Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_H17
(348 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64854-5|AAB18317.1| 422|Caenorhabditis elegans Hypothetical pr... 91 2e-19
U03059-1|AAA88795.1| 422|Caenorhabditis elegans ornithine decar... 91 2e-19
U97191-5|AAB52428.1| 477|Caenorhabditis elegans Hypothetical pr... 49 1e-06
AY081955-1|AAL92523.1| 788|Caenorhabditis elegans MAT-1 protein. 31 0.23
AC006708-13|AAF60415.1| 788|Caenorhabditis elegans Metaphase-to... 31 0.23
AC024877-4|ABQ13047.1| 697|Caenorhabditis elegans Phosphodieste... 30 0.40
AC024877-3|AAF60898.1| 760|Caenorhabditis elegans Phosphodieste... 30 0.40
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 29 0.91
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 29 0.91
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 29 0.91
Z98866-14|CAB11553.1| 524|Caenorhabditis elegans Hypothetical p... 29 1.2
U13875-10|AAA21159.1| 332|Caenorhabditis elegans F-box synaptic... 28 1.6
AC024817-24|AAF59584.3| 237|Caenorhabditis elegans C-type lecti... 28 2.1
Z82272-6|CAB05222.1| 1431|Caenorhabditis elegans Hypothetical pr... 27 2.8
U80847-7|AAO91744.1| 778|Caenorhabditis elegans Hypothetical pr... 27 2.8
U64843-1|AAF98232.1| 1067|Caenorhabditis elegans Hypothetical pr... 27 2.8
AL033536-3|CAA22142.1| 1564|Caenorhabditis elegans Hypothetical ... 27 2.8
Z93391-7|CAB07685.3| 405|Caenorhabditis elegans Hypothetical pr... 27 3.7
Z70207-1|CAA94128.1| 291|Caenorhabditis elegans Hypothetical pr... 27 3.7
U40954-6|ABQ13043.1| 127|Caenorhabditis elegans Hypothetical pr... 27 3.7
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 27 3.7
AF101310-1|AAC69216.2| 765|Caenorhabditis elegans Hypothetical ... 27 3.7
AF003146-3|AAB54203.2| 252|Caenorhabditis elegans Abc transport... 27 3.7
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 27 4.9
D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein. 27 4.9
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 27 4.9
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 27 4.9
Z82089-1|CAB05002.1| 983|Caenorhabditis elegans Hypothetical pr... 26 6.4
Z81511-2|CAB04167.1| 983|Caenorhabditis elegans Hypothetical pr... 26 6.4
Z71178-2|CAA94875.1| 297|Caenorhabditis elegans Hypothetical pr... 26 6.4
U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical pr... 26 6.4
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 26 6.4
AF038615-4|AAB94143.1| 743|Caenorhabditis elegans Hypothetical ... 26 6.4
AC024838-8|AAF60822.1| 234|Caenorhabditis elegans Thaumatin fam... 26 6.4
Z92847-6|CAB07423.1| 1076|Caenorhabditis elegans Hypothetical pr... 26 8.5
Z73911-9|CAA98143.1| 1076|Caenorhabditis elegans Hypothetical pr... 26 8.5
U36199-1|AAA79337.1| 340|Caenorhabditis elegans CeMEF-2 protein. 26 8.5
U36198-1|AAA79336.1| 340|Caenorhabditis elegans CeMef-2 protein. 26 8.5
U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein (sp... 26 8.5
U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein (sp... 26 8.5
U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (spl... 26 8.5
L14710-6|AAA28079.1| 227|Caenorhabditis elegans Hypothetical pr... 26 8.5
AL023828-13|CAA19457.2| 419|Caenorhabditis elegans Hypothetical... 26 8.5
>U64854-5|AAB18317.1| 422|Caenorhabditis elegans Hypothetical
protein K11C4.4 protein.
Length = 422
Score = 91.5 bits (217), Expect = 2e-19
Identities = 38/94 (40%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Frame = +3
Query: 3 SFNCILYDHQHVVAEPL-NVSCERSSPCSVWGPTCDGLDCVVAATRLPAMSLAEWVVWRD 179
SFNCIL+DH H + PL + ++WGPTCD LD V +P M++ EW+ + D
Sbjct: 325 SFNCILFDHAHPIGSPLFDTDRNEKFMSTIWGPTCDSLDLVEDKKLMPKMNVGEWLYYPD 384
Query: 180 MGAYTMPVASTFNGFPVPGVRAYVDSRLWSMLKE 281
MGAYT+ A+TFNGF P + +W +++
Sbjct: 385 MGAYTLAAATTFNGFSKPVPMYVMSEEMWESIRD 418
>U03059-1|AAA88795.1| 422|Caenorhabditis elegans ornithine
decarboxylase protein.
Length = 422
Score = 91.5 bits (217), Expect = 2e-19
Identities = 38/94 (40%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Frame = +3
Query: 3 SFNCILYDHQHVVAEPL-NVSCERSSPCSVWGPTCDGLDCVVAATRLPAMSLAEWVVWRD 179
SFNCIL+DH H + PL + ++WGPTCD LD V +P M++ EW+ + D
Sbjct: 325 SFNCILFDHAHPIGSPLFDTDRNEKFMSTIWGPTCDSLDLVEDKKLMPKMNVGEWLYYPD 384
Query: 180 MGAYTMPVASTFNGFPVPGVRAYVDSRLWSMLKE 281
MGAYT+ A+TFNGF P + +W +++
Sbjct: 385 MGAYTLAAATTFNGFSKPVPMYVMSEEMWESIRD 418
>U97191-5|AAB52428.1| 477|Caenorhabditis elegans Hypothetical
protein F53F10.2a protein.
