Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_I02
(625 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_52309| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_51974| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.020
SB_41134| Best HMM Match : EGF_CA (HMM E-Value=0) 36 0.027
SB_25669| Best HMM Match : LRR_1 (HMM E-Value=9.1e-33) 35 0.047
SB_48384| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.062
SB_59202| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_289| Best HMM Match : Pkinase_Tyr (HMM E-Value=2.5e-32) 33 0.14
SB_55591| Best HMM Match : TIL (HMM E-Value=4.2e-09) 33 0.19
SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3) 31 0.57
SB_48688| Best HMM Match : Ldl_recept_a (HMM E-Value=7.8e-26) 30 1.3
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_30577| Best HMM Match : Ldl_recept_a (HMM E-Value=2.8e-25) 30 1.3
SB_58926| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0) 30 1.8
SB_34975| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 30 1.8
SB_11375| Best HMM Match : EGF_CA (HMM E-Value=0) 30 1.8
SB_48571| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_44697| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_21594| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_57583| Best HMM Match : DUF572 (HMM E-Value=2.1) 29 4.1
SB_18560| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_41915| Best HMM Match : F5_F8_type_C (HMM E-Value=9.1e-13) 29 4.1
SB_52861| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_41418| Best HMM Match : EGF_CA (HMM E-Value=0) 28 5.4
SB_38935| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_25762| Best HMM Match : VWD (HMM E-Value=2.2e-16) 28 5.4
SB_17530| Best HMM Match : EGF_CA (HMM E-Value=0) 28 5.4
SB_16748| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_4999| Best HMM Match : EGF_CA (HMM E-Value=0) 28 5.4
SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0) 28 7.1
SB_32719| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_22765| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_5376| Best HMM Match : EGF_CA (HMM E-Value=0) 28 7.1
SB_59041| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_38160| Best HMM Match : Toxin_29 (HMM E-Value=3.7) 27 9.4
SB_18191| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
>SB_52309| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 386
Score = 43.2 bits (97), Expect = 2e-04
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 6/106 (5%)
Frame = +3
Query: 54 CTGKNEFYMCGPACDNV--CSELHEQNRTHCPILNIMCNRKCYCYDGYARDENNVCIPVE 227
CT K+ FY G +CD++ C + + H N + + C C DG+ R C ++
Sbjct: 164 CTCKSGFYGNGASCDDIDECRDASHKCSPHAICYNTLGSFVCSCKDGF-RGNGAYCRDID 222
Query: 228 QCKNPAIKQKRHV----KEGTFRCAPANSLESQCTSRLSTFIILDH 353
+C++ + K H G+FRC+ + S LDH
Sbjct: 223 ECRDASHKCSLHATCYNTLGSFRCSCKVGFHGDGKTCHSNVAKLDH 268
