Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_H21
         (513 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    23   1.4  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    23   2.4  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    21   5.7  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   9.9  

>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -3

Query: 94  GETVPTIPHRWRRTAVMTAVMNAV 23
           G+ +PT+P+    T   T V N +
Sbjct: 224 GDAIPTVPYTETETETWTRVFNTL 247


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 12/49 (24%), Positives = 23/49 (46%)
 Frame = +2

Query: 128 VLVKRSRIKMQPPATAKRKRLRSRSFLTRNRPCVNITRNLETNAPTCNV 274
           +L K +R +   P+T++    RS     RN   +    +  ++A +C V
Sbjct: 339 ILTKGARARGNQPSTSECGEFRSVVVQKRNGSMIECNISPRSSADSCQV 387


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -2

Query: 140 FLRERRSSTDREYGFGRDGPDH 75
           FL ER     + Y FGRD  DH
Sbjct: 295 FLCERHQ---KRYFFGRDSVDH 313


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 271 VAGRSICLQVPSDVYAG 221
           VAGRS  + +P D+  G
Sbjct: 44  VAGRSESVVIPGDIVLG 60


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,747
Number of Sequences: 438
Number of extensions: 2389
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14232156
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)