Length = 477
Score = 48.8 bits (111), Expect = 1e-06
Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Frame = +3
Query: 3 SFNCILYDHQHVVAEPLNVSCERSSPC---SVWGPTCDGLDCVVAATRLPAMSLAEWVVW 173
SF C D + + +PL+V + ++ GPT DG D + + + EW+VW
Sbjct: 336 SFGCKQMDIKPL-CKPLDVENDSEEQLHFGTILGPTLDGTDVAQRLMKSRQLRVGEWLVW 394
Query: 174 RDMGAYTMPVASTFNGFPVPGVRAYVDSRLWSML 275
MGA+T+PV S + VP V Y W L
Sbjct: 395 EQMGAFTIPVDSEHS---VPPVYYYSGKECWQKL 425
>AY081955-1|AAL92523.1| 788|Caenorhabditis elegans MAT-1 protein.
Length = 788
Score = 31.1 bits (67), Expect = 0.23
Identities = 26/82 (31%), Positives = 37/82 (45%)
Frame = -3
Query: 331 RNSCESTTSPASRSGRNSFSIDQSRESTYALTPGTGNPLKVDATGIVYAPMSRHTTHSAS 152
R S T + A+R RN+ S R+ST TP NP + + +R T S
Sbjct: 237 RRSTRGTIASANRETRNTTSNITPRQSTPGSTPSRINPTAPRKSSRISEMTTRRT---ES 293
Query: 151 DIAGSRVAATTQSSPSQVGPHT 86
+ GSR + T+ P + PHT
Sbjct: 294 SVTGSRSSLFTE--PER--PHT 311
>AC006708-13|AAF60415.1| 788|Caenorhabditis elegans
Metaphase-to-anaphase transitiondefect protein 1,
isoform a protein.
Length = 788
Score = 31.1 bits (67), Expect = 0.23
Identities = 26/82 (31%), Positives = 37/82 (45%)
Frame = -3
Query: 331 RNSCESTTSPASRSGRNSFSIDQSRESTYALTPGTGNPLKVDATGIVYAPMSRHTTHSAS 152
R S T + A+R RN+ S R+ST TP NP + + +R T S
Sbjct: 237 RRSTRGTIASANRETRNTTSNITPRQSTPGSTPSRINPTAPRKSSRISEMTTRRT---ES 293
Query: 151 DIAGSRVAATTQSSPSQVGPHT 86
+ GSR + T+ P + PHT
Sbjct: 294 SVTGSRSSLFTE--PER--PHT 311
>AC024877-4|ABQ13047.1| 697|Caenorhabditis elegans
Phosphodiesterase protein 6, isoformb protein.
Length = 697
Score = 30.3 bits (65), Expect = 0.40
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -1
Query: 339 SNRGTRANRQPARRRGADATPSASTRAVSR 250
S G R PA RRGA P+A+ A SR
Sbjct: 23 SQAGRRQQHTPAARRGAQRAPAATAAAASR 52
>AC024877-3|AAF60898.1| 760|Caenorhabditis elegans
Phosphodiesterase protein 6, isoforma protein.
Length = 760
Score = 30.3 bits (65), Expect = 0.40
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -1
Query: 339 SNRGTRANRQPARRRGADATPSASTRAVSR 250
S G R PA RRGA P+A+ A SR
Sbjct: 23 SQAGRRQQHTPAARRGAQRAPAATAAAASR 52
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
protein K07E12.1b protein.
Length = 12268
Score = 29.1 bits (62), Expect = 0.91
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -3
Query: 304 PASRSGRNSFSIDQSRESTYALTPGTGNPLKVDATG 197
P S + + D+S Y +T G PL D+TG
Sbjct: 4074 PTSETATKALPTDESGNVIYPITKADGTPLATDSTG 4109
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 268 DQSRESTYALTPGTGNPLKVDATGIVYAP 182
D+S ++ Y + GNPL DA+G V P
Sbjct: 3868 DESGKTVYPVRRPDGNPLPTDASGAVIGP 3896
Score = 27.1 bits (57), Expect = 3.7
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -3
Query: 298 SRSGRNSFSIDQSRESTYALTPGTGNPLKVDATG 197
S + + ID+S Y +T G PL D+TG
Sbjct: 2784 SETPTKTLPIDESGNVVYPITKPDGTPLATDSTG 2817
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = -3
Query: 304 PASRSGRNSFSIDQSRESTYALTPGTGNPLKVDATG 197
P+ ID S Y +T G PL D+TG
Sbjct: 2927 PSDEETSKELPIDDSGNVIYPITKPDGTPLATDSTG 2962
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = -3
Query: 304 PASRSGRNSFSIDQSRESTYALTPGTGNPLKVDATG 197
P+ S D+S Y +T G PL D+TG
Sbjct: 3929 PSDEVTAKELSTDESGTIVYPVTRADGTPLATDSTG 3964
Score = 26.6 bits (56), Expect = 4.9
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -3
Query: 268 DQSRESTYALTPGTGNPLKVDATGIVYAP 182
D+S ++ Y + G PL DA+G V +P
Sbjct: 4388 DESGKTVYPVRGPDGTPLPTDASGAVISP 4416
Score = 26.6 bits (56), Expect = 4.9
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 268 DQSRESTYALTPGTGNPLKVDATGIVYAP 182
D+S ++ Y + G PL DA+G V P
Sbjct: 5398 DESGKTVYPIRGPDGTPLPTDASGAVIGP 5426
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = -3