>SB_51974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3474
Score = 36.3 bits (80), Expect = 0.020
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Frame = +3
Query: 150 NIMCNRKCYCYDGYARD-ENNVCIPVEQCKNPA--IKQKRHVKEGTFRC 287
N+ C+CY GYA D + CI VE+C + A Q + +G+F C
Sbjct: 766 NLYGTFSCFCYRGYALDSDKRTCIDVEECSSGAHGCSQICNNTQGSFHC 814
Score = 31.5 bits (68), Expect = 0.57
Identities = 39/159 (24%), Positives = 60/159 (37%), Gaps = 9/159 (5%)
Frame = +3
Query: 171 CYCYDGYARDENNV-CIPVEQCKNPA-IKQKRHVK---EGTFRCAPANS---LESQCTSR 326
C C +G A E+ C+ V++C A + V + T +C P L +C +
Sbjct: 378 CTCPEGLALSEDGKSCVDVDECSTGANVCNDNCVNLYGKYTCQCGPGYEFDWLNRRCCQK 437
Query: 327 LSTFIILDHIVT*YQVTGPHRYVISVSCTGPNEEHYASKKTCPPELCFSLVARFKCDAXE 506
+S F +I Y YV+S T + C ++ A
Sbjct: 438 VSCFPRCSNINGNYSCECSAGYVLSSDFTS----------CLDVDECLTIPAICNQTCSN 487
Query: 507 TPKSG-CFCKPGYLREKDNTPCIPXCKCPEMRSSPDCEQ 620
P S C C GY DNT C+ +C ++ +CEQ
Sbjct: 488 IPGSYVCSCVTGYYLGVDNTTCLDLDEC--STNANNCEQ 524
>SB_41134| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 802
Score = 35.9 bits (79), Expect = 0.027
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = +3
Query: 96 DNVCSELHEQNRTHCPILNIMCNRKCYCYDGYARDENNVCIPVEQCKNPAIKQKRHVKEG 275
D S +H Q +N N C C GY D N C+ +++C +P + + +H+
Sbjct: 665 DECASGIH-QCEEGATCVNTPGNYSCLCPQGYRSDWNK-CVDIDECADPQVNKCQHICNN 722
Query: 276 T 278
T
Sbjct: 723 T 723
>SB_25669| Best HMM Match : LRR_1 (HMM E-Value=9.1e-33)
Length = 1065
Score = 35.1 bits (77), Expect = 0.047
Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
Frame = +3
Query: 30 RNFDDPIECTGKNEFYMCGPACDNV--CSELHEQNRTHCPILNIMCNRKCYCYDGYARD- 200
RN + +EC K+ ++ G C+++ C H ++ H +N + C C GY
Sbjct: 451 RNINRRLECVCKSGYHGDGVTCEDIDECDIAHHCDKLHATCINTPGSHTCRCNKGYIDKI 510
Query: 201 ---ENNVCIPVEQC 233
+CI +C
Sbjct: 511 PALPGKICINENEC 524
>SB_48384| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1678
Score = 34.7 bits (76), Expect = 0.062
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 147 LNIMCNRKCYCYDGYARDENNVCIPVEQC 233
+N + KC C GYA +++NVC+ V +C
Sbjct: 803 INTYGSYKCSCKRGYAHNDSNVCVDVNEC 831
>SB_59202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1530
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/64 (28%), Positives = 26/64 (40%)
Frame = +3
Query: 42 DPIECTGKNEFYMCGPACDNVCSELHEQNRTHCPILNIMCNRKCYCYDGYARDENNVCIP 221
+P+ C E C AC CS ++ C N C C+C +G +D C+
Sbjct: 752 EPVTCPSGMEHSECSSACPRDCSNMNSDPNA-C---NSKCVDGCFCPEGKIQDRGK-CVD 806
Query: 222 VEQC 233
QC
Sbjct: 807 PGQC 810
Score = 33.5 bits (73), Expect = 0.14
Identities = 22/69 (31%), Positives = 27/69 (39%), Gaps = 1/69 (1%)
Frame = +3
Query: 33 NFDDPIECTGKNEFYM-CGPACDNVCSELHEQNRTHCPILNIMCNRKCYCYDGYARDENN 209
N D C + Y CG C+N LH N P C CYC DG +N
Sbjct: 1214 NVDCEAMCLTRGLVYSDCGITCEN----LHPINGGERP-----CVSGCYCPDGLIMHDNG 1264
Query: 210 VCIPVEQCK 236
C+ QC+
Sbjct: 1265 TCVQSMQCQ 1273
