Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_H23
(542 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457260-1|CAG33541.1| 247|Homo sapiens FLJ10525 protein. 129 7e-30
BC000948-1|AAH00948.2| 247|Homo sapiens transmembrane protein 3... 129 7e-30
AY659966-1|AAV70491.1| 247|Homo sapiens SHINC3 protein. 129 7e-30
AK023062-1|BAB14384.1| 247|Homo sapiens protein ( Homo sapiens ... 129 7e-30
AK001387-1|BAA91665.1| 247|Homo sapiens protein ( Homo sapiens ... 129 7e-30
BC001210-1|AAH01210.1| 487|Homo sapiens phosphatidylserine synt... 30 4.6
BC036233-1|AAH36233.1| 946|Homo sapiens WDR66 protein protein. 29 8.0
AB065753-1|BAC05973.1| 298|Homo sapiens seven transmembrane hel... 29 8.0
>CR457260-1|CAG33541.1| 247|Homo sapiens FLJ10525 protein.
Length = 247
Score = 129 bits (311), Expect = 7e-30
Identities = 68/147 (46%), Positives = 100/147 (68%), Gaps = 4/147 (2%)
Frame = +3
Query: 93 DTGP--PKGIPALKAHVIANKIDVALWAIRVLTVLCTIGYLIPIFN-NPVSAFY-KALLA 260
DT P P+G A++ ++ NK+D A+W R+ TV C+ +++P+ + ++FY +ALLA
Sbjct: 3 DTTPNGPQGAGAVQ-FMMTNKLDTAMWLSRLFTVYCSALFVLPLLGLHEAASFYQRALLA 61
Query: 261 NAATSALRLHQRIPAREISISREFLARFFLEDSAHYLFYSLIFMNVAPNLLVLTPIFLFA 440
NA TSALRLHQR+P +SR FLA+ LEDS HYL YSLIF+N P + + P+ LF+
Sbjct: 62 NALTSALRLHQRLP--HFQLSRAFLAQALLEDSCHYLLYSLIFVNSYPVTMSIFPVLLFS 119
Query: 441 LLHAASYSLTILDTLGQNSMWVARLLI 521
LLHAA+Y+ +LD G NS+ + R ++
Sbjct: 120 LLHAATYTKKVLDARGSNSLPLLRSVL 146
>BC000948-1|AAH00948.2| 247|Homo sapiens transmembrane protein 33
protein.
Length = 247
Score = 129 bits (311), Expect = 7e-30
Identities = 68/147 (46%), Positives = 100/147 (68%), Gaps = 4/147 (2%)
Frame = +3
Query: 93 DTGP--PKGIPALKAHVIANKIDVALWAIRVLTVLCTIGYLIPIFN-NPVSAFY-KALLA 260
DT P P+G A++ ++ NK+D A+W R+ TV C+ +++P+ + ++FY +ALLA
Sbjct: 3 DTTPNGPQGAGAVQ-FMMTNKLDTAMWLSRLFTVYCSALFVLPLLGLHEAASFYQRALLA 61
Query: 261 NAATSALRLHQRIPAREISISREFLARFFLEDSAHYLFYSLIFMNVAPNLLVLTPIFLFA 440
NA TSALRLHQR+P +SR FLA+ LEDS HYL YSLIF+N P + + P+ LF+
Sbjct: 62 NALTSALRLHQRLP--HFQLSRAFLAQALLEDSCHYLLYSLIFVNSYPVTMSIFPVLLFS 119
Query: 441 LLHAASYSLTILDTLGQNSMWVARLLI 521
LLHAA+Y+ +LD G NS+ + R ++
Sbjct: 120 LLHAATYTKKVLDARGSNSLPLLRSVL 146
>AY659966-1|AAV70491.1| 247|Homo sapiens SHINC3 protein.
Length = 247
Score = 129 bits (311), Expect = 7e-30
Identities = 68/147 (46%), Positives = 100/147 (68%), Gaps = 4/147 (2%)
Frame = +3
Query: 93 DTGP--PKGIPALKAHVIANKIDVALWAIRVLTVLCTIGYLIPIFN-NPVSAFY-KALLA 260
DT P P+G A++ ++ NK+D A+W R+ TV C+ +++P+ + ++FY +ALLA
Sbjct: 3 DTTPSGPQGAGAVQ-FMMTNKLDTAMWLSRLFTVYCSALFVLPLLGLHEAASFYQRALLA 61
Query: 261 NAATSALRLHQRIPAREISISREFLARFFLEDSAHYLFYSLIFMNVAPNLLVLTPIFLFA 440
NA TSALRLHQR+P +SR FLA+ LEDS HYL YSLIF+N P + + P+ LF+
Sbjct: 62 NALTSALRLHQRLP--HFQLSRAFLAQALLEDSCHYLLYSLIFVNSYPVTMSIFPVLLFS 119
Query: 441 LLHAASYSLTILDTLGQNSMWVARLLI 521
LLHAA+Y+ +LD G NS+ + R ++
Sbjct: 120 LLHAATYTKKVLDARGSNSLPLLRSVL 146
>AK023062-1|BAB14384.1| 247|Homo sapiens protein ( Homo sapiens
cDNA FLJ13000 fis, clone NT2RP3000333, highly similar to
Rattus norvegicus db83 mRNA. ).