Query: 304 PASRSGRNSFSIDQSRESTYALTPGTGNPLKVDATG 197
P+ S D+S Y +T G PL DA+G
Sbjct: 7836 PSDESAAKVLPTDESGSVVYPITKPDGTPLGTDASG 7871
Score = 26.2 bits (55), Expect = 6.4
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = -3
Query: 304 PASRSGRNSFSIDQSRESTYALTPGTGNPLKVDATG 197
P++ + D+S Y +T G PL D+TG
Sbjct: 6100 PSNEETTQGLTTDESVNVIYPITKPDGTPLATDSTG 6135
Score = 26.2 bits (55), Expect = 6.4
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 268 DQSRESTYALTPGTGNPLKVDATGIVYAP 182
D+S ++ Y + G PL DA+G V P
Sbjct: 6329 DESEKTPYPVHGPDGTPLPTDASGAVIGP 6357
Score = 26.2 bits (55), Expect = 6.4
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 268 DQSRESTYALTPGTGNPLKVDATGIVYAP 182
D+S ++ Y + G PL DA+G V P
Sbjct: 7775 DESGKTVYPVRGPDGTPLPTDASGAVIGP 7803
Score = 26.2 bits (55), Expect = 6.4
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 268 DQSRESTYALTPGTGNPLKVDATGIVYAP 182
D+S ++ Y + G PL DA+G V P
Sbjct: 8549 DESGKTVYPVRGPDGTPLPTDASGAVIGP 8577
Score = 25.8 bits (54), Expect = 8.5
Identities = 13/41 (31%), Positives = 16/41 (39%)
Frame = -3
Query: 304 PASRSGRNSFSIDQSRESTYALTPGTGNPLKVDATGIVYAP 182
PA+ S D S + Y + G PL D TG P
Sbjct: 3137 PATTSDGEVIPTDDSGKPLYTIRGPDGTPLPTDETGSALGP 3177
Score = 25.8 bits (54), Expect = 8.5
Identities = 9/36 (25%), Positives = 18/36 (50%)
Frame = -3
Query: 304 PASRSGRNSFSIDQSRESTYALTPGTGNPLKVDATG 197
P+ + D++ ++ + +T G PL D+TG
Sbjct: 4304 PSDEGATKTHPTDETSDAVHPITKPDGTPLATDSTG 4339
Score = 25.8 bits (54), Expect = 8.5
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 268 DQSRESTYALTPGTGNPLKVDATGIVYAP 182
D+S ++ Y + G PL DA+G V P
Sbjct: 6039 DESGKTIYPVRGPDGTPLPTDASGAVIGP 6067
Score = 25.8 bits (54), Expect = 8.5
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -3
Query: 277 FSIDQSRESTYALTPGTGNPLKVDATG 197
F+ D++ E +++T G PL D+TG
Sbjct: 7216 FTSDKTPEVIHSITKPDGTPLSTDSTG 7242
Score = 25.8 bits (54), Expect = 8.5
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -3
Query: 277 FSIDQSRESTYALTPGTGNPLKVDATG 197
F+ D++ E +++T G PL D+TG
Sbjct: 9753 FTSDKTPEVIHSITKPDGTPLSTDSTG 9779
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -3
Query: 304 PASRSGRNSFSIDQSRESTYALTPGTGNPLKVDATG 197
P S +F D+S Y +T G PL D++G
Sbjct: 10661 PVDDSTIKAFPTDESGNVAYPITRPDGTPLGTDSSG 10696
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical
protein K07E12.1a protein.
Length = 13100
Score = 29.1 bits (62), Expect = 0.91
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -3
Query: 304 PASRSGRNSFSIDQSRESTYALTPGTGNPLKVDATG 197
P S + + D+S Y +T G PL D+TG
Sbjct: 4119 PTSETATKALPTDESGNVIYPITKADGTPLATDSTG 4154
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 268 DQSRESTYALTPGTGNPLKVDATGIVYAP 182
D+S ++ Y + GNPL DA+G V P
Sbjct: 3913 DESGKTVYPVRRPDGNPLPTDASGAVIGP 3941
Score = 27.1 bits (57), Expect = 3.7
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -3
Query: 298 SRSGRNSFSIDQSRESTYALTPGTGNPLKVDATG 197
S + + ID+S Y +T G PL D+TG
Sbjct: 2829 SETPTKTLPIDESGNVVYPITKPDGTPLATDSTG 2862
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = -3
Query: 304 PASRSGRNSFSIDQSRESTYALTPGTGNPLKVDATG 197
P+ ID S Y +T G PL D+TG
Sbjct: 2972 PSDEETSKELPIDDSGNVIYPITKPDGTPLATDSTG 3007
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = -3
Query: 304 PASRSGRNSFSIDQSRESTYALTPGTGNPLKVDATG 197
P+ S D+S Y +T G PL D+TG
Sbjct: 3974 PSDEVTAKELSTDESGTIVYPVTRADGTPLATDSTG 4009
Score = 26.6 bits (56), Expect = 4.9
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -3
Query: 268 DQSRESTYALTPGTGNPLKVDATGIVYAP 182
D+S ++ Y + G PL DA+G V +P
Sbjct: 4433 DESGKTVYPVRGPDGTPLPTDASGAVISP 4461
Score = 26.6 bits (56), Expect = 4.9
