Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_H17
(348 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g11880.1 68418.m01390 diaminopimelate decarboxylase, putative... 37 0.004
At3g14390.1 68416.m01820 diaminopimelate decarboxylase, putative... 37 0.004
At5g40020.1 68418.m04853 pathogenesis-related thaumatin family p... 32 0.091
At4g38660.1 68417.m05473 thaumatin, putative similar to thaumati... 31 0.16
At1g77700.1 68414.m09047 pathogenesis-related thaumatin family p... 31 0.16
At1g75040.1 68414.m08716 pathogenesis-related protein 5 (PR-5) i... 31 0.28
At2g29210.1 68415.m03550 splicing factor PWI domain-containing p... 30 0.49
At1g20030.2 68414.m02508 pathogenesis-related thaumatin family p... 30 0.49
At1g20030.1 68414.m02509 pathogenesis-related thaumatin family p... 30 0.49
At3g10810.1 68416.m01301 zinc finger (C3HC4-type RING finger) fa... 29 0.85
At4g38670.1 68417.m05475 pathogenesis-related thaumatin family p... 29 1.1
At4g24180.1 68417.m03470 pathogenesis-related thaumatin family p... 29 1.1
At1g70250.1 68414.m08082 receptor serine/threonine kinase, putat... 29 1.1
At5g37010.1 68418.m04438 expressed protein 28 1.5
At2g18420.1 68415.m02145 gibberellin-responsive protein, putativ... 28 1.5
At1g75050.1 68414.m08717 thaumatin-like protein, putative / path... 28 1.5
At1g75030.1 68414.m08715 pathogenesis-related thaumatin family p... 28 1.5
At3g18770.1 68416.m02382 expressed protein 27 2.6
At5g19650.1 68418.m02338 ovate protein, putative 84% similar to ... 27 3.4
At4g03440.1 68417.m00471 ankyrin repeat family protein contains ... 27 3.4
At3g04610.1 68416.m00493 KH domain-containing protein similar pu... 27 3.4
At1g74440.1 68414.m08624 expressed protein similar to YGL010w-li... 27 3.4
At5g22880.1 68418.m02676 histone H2B, putative strong similarity... 27 4.5
At4g35760.1 68417.m05076 expressed protein 27 4.5
At4g25970.1 68417.m03737 phosphatidylserine decarboxylase, putat... 27 4.5
At1g74790.1 68414.m08665 expressed protein contains similarity t... 27 4.5
At5g49000.1 68418.m06062 kelch repeat-containing F-box family pr... 26 6.0
At5g02460.1 68418.m00173 Dof-type zinc finger domain-containing ... 26 6.0
At4g36970.1 68417.m05239 remorin family protein contains Pfam do... 26 6.0
At3g13330.1 68416.m01678 expressed protein 26 6.0
At2g40070.1 68415.m04923 expressed protein 26 6.0
At2g32940.1 68415.m04038 PAZ domain-containing protein / piwi do... 26 6.0
At1g78160.1 68414.m09108 pumilio/Puf RNA-binding domain-containi... 26 6.0
At1g76510.2 68414.m08903 ARID/BRIGHT DNA-binding domain-containi... 26 6.0
At1g76510.1 68414.m08902 ARID/BRIGHT DNA-binding domain-containi... 26 6.0
At5g51290.1 68418.m06358 ceramide kinase-related contains weak s... 26 7.9
At5g10720.1 68418.m01242 sensory transduction histidine kinase-r... 26 7.9
At4g31800.1 68417.m04517 WRKY family transcription factor 26 7.9
At3g63100.1 68416.m07087 glycine-rich protein 26 7.9
At3g05400.1 68416.m00590 sugar transporter, putative similar to ... 26 7.9
>At5g11880.1 68418.m01390 diaminopimelate decarboxylase, putative /
