Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_H17
         (348 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                22   2.4  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    21   4.2  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   5.5  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   5.5  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     20   7.3  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             20   7.3  

>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = -2

Query: 341 GATAELVRIDNQPGVAERTQLLQHRPEP*VDV 246
           GA  E+ +    PG      + Q+RP P  D+
Sbjct: 206 GAPNEIDKFYGTPGYTAPEVIKQNRPTPAADI 237


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -3

Query: 289 GRNSFSIDQSRESTYALTPGTGNPLKVD 206
           GRN    ++  E TYAL P  G  L +D
Sbjct: 347 GRNPTVQNKLYEETYALAP-AGCDLTID 373


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 20.6 bits (41), Expect = 5.5
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +2

Query: 218 RVPGARCQGIRRLTALVDAEGVAS 289
           ++ G RC+ + RLT  V    VA+
Sbjct: 203 QIHGYRCRTMHRLTRQVVVSSVAN 226


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 20.6 bits (41), Expect = 5.5
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +2

Query: 218 RVPGARCQGIRRLTALVDAEGVAS 289
           ++ G RC+ + RLT  V    VA+
Sbjct: 203 QIHGYRCRTMHRLTRQVVVSSVAN 226


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 20.2 bits (40), Expect = 7.3
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 86  RTRRRALTTHI*RFSDD 36
           +TRRRAL   + RF +D
Sbjct: 200 KTRRRALEHTLDRFHND 216


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.2 bits (40), Expect = 7.3
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -3

Query: 340 EQPRNSCESTTSPASRSGRNSFSI 269
           +QP  S +S +S +SRS  +  S+
Sbjct: 439 DQPPLSPQSDSSSSSRSAESPMSV 462


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,236
Number of Sequences: 438
Number of extensions: 1967
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  7936320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)