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 268 DQSRESTYALTPGTGNPLKVDATGIVYAP 182
D+S ++ Y + G PL DA+G V P
Sbjct: 5443 DESGKTVYPIRGPDGTPLPTDASGAVIGP 5471
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = -3
Query: 304 PASRSGRNSFSIDQSRESTYALTPGTGNPLKVDATG 197
P+ S D+S Y +T G PL DA+G
Sbjct: 7881 PSDESAAKVLPTDESGSVVYPITKPDGTPLGTDASG 7916
Score = 26.2 bits (55), Expect = 6.4
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = -3
Query: 304 PASRSGRNSFSIDQSRESTYALTPGTGNPLKVDATG 197
P++ + D+S Y +T G PL D+TG
Sbjct: 6145 PSNEETTQGLTTDESVNVIYPITKPDGTPLATDSTG 6180
Score = 26.2 bits (55), Expect = 6.4
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 268 DQSRESTYALTPGTGNPLKVDATGIVYAP 182
D+S ++ Y + G PL DA+G V P
Sbjct: 6374 DESEKTPYPVHGPDGTPLPTDASGAVIGP 6402
Score = 26.2 bits (55), Expect = 6.4
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 268 DQSRESTYALTPGTGNPLKVDATGIVYAP 182
D+S ++ Y + G PL DA+G V P
Sbjct: 7820 DESGKTVYPVRGPDGTPLPTDASGAVIGP 7848
Score = 26.2 bits (55), Expect = 6.4
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 268 DQSRESTYALTPGTGNPLKVDATGIVYAP 182
D+S ++ Y + G PL DA+G V P
Sbjct: 8594 DESGKTVYPVRGPDGTPLPTDASGAVIGP 8622
Score = 25.8 bits (54), Expect = 8.5
Identities = 13/41 (31%), Positives = 16/41 (39%)
Frame = -3
Query: 304 PASRSGRNSFSIDQSRESTYALTPGTGNPLKVDATGIVYAP 182
PA+ S D S + Y + G PL D TG P
Sbjct: 3182 PATTSDGEVIPTDDSGKPLYTIRGPDGTPLPTDETGSALGP 3222
Score = 25.8 bits (54), Expect = 8.5
Identities = 9/36 (25%), Positives = 18/36 (50%)
Frame = -3
Query: 304 PASRSGRNSFSIDQSRESTYALTPGTGNPLKVDATG 197
P+ + D++ ++ + +T G PL D+TG
Sbjct: 4349 PSDEGATKTHPTDETSDAVHPITKPDGTPLATDSTG 4384
Score = 25.8 bits (54), Expect = 8.5
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 268 DQSRESTYALTPGTGNPLKVDATGIVYAP 182
D+S ++ Y + G PL DA+G V P
Sbjct: 6084 DESGKTIYPVRGPDGTPLPTDASGAVIGP 6112
Score = 25.8 bits (54), Expect = 8.5
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -3
Query: 277 FSIDQSRESTYALTPGTGNPLKVDATG 197
F+ D++ E +++T G PL D+TG
Sbjct: 7261 FTSDKTPEVIHSITKPDGTPLSTDSTG 7287
Score = 25.8 bits (54), Expect = 8.5
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -3
Query: 277 FSIDQSRESTYALTPGTGNPLKVDATG 197
F+ D++ E +++T G PL D+TG
Sbjct: 9798 FTSDKTPEVIHSITKPDGTPLSTDSTG 9824
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -3
Query: 304 PASRSGRNSFSIDQSRESTYALTPGTGNPLKVDATG 197
P S +F D+S Y +T G PL D++G
Sbjct: 10706 PVDDSTIKAFPTDESGNVAYPITRPDGTPLGTDSSG 10741
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin
protein.
Length = 13100
Score = 29.1 bits (62), Expect = 0.91
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -3
Query: 304 PASRSGRNSFSIDQSRESTYALTPGTGNPLKVDATG 197
P S + + D+S Y +T G PL D+TG
Sbjct: 4119 PTSETATKALPTDESGNVIYPITKADGTPLATDSTG 4154
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 268 DQSRESTYALTPGTGNPLKVDATGIVYAP 182
D+S ++ Y + GNPL DA+G V P
Sbjct: 3913 DESGKTVYPVRRPDGNPLPTDASGAVIGP 3941
Score = 27.1 bits (57), Expect = 3.7
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -3
Query: 298 SRSGRNSFSIDQSRESTYALTPGTGNPLKVDATG 197
S + + ID+S Y +T G PL D+TG
Sbjct: 2829 SETPTKTLPIDESGNVVYPITKPDGTPLATDSTG 2862
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = -3
Query: 304 PASRSGRNSFSIDQSRESTYALTPGTGNPLKVDATG 197
P+ ID S Y +T G PL D+TG
Sbjct: 2972 PSDEETSKELPIDDSGNVIYPITKPDGTPLATDSTG 3007
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = -3
Query: 304 PASRSGRNSFSIDQSRESTYALTPGTGNPLKVDATG 197
P+ S D+S Y +T G PL D+TG
Sbjct: 3974 PSDEVTAKELSTDESGTIVYPVTRADGTPLATDSTG 4009
Score = 26.6 bits (56), Expect = 4.9
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -3
