Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_H24
(529 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical pr... 30 1.2
AF067937-7|AAN84819.1| 392|Caenorhabditis elegans Hypothetical ... 29 2.1
AF067937-6|AAF99915.1| 426|Caenorhabditis elegans Hypothetical ... 29 2.1
Z68752-7|CAA92982.2| 693|Caenorhabditis elegans Hypothetical pr... 27 6.3
U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical pr... 27 6.3
U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical pr... 27 6.3
Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical pr... 27 8.3
AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical ... 27 8.3
AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein. 27 8.3
AC024805-3|AAK39338.1| 801|Caenorhabditis elegans Hypothetical ... 27 8.3
>Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical protein
F32H2.5 protein.
Length = 2586
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +3
Query: 258 IGSLDLTNRQKLGAATAGVALDNVNGHGVSLTDTHIPGFGD 380
IG +DL+ LG A LDNV+ HG+ L P GD
Sbjct: 1832 IGKVDLSQNSSLGMAKL---LDNVSVHGILLDSIMDPTVGD 1869
>AF067937-7|AAN84819.1| 392|Caenorhabditis elegans Hypothetical
protein F22F7.1b protein.
Length = 392
Score = 29.1 bits (62), Expect = 2.1
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 210 GVKVPFAGNDKNIVSAIGSLDLTNRQ 287
GV VPF G DK+I++ D T+RQ
Sbjct: 237 GVAVPFPGADKSIINRSQYYDATSRQ 262
>AF067937-6|AAF99915.1| 426|Caenorhabditis elegans Hypothetical
protein F22F7.1a protein.
Length = 426
Score = 29.1 bits (62), Expect = 2.1
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 210 GVKVPFAGNDKNIVSAIGSLDLTNRQ 287
GV VPF G DK+I++ D T+RQ
Sbjct: 237 GVAVPFPGADKSIINRSQYYDATSRQ 262
>Z68752-7|CAA92982.2| 693|Caenorhabditis elegans Hypothetical
protein T12G3.1 protein.
Length = 693
Score = 27.5 bits (58), Expect = 6.3
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = -1
Query: 322 SSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKGTLTPAPEVPSELS--VRAPCASLRTL 149
+SATPAV AP+ + V PI T+ + L P P E++ V AP + +
Sbjct: 534 TSATPAVTAPASIVPVTPTAPIVETLIVP-----PLPPVESNPEEVTPMVTAPISIHSSF 588
Query: 148 ELVNSSGSS 122
E ++S S
Sbjct: 589 ENISSDFES 597
>U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical
protein F56D2.6b protein.
Length = 700
Score = 27.5 bits (58), Expect = 6.3
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +1
Query: 106 TIFNTMRSLNY*QALESAGTRTELSRSTPMVPLVLELKYPLLVTTRI 246
T+ + LNY QA+ G TEL PL +L L+ +T +
Sbjct: 479 TLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTEL 525
>U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical
protein F56D2.6a protein.
Length = 739
Score = 27.5 bits (58), Expect = 6.3
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +1
Query: 106 TIFNTMRSLNY*QALESAGTRTELSRSTPMVPLVLELKYPLLVTTRI 246
T+ + LNY QA+ G TEL PL +L L+ +T +
Sbjct: 479 TLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTEL 525
>Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical
protein Y76A2B.1 protein.
Length = 1057
Score = 27.1 bits (57), Expect = 8.3
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -1
Query: 385 TLSPNPGMCVSVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPI 257
T+SP P V TP T S +TP+V P+F V + P+
Sbjct: 485 TISPEPVTIVKPASTP--ATDSVSTPSVVGPAFGKKVPEQPPV 525
>AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical
protein Y76A2B.1 protein.
Length = 1057
Score = 27.1 bits (57), Expect = 8.3
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -1
Query: 385 TLSPNPGMCVSVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPI 257
T+SP P V TP T S +TP+V P+F V + P+
Sbjct: 485 TISPEPVTIVKPASTP--ATDSVSTPSVVGPAFGKKVPEQPPV 525
>AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein.
Length = 1057
Score = 27.1 bits (57), Expect = 8.3
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -1
Query: 385 TLSPNPGMCVSVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPI 257
T+SP P V TP T S +TP+V P+F V + P+
Sbjct: 485 TISPEPVTIVKPASTP--ATDSVSTPSVVGPAFGKKVPEQPPV 525
>AC024805-3|AAK39338.1| 801|Caenorhabditis elegans Hypothetical
protein Y51H7C.6a protein.
Length = 801
Score = 27.1 bits (57), Expect = 8.3
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 78 RYLIVSEPVYYIQHYEEPELLTSSRVRRDAHGAL 179
R L+ +EP+ + +Y+ LLTSS + R +L
Sbjct: 671 RLLVENEPLLFADNYQTLLLLTSSEIARQIEQSL 704
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,444,527
Number of Sequences: 27780
Number of extensions: 255549
Number of successful extensions: 749
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 720
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 749
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1038911524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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