
          Length = 411

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -2

Query: 231 EDFMKGVSNFLKPALKSTEVS 169
           +D  KG  +FLKPALK  +++
Sbjct: 31  KDLRKGFMSFLKPALKKEKIN 51


>At1g59820.1 68414.m06735 haloacid dehalogenase-like hydrolase
           family protein similar to Potential
           phospholipid-transporting ATPase (EC 3.6.3.1) from Mus
           musculus [SP|P70704], {Bos taurus} SP|Q29449; contains
           InterPro accession IPR005834: Haloacid dehalogenase-like
           hydrolase
          Length = 1213

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +2

Query: 5   NMPDIANVPNFNTVGGGIDYMFKDKIG 85
           N P  A   N N   G ++Y+F DK G
Sbjct: 390 NTPASARTSNLNEELGQVEYIFSDKTG 416


>At1g06030.1 68414.m00631 pfkB-type carbohydrate kinase family
           protein contains Pfam profile: PF00294 pfkB family
           carbohydrate kinase
          Length = 329

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = +2

Query: 134 SLDGKLNLFKSPDTSVDFNAGFKKFDTPFMKSSWEPN 244
           S+  K ++ K  D  ++F  G K  D     S W PN
Sbjct: 192 SIWDKADIIKVSDVELEFLTGNKTIDDETAMSLWHPN 228


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,512,361
Number of Sequences: 28952
Number of extensions: 133934
Number of successful extensions: 333
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 333
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 712739520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)