Query: 268 DQSRESTYALTPGTGNPLKVDATGIVYAP 182
D+S ++ Y + G PL DA+G V +P
Sbjct: 4433 DESGKTVYPVRGPDGTPLPTDASGAVISP 4461
Score = 26.6 bits (56), Expect = 4.9
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 268 DQSRESTYALTPGTGNPLKVDATGIVYAP 182
D+S ++ Y + G PL DA+G V P
Sbjct: 5443 DESGKTVYPIRGPDGTPLPTDASGAVIGP 5471
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = -3
Query: 304 PASRSGRNSFSIDQSRESTYALTPGTGNPLKVDATG 197
P+ S D+S Y +T G PL DA+G
Sbjct: 7881 PSDESAAKVLPTDESGSVVYPITKPDGTPLGTDASG 7916
Score = 26.2 bits (55), Expect = 6.4
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = -3
Query: 304 PASRSGRNSFSIDQSRESTYALTPGTGNPLKVDATG 197
P++ + D+S Y +T G PL D+TG
Sbjct: 6145 PSNEETTQGLTTDESVNVIYPITKPDGTPLATDSTG 6180
Score = 26.2 bits (55), Expect = 6.4
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 268 DQSRESTYALTPGTGNPLKVDATGIVYAP 182
D+S ++ Y + G PL DA+G V P
Sbjct: 6374 DESEKTPYPVHGPDGTPLPTDASGAVIGP 6402
Score = 26.2 bits (55), Expect = 6.4
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 268 DQSRESTYALTPGTGNPLKVDATGIVYAP 182
D+S ++ Y + G PL DA+G V P
Sbjct: 7820 DESGKTVYPVRGPDGTPLPTDASGAVIGP 7848
Score = 26.2 bits (55), Expect = 6.4
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 268 DQSRESTYALTPGTGNPLKVDATGIVYAP 182
D+S ++ Y + G PL DA+G V P
Sbjct: 8594 DESGKTVYPVRGPDGTPLPTDASGAVIGP 8622
Score = 25.8 bits (54), Expect = 8.5
Identities = 13/41 (31%), Positives = 16/41 (39%)
Frame = -3
Query: 304 PASRSGRNSFSIDQSRESTYALTPGTGNPLKVDATGIVYAP 182
PA+ S D S + Y + G PL D TG P
Sbjct: 3182 PATTSDGEVIPTDDSGKPLYTIRGPDGTPLPTDETGSALGP 3222
Score = 25.8 bits (54), Expect = 8.5
Identities = 9/36 (25%), Positives = 18/36 (50%)
Frame = -3
Query: 304 PASRSGRNSFSIDQSRESTYALTPGTGNPLKVDATG 197
P+ + D++ ++ + +T G PL D+TG
Sbjct: 4349 PSDEGATKTHPTDETSDAVHPITKPDGTPLATDSTG 4384
Score = 25.8 bits (54), Expect = 8.5
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 268 DQSRESTYALTPGTGNPLKVDATGIVYAP 182
D+S ++ Y + G PL DA+G V P
Sbjct: 6084 DESGKTIYPVRGPDGTPLPTDASGAVIGP 6112
Score = 25.8 bits (54), Expect = 8.5
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -3
Query: 277 FSIDQSRESTYALTPGTGNPLKVDATG 197
F+ D++ E +++T G PL D+TG
Sbjct: 7261 FTSDKTPEVIHSITKPDGTPLSTDSTG 7287
Score = 25.8 bits (54), Expect = 8.5
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -3
Query: 277 FSIDQSRESTYALTPGTGNPLKVDATG 197
F+ D++ E +++T G PL D+TG
Sbjct: 9798 FTSDKTPEVIHSITKPDGTPLSTDSTG 9824
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -3
Query: 304 PASRSGRNSFSIDQSRESTYALTPGTGNPLKVDATG 197
P S +F D+S Y +T G PL D++G
Sbjct: 10706 PVDDSTIKAFPTDESGNVAYPITRPDGTPLGTDSSG 10741
>Z98866-14|CAB11553.1| 524|Caenorhabditis elegans Hypothetical
protein Y49E10.17 protein.
Length = 524
Score = 28.7 bits (61), Expect = 1.2
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 12/114 (10%)
Frame = -3
Query: 340 EQPRNSCESTTSPASRSGRNSFSIDQ------SRESTYALTPGTG--NPLKVDATGIVYA 185
E R S++S S NS SI Q S+ STY GTG + ++ ++T ++Y+
Sbjct: 8 ETSRGEHSSSSSFRSNLSSNSDSIQQQSSDSSSQRSTYTEVVGTGPLDAVQDNSTEMLYS 67
Query: 184 PMSRHTTHS--ASDIAGSRVAATT--QSSPSQVGPHTEHGDERSQLTFSGSATT 35
S S +S + S V+ T+ S+ S +G RS + +GS+++
Sbjct: 68 RRSAEDLRSEQSSKTSSSTVSCTSLGSSNISSSSRQPSNGSFRSSGSSNGSSSS 121
>U13875-10|AAA21159.1| 332|Caenorhabditis elegans F-box synaptic
protein protein 1 protein.
Length = 332
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -3
Query: 220 PLKVDATGIVYAPMSRHTTHSASDIAGSRVAATTQSSPSQVGPHT 86
P+K V +P R T+ D G+ + T SP Q+ PH+
Sbjct: 22 PMKSSGLEQVESPKERKTSMVECDDEGNPSSGTPDESPKQLTPHS 66
>AC024817-24|AAF59584.3| 237|Caenorhabditis elegans C-type lectin
protein 83 protein.
