Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_H18
         (528 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41547-6|AAA83197.1|  139|Caenorhabditis elegans Hypothetical pr...    31   0.67 
AF067611-3|AAC19179.1|  139|Caenorhabditis elegans Hypothetical ...    31   0.67 
AF067611-4|AAC19181.1|  139|Caenorhabditis elegans Hypothetical ...    29   1.6  
U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical pr...    29   2.1  
Z81508-1|CAB04142.1|  331|Caenorhabditis elegans Hypothetical pr...    28   3.6  

>U41547-6|AAA83197.1|  139|Caenorhabditis elegans Hypothetical
           protein F22A3.6a protein.
          Length = 139

 Score = 30.7 bits (66), Expect = 0.67
 Identities = 23/75 (30%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
 Frame = +2

Query: 14  CLVENESGRFTDKIGKVNKNGSRDYGLFQINDKYWCSTGSTPGKDCHVT--CNQLLTDDI 187
           C+   ESG     IG     GS   G +QI   Y+   G    K    T    +   DD+
Sbjct: 23  CICMRESG--CKPIGCHMDVGSLSCGYYQIKIGYYEDCGQPTKKAGETTEAAWKRCADDL 80

Query: 188 SVAATCAKKIYKRHK 232
           + A TC +  Y R+K
Sbjct: 81  NCATTCVENYYNRYK 95


>AF067611-3|AAC19179.1|  139|Caenorhabditis elegans Hypothetical
           protein C45G7.3 protein.
          Length = 139

 Score = 30.7 bits (66), Expect = 0.67
 Identities = 23/75 (30%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
 Frame = +2

Query: 14  CLVENESGRFTDKIGKVNKNGSRDYGLFQINDKYWCSTGSTPGKDCHVT--CNQLLTDDI 187
           C+   ESG     IG     GS   G +QI   Y+   G    K    T    +   +D+
Sbjct: 23  CICMRESG--CKPIGCNMDVGSLSCGYYQIKLPYYEDCGQPTKKSGETTEAAWKRCANDL 80

Query: 188 SVAATCAKKIYKRHK 232
           S A TC +  Y R+K
Sbjct: 81  SCATTCVENYYNRYK 95


>AF067611-4|AAC19181.1|  139|Caenorhabditis elegans Hypothetical
           protein C45G7.2 protein.
          Length = 139

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 4/79 (5%)
 Frame = +2

Query: 14  CLVENESGRFTDKIGKVNKNGSRDYGLFQINDKYWCSTGSTPGKDCHVTCNQLL----TD 181
           C+   ESG     IG     GS   G +QI   Y+   G  PGK  H    ++      D
Sbjct: 23  CICMRESG--CKPIGCHMDVGSLSCGYYQIKIPYYEDCGQ-PGKK-HGESTEVAWKRCAD 78

Query: 182 DISVAATCAKKIYKRHKFD 238
           D+  A  C +  Y R+K +
Sbjct: 79  DLKCATNCVENYYNRYKHE 97


>U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical protein
            W02C12.1 protein.
          Length = 1372

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +2

Query: 59   KVNKNGSRDYGLFQINDKYWCSTGSTPGKDCHVTC 163
            KV  NG  D G  +I ++Y C  G    +D  V C
Sbjct: 902  KVLPNGRPDVGSLKIKEEYLCQAGQVVVRDLCVPC 936


>Z81508-1|CAB04142.1|  331|Caenorhabditis elegans Hypothetical
           protein F20E11.1 protein.
          Length = 331

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -1

Query: 384 YPYKHFCFKLQLELVNFIRSCFMKFKAFSQQSL 286
           YP  HFC  +++  + F+ +CF    A S  SL
Sbjct: 62  YPTAHFCQMVKVSYLVFVSACFNFILAVSVNSL 94


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,130,143
Number of Sequences: 27780
Number of extensions: 246811
Number of successful extensions: 549
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 546
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 549
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1038911524
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)