Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_I03
         (626 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   1.6  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    22   4.8  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   6.4  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   8.4  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 10/38 (26%), Positives = 17/38 (44%)
 Frame = +1

Query: 58  VDQNCYTLITAPENYTISIYFMNVNPNYWNDNYYLDIY 171
           VD      +T P+     I F   NP YW  + +++ +
Sbjct: 572 VDAPLKDTVTVPDGGFTIIRFKATNPGYWLFHCHIEFH 609


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 10/35 (28%), Positives = 20/35 (57%)
 Frame = -3

Query: 594 ARKVSWFLGTKRRLYIAYSVN*LHIILLTVNSHIE 490
           +R +   LGT+ R ++   ++ L +   T+N H+E
Sbjct: 439 SRAMDVVLGTEVREFVVNYIDDLLVASETLNEHLE 473


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 11/39 (28%), Positives = 21/39 (53%)
 Frame = -2

Query: 580 LVSRNKTTPLHCLLCQLIAHNSAHS*LPYRTSRILRVTV 464
           LVS+++ + ++  +CQL   + A   +   T    R+TV
Sbjct: 72  LVSKSRKSRMNFFICQLAIADLAVGLISVSTDIAWRITV 110


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/21 (38%), Positives = 9/21 (42%)
 Frame = +1

Query: 82  ITAPENYTISIYFMNVNPNYW 144
           I  P N  +   F   NP YW
Sbjct: 647 IAVPNNGYVIFRFRADNPGYW 667


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,871
Number of Sequences: 336
Number of extensions: 2967
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)