Length = 237
Score = 27.9 bits (59), Expect = 2.1
Identities = 22/89 (24%), Positives = 36/89 (40%), Gaps = 4/89 (4%)
Frame = -3
Query: 334 PRNSCESTTSPA-SRSGRNSFSIDQSRESTYALTPGTGN---PLKVDATGIVYAPMSRHT 167
P N ++T+P S +S S +T + T G G+ P D+T Y P
Sbjct: 147 PNNVNPASTTPTYSTDASSSTYAPYSTYATDSSTAGYGSSATPYSTDSTTNTYGPTDSSA 206
Query: 166 THSASDIAGSRVAATTQSSPSQVGPHTEH 80
+ +D + S + +SP G T +
Sbjct: 207 SPYPTDSSTSSYPTDSSTSPYSTGSTTSY 235
>Z82272-6|CAB05222.1| 1431|Caenorhabditis elegans Hypothetical protein
F55G11.9 protein.
Length = 1431
Score = 27.5 bits (58), Expect = 2.8
Identities = 10/40 (25%), Positives = 17/40 (42%)
Frame = +3
Query: 225 PVPGVRAYVDSRLWSMLKELRPLRDAGLVVDSHEFRGCSA 344
P G+ +W ++ E+R +V+ SH C A
Sbjct: 1279 PTAGIDPRARREIWDIIHEMREQAKCSIVLTSHSMEECEA 1318
>U80847-7|AAO91744.1| 778|Caenorhabditis elegans Hypothetical
protein C17H11.6c protein.
Length = 778
Score = 27.5 bits (58), Expect = 2.8
Identities = 23/92 (25%), Positives = 39/92 (42%)
Frame = -3
Query: 319 ESTTSPASRSGRNSFSIDQSRESTYALTPGTGNPLKVDATGIVYAPMSRHTTHSASDIAG 140
E +T P+S+ R+ +T+ + TGN + + P +A AG
Sbjct: 668 EPSTRPSSKLRRSGSGKSVHTVATFPVNLNTGNTVNRQGLSNLSKPEIVQNMSNAPSEAG 727
Query: 139 SRVAATTQSSPSQVGPHTEHGDERSQLTFSGS 44
VAA SP+++ + E+ + S T S S
Sbjct: 728 ITVAA--PRSPTELEANGENAGDDSVSTSSSS 757
>U64843-1|AAF98232.1| 1067|Caenorhabditis elegans Hypothetical
protein K06C4.15 protein.
Length = 1067
Score = 27.5 bits (58), Expect = 2.8
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -3
Query: 256 ESTYALTPGTGNPLKVDATGIVYAPMSRHTTHSASDIAGS 137
+S ALT K++ GI P + HTT SA D+ S
Sbjct: 696 DSNQALTLQVEQQWKLENIGIEAQPWNDHTTTSAKDLQAS 735
>AL033536-3|CAA22142.1| 1564|Caenorhabditis elegans Hypothetical
protein Y53C10A.9 protein.
Length = 1564
Score = 27.5 bits (58), Expect = 2.8
Identities = 10/40 (25%), Positives = 17/40 (42%)
Frame = +3
Query: 225 PVPGVRAYVDSRLWSMLKELRPLRDAGLVVDSHEFRGCSA 344
P G+ +W ++ E+R +V+ SH C A
Sbjct: 1400 PTAGIDPRARREIWDIIHEMREQAKCSIVLTSHSMEECEA 1439
>Z93391-7|CAB07685.3| 405|Caenorhabditis elegans Hypothetical
protein W04G5.9 protein.
Length = 405
Score = 27.1 bits (57), Expect = 3.7
Identities = 20/87 (22%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Frame = -3
Query: 334 PRNSCESTTSPASRSGRNSFSIDQSRESTYAL--TPGTGNPLK-VDATGIVYAPMSRHTT 164
P ++ ++TT P + R++ I ++ ST P + + + T +P + T
Sbjct: 103 PPSTLKTTTKPVITATRSTARITTTKASTLEPPEAPTKASTARTISTTETTTSPPTTTVT 162
Query: 163 HSASDIAGSRVAATTQSSPSQVGPHTE 83
+ + +R ATT++SPS + T+
Sbjct: 163 PRTTRSSTARTVATTKTSPSTLRTTTK 189
>Z70207-1|CAA94128.1| 291|Caenorhabditis elegans Hypothetical
protein F15A2.1 protein.
Length = 291
Score = 27.1 bits (57), Expect = 3.7
Identities = 21/63 (33%), Positives = 25/63 (39%)
Frame = -2
Query: 317 IDNQPGVAERTQLLQHRPEP*VDVCPDTGHREPVEGGRDGHRVRAHVAPHHPLGE*HRRQ 138
+D +PGV ++ H E CP P G G VR P P G H Q
Sbjct: 122 VDGKPGVDGKSLTYVHAAEADCIPCPGGEAGPPGPDGEPG--VRGPNGPPGPNG--HPGQ 177
Query: 137 PGR 129
PGR
Sbjct: 178 PGR 180
>U40954-6|ABQ13043.1| 127|Caenorhabditis elegans Hypothetical
protein ZK813.7 protein.
Length = 127
Score = 27.1 bits (57), Expect = 3.7
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = -3
Query: 265 QSRESTYALTPGTGNPLKVDATGIVYAPMSRHTTHSASD 149
+SRES T NPL TG + P R ++HS SD
Sbjct: 78 ESRESRERRKNNTPNPLNQQPTGNGFVP--RRSSHSNSD 114
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 27.1 bits (57), Expect = 3.7
Identities = 13/39 (33%), Positives = 14/39 (35%), Gaps = 1/39 (2%)
Frame = -2
Query: 230 HREPVEGGRDGHRVRAHVAPHH-PLGE*HRRQPGRGHHA 117
H P G G H HH P H G GHH+
Sbjct: 413 HHSPAHHGEHGTHHGHHGEHHHAPAHHGHHESHGHGHHS 451
>AF101310-1|AAC69216.2| 765|Caenorhabditis elegans Hypothetical
protein C39F7.2 protein.