>SB_289| Best HMM Match : Pkinase_Tyr (HMM E-Value=2.5e-32)
Length = 773
Score = 33.5 bits (73), Expect = 0.14
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Frame = +3
Query: 150 NIMCNRKCYCYDGYARDE-NNVCIPVEQCKNPAIKQKRHVKEGTFRC---APANSLESQC 317
N+ + KCYC GYA D+ NN C + C P + G C A N+L ++C
Sbjct: 241 NLSGDVKCYCKKGYAYDKVNNDC---KGCP-PGNFKSTLSNTGCRPCPENAQPNTLRTEC 296
Query: 318 TSRLSTFIILDHIVT 362
R F +L+H +T
Sbjct: 297 VCRNEYFRLLNHNMT 311
>SB_55591| Best HMM Match : TIL (HMM E-Value=4.2e-09)
Length = 133
Score = 33.1 bits (72), Expect = 0.19
Identities = 18/63 (28%), Positives = 25/63 (39%)
Frame = +3
Query: 45 PIECTGKNEFYMCGPACDNVCSELHEQNRTHCPILNIMCNRKCYCYDGYARDENNVCIPV 224
P+ C E C AC CS ++ C N C C+C +G +D C+
Sbjct: 54 PVTCPSGMEHSECNSACPRDCSNMNSDPNA-C---NSKCVDGCFCPEGKIQDRGK-CVDP 108
Query: 225 EQC 233
QC
Sbjct: 109 GQC 111
>SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3)
Length = 350
Score = 31.5 bits (68), Expect = 0.57
Identities = 20/62 (32%), Positives = 28/62 (45%)
Frame = +3
Query: 417 PNEEHYASKKTCPPELCFSLVARFKCDAXETPKSGCFCKPGYLREKDNTPCIPXCKCPEM 596
PNE+ + CPP F R D+ ET G +CK G + D+ C P C +
Sbjct: 270 PNEDTF--NWGCPPG--FWCRKRRSVDSDETCPPGFWCKRGVYNDNDDGNCPPGFWCKKK 325
Query: 597 RS 602
R+
Sbjct: 326 RN 327
>SB_48688| Best HMM Match : Ldl_recept_a (HMM E-Value=7.8e-26)
Length = 351
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +3
Query: 90 ACDNVCSELHEQNRTHCPILNIMCNRKCYCYDGYARDENNVC 215
+CDN CS H C ++ CN C DG DE +C
Sbjct: 107 SCDNSCSSRHACADGTCVTWSLTCNGVSDCQDG--SDEPKLC 146
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 30.3 bits (65), Expect = 1.3
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +3
Query: 171 CYCYDGYARDENNVCIPVEQCK 236
C C +GY RD C V +CK
Sbjct: 484 CQCAEGYERDSQGKCADVNECK 505
>SB_30577| Best HMM Match : Ldl_recept_a (HMM E-Value=2.8e-25)
Length = 147
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +3
Query: 90 ACDNVCSELHEQNRTHCPILNIMCNRKCYCYDGYARDENNVC 215
+CDN CS H C ++ CN C DG DE +C
Sbjct: 107 SCDNSCSSRHACADGTCVTWSLTCNGVSDCQDG--SDEPKLC 146
>SB_58926| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2371
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = -1
Query: 319 VHWLSSEFAGAHLKVPSLTWR--FCLMAGFLHCS 224
V+WL F H++V TWR CL F C+
Sbjct: 1133 VNWLQYPFMSRHVRVTPQTWRNAICLRVDFYGCA 1166
>SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 921
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/64 (21%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Frame = +3
Query: 105 CSELHEQNRTHCPILNIMCNRKCYCYDGYARDENNVCIPVEQCKNPAI---KQKRHVKEG 275
C+ H + N + + C C+ GY + C+ V++C + ++ +Q + G
Sbjct: 564 CARNHGKGDCEHLCTNTVGSFSCSCHQGYRLKGKHQCVDVDECSDNSLNRCQQTCNNSIG 623
Query: 276 TFRC 287
+F+C
Sbjct: 624 SFKC 627
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Frame = +3
Query: 168 KCYCYDGY-ARDENNVCIPVEQCKNPAIKQKRHV---KEGTFRCA 290
