Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_H23
         (542 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_43153| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.1  
SB_34900| Best HMM Match : 7tm_1 (HMM E-Value=2.5e-12)                 29   3.2  
SB_32235| Best HMM Match : Peptidase_A17 (HMM E-Value=4.2e-08)         28   5.7  
SB_29392| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.5  
SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0)                      27   9.9  

>SB_43153| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 380

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 18/42 (42%), Positives = 23/42 (54%)
 Frame = +2

Query: 332 SCSIFLGGQRTLPVLLINLHERGTKFIGFDADIFVCTSTRGF 457
           S  +F GG +TLP +  NL+ + T F GF      C ST GF
Sbjct: 20  SADVF-GGSKTLPGISSNLNPKPTGFSGFG-----CNSTAGF 55


>SB_34900| Best HMM Match : 7tm_1 (HMM E-Value=2.5e-12)
          Length = 433

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +3

Query: 138 IANKIDVALWAIRVLTVLCTIGYLIPIFNNP 230
           I N ++V +WA+ VL  +  I  L+ I+ NP
Sbjct: 15  IFNSLEVLVWAVTVLCFVAPILVLLIIYRNP 45


>SB_32235| Best HMM Match : Peptidase_A17 (HMM E-Value=4.2e-08)
          Length = 525

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = -3

Query: 504 PTSNSVQGYRVW*ESRKP-RVEVQTKISASKPINLVPRS 391
           PT  S Q ++ W ESR P R+EV  +IS   P+ + PR+
Sbjct: 166 PTEIS-QRWKAW-ESRLPERIEVPRRISGHYPLYIPPRT 202


>SB_29392| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 104

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = +3

Query: 330 FLARFFLEDSAHYLFYSLIFMNVAPNLL-VLTPIF 431
           F+ R+FL D+   +FY + +    P++L VL+ IF
Sbjct: 8   FIIRYFLPDALSGIFYPMFYRVFLPDVLDVLSGIF 42


>SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0)
          Length = 921

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +2

Query: 410 IGFDADIFVCTSTRGFLLSHHTRYPWTEFDVGGATVDLSG 529
           I  +AD+    +T G+  +H   +PWT     G  +D+ G
Sbjct: 653 IALEADLANLAATPGWQPAHANSWPWTALLHFGGFLDIEG 692


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,950,323
Number of Sequences: 59808
Number of extensions: 330468
Number of successful extensions: 757
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 757
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1239956166
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)