Length = 765
Score = 27.1 bits (57), Expect = 3.7
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +1
Query: 229 CPVSGHTSTHGSGRC*RSCVRSATPGWLSIRTSSAVAP 342
C + H + SG S R +TPG LS SSA +P
Sbjct: 30 CALKAHQPSTSSGSSSTSSPRPSTPGILSQILSSASSP 67
>AF003146-3|AAB54203.2| 252|Caenorhabditis elegans Abc transporter
family protein 6 protein.
Length = 252
Score = 27.1 bits (57), Expect = 3.7
Identities = 10/40 (25%), Positives = 17/40 (42%)
Frame = +3
Query: 225 PVPGVRAYVDSRLWSMLKELRPLRDAGLVVDSHEFRGCSA 344
P G+ +W ++ E+R +V+ SH C A
Sbjct: 105 PTAGIDPRARREIWDIIHEMREQGKCSIVLTSHSMEECEA 144
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 26.6 bits (56), Expect = 4.9
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = -3
Query: 274 SIDQSRESTYALTPGTGNPLKVDATGIVYAPMSRHTTHSASDIAGSRVAATTQSSPSQV 98
+ID+S E T+ + P + N GI++ ++ T H A + RV T + QV
Sbjct: 3329 AIDKSGEFTFKIRPTSDN-------GIIFIATNKRTDHIAVMLEHGRVVFTYDTGSGQV 3380
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 26.6 bits (56), Expect = 4.9
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = -3
Query: 274 SIDQSRESTYALTPGTGNPLKVDATGIVYAPMSRHTTHSASDIAGSRVAATTQSSPSQV 98
+ID+S E T+ + P + N GI++ ++ T H A + RV T + QV
Sbjct: 3361 AIDKSGEFTFKIRPTSDN-------GIIFIATNKRTDHIAVMLEHGRVVFTYDTGSGQV 3412
>D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein.
Length = 1518
Score = 26.6 bits (56), Expect = 4.9
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = -3
Query: 274 SIDQSRESTYALTPGTGNPLKVDATGIVYAPMSRHTTHSASDIAGSRVAATTQSSPSQV 98
+ID+S E T+ + P + N GI++ ++ T H A + RV T + QV
Sbjct: 1175 AIDKSGEFTFKIRPTSDN-------GIIFIATNKRTDHIAVMLEHGRVVFTYDTGSGQV 1226
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 26.6 bits (56), Expect = 4.9
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = -3
Query: 274 SIDQSRESTYALTPGTGNPLKVDATGIVYAPMSRHTTHSASDIAGSRVAATTQSSPSQV 98
+ID+S E T+ + P + N GI++ ++ T H A + RV T + QV
Sbjct: 3361 AIDKSGEFTFKIRPTSDN-------GIIFIATNKRTDHIAVMLEHGRVVFTYDTGSGQV 3412
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 26.6 bits (56), Expect = 4.9
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = -3
Query: 274 SIDQSRESTYALTPGTGNPLKVDATGIVYAPMSRHTTHSASDIAGSRVAATTQSSPSQV 98
+ID+S E T+ + P + N GI++ ++ T H A + RV T + QV
Sbjct: 3361 AIDKSGEFTFKIRPTSDN-------GIIFIATNKRTDHIAVMLEHGRVVFTYDTGSGQV 3412
>Z82089-1|CAB05002.1| 983|Caenorhabditis elegans Hypothetical
protein ZK270.1 protein.
Length = 983
Score = 26.2 bits (55), Expect = 6.4
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -2
Query: 188 RAHVAPHH-PLGE*HRRQPGRGHHAVQPVAS 99
R ++A HH PL RQP + H A QP+ S
Sbjct: 506 RVNIARHHRPL----TRQPSKFHEATQPIIS 532
>Z81511-2|CAB04167.1| 983|Caenorhabditis elegans Hypothetical
protein ZK270.1 protein.
Length = 983
Score = 26.2 bits (55), Expect = 6.4
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -2
Query: 188 RAHVAPHH-PLGE*HRRQPGRGHHAVQPVAS 99
R ++A HH PL RQP + H A QP+ S
Sbjct: 506 RVNIARHHRPL----TRQPSKFHEATQPIIS 532
>Z71178-2|CAA94875.1| 297|Caenorhabditis elegans Hypothetical
protein B0024.2 protein.
Length = 297
Score = 26.2 bits (55), Expect = 6.4
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +1
Query: 166 WCGATWARTRCPSRPPSTGSRCPVSGHTSTHGS 264
WC A+ RCP PP R G T GS
Sbjct: 93 WCQCEPAKPRCPRGPPGPPGR---PGQRGTSGS 122
>U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical
protein W02C12.1 protein.
Length = 1372
Score = 26.2 bits (55), Expect = 6.4
Identities = 12/42 (28%), Positives = 16/42 (38%)
Frame = +1
Query: 106 TGWTAWWPRPGCRRCHSPSGWCGATWARTRCPSRPPSTGSRC 231
TG + GC+ C + A +C P TG RC
Sbjct: 325 TGKGCEFKNTGCKTCENGGKCAEAAGGLQKCECSPGFTGERC 366
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 26.2 bits (55), Expect = 6.4
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = -3
Query: 325 SCESTTSPASRSGRNSFSIDQSRESTYALTPGTGNPLKVDATGIVYAPMSRHT-THSASD 149
S EST S S + S + S EST + + +G+ +++ + S T T S
Sbjct: 1177 STESTVSGGSSASIGSTNTPDSTESTISGSTISGSTGSTESSTMSAGTGSTETSTSGGST 1236
Query: 148 IAGSRVA-ATTQSSPS 104
++GS ++ ++T+SS S
Sbjct: 1237 VSGSSLSTSSTESSGS 1252
>AF038615-4|AAB94143.1| 743|Caenorhabditis elegans Hypothetical
protein R02D3.2 protein.