KC C GY +N CI ++C NP + HV G++ CA
Sbjct: 295 KCQCRAGYHLHSDNKQCIDDDECSNP--NRCDHVCINNPGSYACA 337
Score = 28.3 bits (60), Expect = 5.4
Identities = 34/142 (23%), Positives = 52/142 (36%), Gaps = 1/142 (0%)
Frame = +3
Query: 147 LNIMCNRKCYCYDGYARD-ENNVCIPVEQCKNPAIKQKRHVKEGTFRCAPANSLESQCTS 323
+N + KC C DGY D C+ +++C + H K E CT+
Sbjct: 535 INTYGSYKCQCLDGYRLDARTEQCVDIDEC------ARNHGK---------GDCEHLCTN 579
Query: 324 RLSTFIILDHIVT*YQVTGPHRYVISVSCTGPNEEHYASKKTCPPELCFSLVARFKCDAX 503
+ +F H Y++ G H+ C +E S C + C + + FKC
Sbjct: 580 TVGSFSCSCH--QGYRLKGKHQ------CVDVDECSDNSLNRC-QQTCNNSIGSFKCT-- 628
Query: 504 ETPKSGCFCKPGYLREKDNTPC 569
C+PGY D C
Sbjct: 629 --------CRPGYHLAIDGFSC 642
>SB_34975| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 909
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = -1
Query: 319 VHWLSSEFAGAHLKVPSLTWR--FCLMAGFLHCS 224
V+WL F H++V TWR CL F C+
Sbjct: 875 VNWLQYPFMSRHVRVTPQTWRNAICLRVDFYGCA 908
>SB_11375| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 651
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Frame = +3
Query: 33 NFDDPIECTGKNEFYMC--GPACDNVCSELHEQNRTHCPILNIMCNRKCYCYDGYARD-E 203
NF CT + F + C++ E + N N+ + +C CY GY D +
Sbjct: 203 NFPGGYNCTCNSGFILIPDNRTCNDT-DECLDSNTCQQTCTNLPGSYRCSCYKGYELDLD 261
Query: 204 NNVCIPVEQCK 236
C ++CK
Sbjct: 262 GKTCSDKDECK 272
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +3
Query: 489 KCDAXETPKSG---CFCKPGYLREKDNTPCIPXCKCPEMRSSPDCEQS 623
KC T +G C C+ GY + DNT C +C + S+ +C +
Sbjct: 72 KCQYSCTNTNGSFYCSCRHGYALQADNTTCADINEC--VTSNGNCSHT 117
>SB_48571| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 366
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/78 (23%), Positives = 32/78 (41%)
Frame = +3
Query: 126 NRTHCPILNIMCNRKCYCYDGYARDENNVCIPVEQCKNPAIKQKRHVKEGTFRCAPANSL 305
N HC N + NRK G R + ++ +QC + +GT +
Sbjct: 163 NNAHCEHCNALINRKEAAVVGETRGKVSITFKCKQCGGQTCVSDENTIDGTPEKGHTYVI 222
Query: 306 ESQCTSRLSTFIILDHIV 359
SQ +S ++ ++ H+V
Sbjct: 223 SSQLSSWVNA-VVAGHLV 239
>SB_44697| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 628
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +1
Query: 160 ATENAIVTMDTPEMRITCAYPSNSVKIQPLNKNATLKRGPLDVLRQIHLKASVPL 324
A EN ++ + + I C + IQ LNK + LK PL+ L+Q+H + S L
Sbjct: 482 AAENQVLAL---KQEIECLQSDSH--IQSLNKKSELKDLPLERLKQLHHRLSTDL 531
>SB_21594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1075
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = +3
Query: 513 KSGCF-CKPGYLREKDNTPCIPXCKCPEMRSSPDCE 617
K G F C G E D +P C CPE S CE
Sbjct: 470 KDGSFTCSNGGTCEVDCKTLVPRCHCPEGFSGDKCE 505
>SB_57583| Best HMM Match : DUF572 (HMM E-Value=2.1)
Length = 638
Score = 28.7 bits (61), Expect = 4.1
Identities = 20/47 (42%), Positives = 27/47 (57%)
Frame = -1
Query: 166 LLHIIFRIGQWVLFCSCNSEQTLSQAGPHM*NSFLPVHSIGSSKLRL 26
L+H++FR+ QW F S QTLS SF PV+SI ++RL
Sbjct: 604 LIHVLFRLVQWPGFLS----QTLS--------SFRPVNSIAILRIRL 638