Length = 247
Score = 129 bits (311), Expect = 7e-30
Identities = 68/147 (46%), Positives = 100/147 (68%), Gaps = 4/147 (2%)
Frame = +3
Query: 93 DTGP--PKGIPALKAHVIANKIDVALWAIRVLTVLCTIGYLIPIFN-NPVSAFY-KALLA 260
DT P P+G A++ ++ NK+D A+W R+ TV C+ +++P+ + ++FY +ALLA
Sbjct: 3 DTTPNGPQGAGAVQ-FMMTNKLDTAMWLSRLFTVYCSALFVLPLLGLHEAASFYQRALLA 61
Query: 261 NAATSALRLHQRIPAREISISREFLARFFLEDSAHYLFYSLIFMNVAPNLLVLTPIFLFA 440
NA TSALRLHQR+P +SR FLA+ LEDS HYL YSLIF+N P + + P+ LF+
Sbjct: 62 NALTSALRLHQRLP--HFQLSRAFLAQALLEDSCHYLLYSLIFVNSYPVTMSIFPVLLFS 119
Query: 441 LLHAASYSLTILDTLGQNSMWVARLLI 521
LLHAA+Y+ +LD G NS+ + R ++
Sbjct: 120 LLHAATYTKKVLDARGSNSLPLLRSVL 146
>AK001387-1|BAA91665.1| 247|Homo sapiens protein ( Homo sapiens
cDNA FLJ10525 fis, clone NT2RP2000892. ).
Length = 247
Score = 129 bits (311), Expect = 7e-30
Identities = 68/147 (46%), Positives = 100/147 (68%), Gaps = 4/147 (2%)
Frame = +3
Query: 93 DTGP--PKGIPALKAHVIANKIDVALWAIRVLTVLCTIGYLIPIFN-NPVSAFY-KALLA 260
DT P P+G A++ ++ NK+D A+W R+ TV C+ +++P+ + ++FY +ALLA
Sbjct: 3 DTTPSGPQGAGAVQ-FMMTNKLDTAMWLSRLFTVYCSALFVLPLLGLHEAASFYQRALLA 61
Query: 261 NAATSALRLHQRIPAREISISREFLARFFLEDSAHYLFYSLIFMNVAPNLLVLTPIFLFA 440
NA TSALRLHQR+P +SR FLA+ LEDS HYL YSLIF+N P + + P+ LF+
Sbjct: 62 NALTSALRLHQRLP--HFQLSRAFLAQALLEDSCHYLLYSLIFVNSYPVTMSIFPVLLFS 119
Query: 441 LLHAASYSLTILDTLGQNSMWVARLLI 521
LLHAA+Y+ +LD G NS+ + R ++
Sbjct: 120 LLHAATYTKKVLDARGSNSLPLLRSVL 146
>BC001210-1|AAH01210.1| 487|Homo sapiens phosphatidylserine
synthase 2 protein.
Length = 487
Score = 30.3 bits (65), Expect = 4.6
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Frame = +3
Query: 81 PQSGD-TGPPKGIPALKAHVIANKIDVALWAIRVLTVL----CTIGYLIPIFNNPVSAFY 245
P +G TGP +G + ++ V + + W LTVL CT+GY+ + P Y
Sbjct: 32 PSAGQATGPGEGRRSTESEVYDDGTNTFFWRAHTLTVLFILTCTLGYVTLLEETPQDTAY 91
>BC036233-1|AAH36233.1| 946|Homo sapiens WDR66 protein protein.
Length = 946
Score = 29.5 bits (63), Expect = 8.0
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +3
Query: 177 VLTVLCTIGYLIPIFNNPVSAFYKALLANAATSALRLHQRIPAREIS 317
+L ++C GY + +FN K LL A S + Q +P R ++
Sbjct: 814 LLLLICNSGYKVKLFNATTKMCRKTLLGPAYGSPIEQTQVLPVRSMA 860
>AB065753-1|BAC05973.1| 298|Homo sapiens seven transmembrane helix
receptor protein.
Length = 298
Score = 29.5 bits (63), Expect = 8.0
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Frame = +3
Query: 348 LEDSAHYLFYSLIFMNVAPNLLVLTPIFLFALLHAASY----SLTILDTLGQNSMWVARL 515
LE + +LF S + N+L+LT I LH Y +L+I D LG +S V ++
Sbjct: 21 LETALLFLFSSFYLCTLLGNVLILTAIISSTRLHTPMYFFLGNLSIFD-LGFSSTTVPKM 79
Query: 516 LISL 527
L L
Sbjct: 80 LFYL 83
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,153,495
Number of Sequences: 237096
Number of extensions: 1803778
Number of successful extensions: 3493
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3355
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3483
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5308067764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -