Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_H23
         (542 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    27   0.093
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    26   0.29 
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   3.5  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   6.1  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   6.1  
AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-lik...    21   6.1  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   6.1  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           21   8.1  

>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 27.5 bits (58), Expect = 0.093
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +2

Query: 308 RNFNLQRVSCSIFLGGQRTLPVLLINLHERGTKF 409
           RNF + R SC + LG  + + V  INL   G  F
Sbjct: 167 RNFPMDRQSCPLILGSCKCIYVQSINLCMAGRLF 200


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 25.8 bits (54), Expect = 0.29
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +3

Query: 366 YLFYSLIFMNVAPNLLVLTPIF 431
           +LF  LIF++VA N+LV   I+
Sbjct: 30  FLFLILIFLSVAGNILVCVAIY 51


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 8/38 (21%), Positives = 19/38 (50%)
 Frame = +1

Query: 10  NCAITFSHSFLLVIYTYLQWLIRTLNLETQAHQRAYQH 123
           N A   SH+  LV++   +W++   ++  + ++    H
Sbjct: 689 NLAAEVSHTQRLVVHVPPRWIVEPTDVSVERNKHVALH 726


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +3

Query: 33  QFLVSYIYIFTMADQNPQSGDTGPPKGI 116
           QF+V  +Y F +A  N Q       KG+
Sbjct: 331 QFVVDAVYAFALALHNLQKDVCSKLKGL 358


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 11/33 (33%), Positives = 13/33 (39%)
 Frame = +1

Query: 256 WLTRLHQR*DYTSESLLEKFQSPESFLLDFSWR 354
           W+  L     Y   S L  F  P   +L F WR
Sbjct: 237 WICELTNDAGYVVYSALGSFYIPMLVMLFFYWR 269


>AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-like
           protein protein.
          Length = 130

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = -3

Query: 366 NVRCPPRKIEQETLWR 319
           N  CP  K+++  +WR
Sbjct: 100 NEMCPLEKLKERRIWR 115


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +3

Query: 33  QFLVSYIYIFTMADQNPQSGDTGPPKGI 116
           QF+V  +Y F +A  N Q       KG+
Sbjct: 421 QFVVDAVYAFALALHNLQKDVCSKLKGL 448


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 282 RLHQRIPAREISISR 326
           RLH R+P R  ++ R
Sbjct: 108 RLHSRLPGRNFNLLR 122


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,203
Number of Sequences: 438
Number of extensions: 3156
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15459066
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)