>SB_18560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1937
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/63 (23%), Positives = 24/63 (38%), Gaps = 2/63 (3%)
Frame = +3
Query: 51 ECTGKNEFYMCGPACDNV--CSELHEQNRTHCPILNIMCNRKCYCYDGYARDENNVCIPV 224
+C + + G C ++ C + HE + N + C C GY D C P+
Sbjct: 858 QCVCERGYQGNGEDCKDINECEQNHECDPLKAVCTNTEGSYSCTCRPGYGGD-GRTCTPI 916
Query: 225 EQC 233
C
Sbjct: 917 SSC 919
>SB_41915| Best HMM Match : F5_F8_type_C (HMM E-Value=9.1e-13)
Length = 317
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3
Query: 126 NRTHCPILNIMCNRKCYCYDGYARDENNVCIPVEQCKNPAI 248
N+ C + +M KCYC +GY +C + CK+P I
Sbjct: 135 NKATCVNVPMMPGYKCYCQEGYT---GELC---QDCKSPPI 169
>SB_52861| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1487
Score = 28.3 bits (60), Expect = 5.4
Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 7/75 (9%)
Frame = +3
Query: 378 GPHR--YVISVSCTGPNEEHYASKKTCPPELCFSLVARFKCDAXE----TPKS-GCFCKP 536
GP + Y ++ T P +AS CP E L R C A + TP+ C CKP
Sbjct: 165 GPQKTNYNVTTHITTPAAPIWASL-LCPLEN-ECLNGRHNCSALQNCVDTPEFFRCVCKP 222
Query: 537 GYLREKDNTPCIPXC 581
GY + + C+P C
Sbjct: 223 GY-EQALSGQCVPVC 236
>SB_41418| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 3312
Score = 28.3 bits (60), Expect = 5.4
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Frame = +3
Query: 105 CSELHEQNRTH--CP--ILNIMCNRKCYCYDGYARDEN-NVCIPVEQCK-NPAIKQKRHV 266
C +++E R + C +NI+ +C C DGY + N C +++C + H
Sbjct: 433 CVDINECKRNNGWCEHECINIIGTYRCRCRDGYKLEPNRRTCQDLDECALFSGCEMLCHN 492
Query: 267 KEGTFRCA 290
G++ CA
Sbjct: 493 TRGSYYCA 500
>SB_38935| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 281
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = +3
Query: 84 GPACDNV--CSELHEQNRTHCPILNIMCNRKCYCYDGYARDENNVCIPVEQCKN 239
G C +V C+ E LN + + +C C +GY D C +++C N
Sbjct: 182 GKTCIDVDECAGGTEMCALEASCLNTLGSFRCNCMEGYTGD-GKTCQDIDECTN 234
>SB_25762| Best HMM Match : VWD (HMM E-Value=2.2e-16)
Length = 705
Score = 28.3 bits (60), Expect = 5.4
Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 4/80 (5%)
Frame = +3
Query: 48 IECTGKNEFYMCGPACDNVCSELHEQNRTHCPILNIMCNRKCYCYDGYARDENNV----C 215
+ C F C AC C + +N+T C ++ C C C + + + N V C
Sbjct: 178 VTCPENAVFKYCTSACPETCHDPPGRNKT-C---SMRCVEGCECKEEFVQRVNAVGKVQC 233
Query: 216 IPVEQCKNPAIKQKRHVKEG 275
I ++C P I + K G
Sbjct: 234 IKRKEC--PCIHDAKIYKPG 251
>SB_17530| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 165
Score = 28.3 bits (60), Expect = 5.4
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 171 CYCYDGYARDENNVCIPVEQCK 236
C C +GY R+ C V +CK
Sbjct: 27 CQCAEGYERNSQGKCADVNECK 48
>SB_16748| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 280
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = +3
Query: 513 KSGCF-CKPGYLREKDNTPCIPXCKCPEMRSSPDCE 617
K G F C G E D +P C CPE S CE