Length = 743
Score = 26.2 bits (55), Expect = 6.4
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +3
Query: 141 PAMSLAEWVVWRDMGAYTMPVASTFNG 221
P ++ AE +W DM YT V NG
Sbjct: 382 PPVAAAELSLWDDMTIYTNSVVDALNG 408
>AC024838-8|AAF60822.1| 234|Caenorhabditis elegans Thaumatin family
protein 6 protein.
Length = 234
Score = 26.2 bits (55), Expect = 6.4
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +1
Query: 163 GWCGATWARTRCPSRPPSTGSRC 231
GW G W RT C SR C
Sbjct: 60 GWEGVIWGRTLCDSRMRCATGTC 82
>Z92847-6|CAB07423.1| 1076|Caenorhabditis elegans Hypothetical
protein T12A7.5 protein.
Length = 1076
Score = 25.8 bits (54), Expect = 8.5
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +1
Query: 127 PRPGCRRCHSPSGWCGAT 180
P P RC SP+GW T
Sbjct: 395 PTPNLLRCQSPNGWSPIT 412
>Z73911-9|CAA98143.1| 1076|Caenorhabditis elegans Hypothetical
protein T12A7.5 protein.
Length = 1076
Score = 25.8 bits (54), Expect = 8.5
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +1
Query: 127 PRPGCRRCHSPSGWCGAT 180
P P RC SP+GW T
Sbjct: 395 PTPNLLRCQSPNGWSPIT 412
>U36199-1|AAA79337.1| 340|Caenorhabditis elegans CeMEF-2 protein.
Length = 340
Score = 25.8 bits (54), Expect = 8.5
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = +3
Query: 204 ASTFNGFPVPGVRAYVDSRLWSMLKELRPLRDAGLVVDSHEFRGCS 341
A+ +G VP RA D +WS + RP+ + + G S
Sbjct: 234 AADADGDLVPSSRAAADQNIWSSALQQRPVSQPAPSISNSSTNGIS 279
>U36198-1|AAA79336.1| 340|Caenorhabditis elegans CeMef-2 protein.
Length = 340
Score = 25.8 bits (54), Expect = 8.5
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = +3
Query: 204 ASTFNGFPVPGVRAYVDSRLWSMLKELRPLRDAGLVVDSHEFRGCS 341
A+ +G VP RA D +WS + RP+ + + G S
Sbjct: 234 AADADGDLVPSSRAAADQNIWSSALQQRPVSQPAPSISNSSTNGIS 279
>U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform b protein.
Length = 166
Score = 25.8 bits (54), Expect = 8.5
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = -1
Query: 345 RRSNRGTRANRQPARRRGADATPSASTRAVSRRMP*HRAP 226
RRS R +R P RRR S R+ SR R+P
Sbjct: 89 RRSRSPRRRSRTPPRRRSRSRDRKRSRRSRSRSSSRSRSP 128
>U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform d protein.
Length = 208
Score = 25.8 bits (54), Expect = 8.5
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = -1
Query: 345 RRSNRGTRANRQPARRRGADATPSASTRAVSRRMP*HRAP 226
RRS R +R P RRR S R+ SR R+P
Sbjct: 89 RRSRSPRRRSRTPPRRRSRSRDRKRSRRSRSRSSSRSRSP 128
>U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform a protein.
Length = 208
Score = 25.8 bits (54), Expect = 8.5
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = -1
Query: 345 RRSNRGTRANRQPARRRGADATPSASTRAVSRRMP*HRAP 226
RRS R +R P RRR S R+ SR R+P
Sbjct: 89 RRSRSPRRRSRTPPRRRSRSRDRKRSRRSRSRSSSRSRSP 128
>L14710-6|AAA28079.1| 227|Caenorhabditis elegans Hypothetical
protein K02D10.4 protein.
Length = 227
Score = 25.8 bits (54), Expect = 8.5
Identities = 19/81 (23%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = +3
Query: 57 VSCERSSPCSVWGPTCDGLDCVVAATRLPAMSLAEWVVWRDMGA--YTMPVASTFNGFPV 230
++ +RSSPC+ + + DC +++ + A S + V + D A + + + + V
Sbjct: 128 LTLKRSSPCATYELCDESCDCEQSSSSM-ASSPSSSVDFEDEDASNNNYKLQESIDAYAV 186
Query: 231 PGVRAYVDSRLWSMLKELRPL 293
+ A ++ RL S L+ L
Sbjct: 187 SSLNAIINQRLDSTADRLKTL 207
>AL023828-13|CAA19457.2| 419|Caenorhabditis elegans Hypothetical
protein Y17G7B.11 protein.
Length = 419
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/25 (48%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Frame = +1
Query: 199 PSRPP-STGSRCPVSGHTSTHGSGR 270
PS PP S G P S S HG+G+
Sbjct: 356 PSAPPASPGGEAPPSYEESVHGAGK 380
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,214,066
Number of Sequences: 27780
Number of extensions: 174603
Number of successful extensions: 954
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 750
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 952
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 461821634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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