Sbjct: 129 KDGSFTCSNGGTCEIDCKTLVPRCLCPEGFSGDKCE 164
>SB_4999| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 1054
Score = 28.3 bits (60), Expect = 5.4
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +3
Query: 177 CYDGYARDENNVCIPVEQC 233
C GYA +++NVC+ V +C
Sbjct: 34 CKRGYAYNDSNVCVDVNEC 52
>SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0)
Length = 3891
Score = 27.9 bits (59), Expect = 7.1
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
Frame = +3
Query: 396 ISVSCTGPNE--EHYASKKTCPPELCFSLVARFKCDAXETPKSG-CFCKPGYLREKDNTP 566
+S C G N+ ++Y C C +C +TP+ G C C PGY KD
Sbjct: 143 LSRVCDGTNDCGDNYDEGSHCLDLDCKKKNCSQRC--VQTPRGGECRCFPGYTISKDLIT 200
Query: 567 C 569
C
Sbjct: 201 C 201
>SB_32719| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 27.9 bits (59), Expect = 7.1
Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 5/74 (6%)
Frame = +3
Query: 33 NFDDPIECTGKNEFYMCGPACDNV--CSELHEQNRTHCPILNIMCNRKCYC---YDGYAR 197
N +C EFY G C+ + C+ +N C ++ CYC Y G
Sbjct: 209 NIGASYKCNCPPEFY--GKHCEALSKCTPNPCKNDGTCRDISTGRGFVCYCSIAYLGPNC 266
Query: 198 DENNVCIPVEQCKN 239
D N+C P CKN
Sbjct: 267 DRKNLCHPDNPCKN 280
>SB_22765| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1387
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
Frame = +3
Query: 45 PIECTGKNEFYMCGPACD---NVCSELHEQNR-THCPI-LNIMCNRKC 173
P ECT E + C PA D + ++H ++R CP C++ C
Sbjct: 1185 PTECTPSCELHCCAPAHDTYQRIYPQVHARSRMVSCPAKCASQCDKSC 1232
>SB_5376| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 1705
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 171 CYCYDGYARDENNVCIPVEQCKNPAI 248
C C GY+ D N C+ + +CK A+
Sbjct: 1260 CTCNVGYSGD-GNTCVDINECKTTAL 1284
>SB_59041| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 350
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1
Query: 349 SRMMNVLSLEVHWLSSEFAGAHLKVP 272
SR ++VLSL WL S+ A A + +P
Sbjct: 175 SRTIDVLSLSETWLDSQTADAEINLP 200
>SB_38160| Best HMM Match : Toxin_29 (HMM E-Value=3.7)
Length = 534
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/45 (26%), Positives = 20/45 (44%)
Frame = +3
Query: 75 YMCGPACDNVCSELHEQNRTHCPILNIMCNRKCYCYDGYARDENN 209
Y G D +C++ E ++T C + C C +AR + N
Sbjct: 457 YQTGAGYDEICTQRREISKTRCDLFQTSDKSLCCCV--FARYKGN 499
>SB_18191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1008
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 153 IMCNRKC-YCYDGYARDENNVCIPVEQCKNPAIKQKRHVKEG 275
+ CN++C +DGY R N IP Q +P + R K+G
Sbjct: 749 LYCNQECGLLWDGYGRWFNGSWIPQIQAPSPLSRSARR-KQG 789
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,961,161
Number of Sequences: 59808
Number of extensions: 509660
Number of successful extensions: 1479
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1474
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1548368000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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