DAP carboxylase, putative similar to diaminopimelate
decarboxylase [Arabidopsis thaliana] GI:6562332;
contains Pfam profiles PF02784: Pyridoxal-dependent
decarboxylase pyridoxal binding domain, PF00278:
Pyridoxal-dependent decarboxylase C-terminal sheet
domain
Length = 489
Score = 36.7 bits (81), Expect = 0.004
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +3
Query: 18 LYD-HQHV-VAEPLNVSCERSSPCSVWGPTCDGLDCVVAATRLPAMSLAEWVVWRDMGAY 191
LYD +QH+ + P E + V GP C+ D + LP +V D GAY
Sbjct: 387 LYDAYQHIELVSPTPPEAEVTK-FDVVGPVCESADFLGKDRELPTPPQGAGLVVHDAGAY 445
Query: 192 TMPVASTFN 218
M +AST+N
Sbjct: 446 CMSMASTYN 454
>At3g14390.1 68416.m01820 diaminopimelate decarboxylase, putative /
DAP carboxylase, putative similar to diaminopimelate
decarboxylase [Arabidopsis thaliana] GI:6562332;
contains Pfam profiles PF02784: Pyridoxal-dependent
decarboxylase pyridoxal binding domain, PF00278:
Pyridoxal-dependent decarboxylase C-terminal sheet
domain
Length = 484
Score = 36.7 bits (81), Expect = 0.004
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +3
Query: 18 LYD-HQHV-VAEPLNVSCERSSPCSVWGPTCDGLDCVVAATRLPAMSLAEWVVWRDMGAY 191
LYD +QH+ + P E + V GP C+ D + LP +V D GAY
Sbjct: 382 LYDAYQHIELVSPPPAEAEVTK-FDVVGPVCESADFLGKDRELPTPPQGAGLVVHDAGAY 440
Query: 192 TMPVASTFN 218
M +AST+N
Sbjct: 441 CMSMASTYN 449
>At5g40020.1 68418.m04853 pathogenesis-related thaumatin family
protein similar to SP|P50699 Thaumatin-like protein
precursor {Arabidopsis thaliana}, pathogenesis-related
group 5 protein [Brassica rapa] GI:2749943; contains
Pfam profile PF00314: Thaumatin family
Length = 256
Score = 32.3 bits (70), Expect = 0.091
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 127 PRPGCRRCHSPSGWCGATWARTRC 198
P G +R +P GW G WART C
Sbjct: 61 PCGGIKRIDAPLGWSGRIWARTGC 84
>At4g38660.1 68417.m05473 thaumatin, putative similar to
thaumatin-like protein [Arabidopsis thaliana]
GI:2435406, thaumatin-like protein precursor [Pyrus
pyrifolia] GI:3241854; contains Pfam profile PF00314:
Thaumatin family
Length = 345
Score = 31.5 bits (68), Expect = 0.16
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 127 PRPGCRRCHSPSGWCGATWARTRCPSRPPSTGS 225
P+ R +P+GW G WART C +G+
Sbjct: 63 PKGTSRSLQAPTGWSGRFWARTGCKFDSSGSGT 95
Score = 26.6 bits (56), Expect = 4.5
Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = +1
Query: 106 TGWTA-WWPRPGCRRCHSPSGWC 171
TGW+ +W R GC+ S SG C
Sbjct: 74 TGWSGRFWARTGCKFDSSGSGTC 96
>At1g77700.1 68414.m09047 pathogenesis-related thaumatin family
protein similar to thaumatin-like protein [Arabidopsis
thaliana] GI:2435406; contains Pfam profile PF00314:
Thaumatin family
Length = 356
Score = 31.5 bits (68), Expect = 0.16
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +1
Query: 151 HSPSGWCGATWARTRCPSRPPSTGSRCPVSGHTST 255
H+P GW G W RT C TG+ C ST
Sbjct: 127 HAPVGWSGRIWGRTGCKFDSTGTGT-CETGSCGST 160
>At1g75040.1 68414.m08716 pathogenesis-related protein 5 (PR-5)
identical to SP|P28493 Pathogenesis-related protein 5
precursor (PR-5) {Arabidopsis thaliana}; contains Pfam
profile: PF00314 Thaumatin family
Length = 239
Score = 30.7 bits (66), Expect = 0.28
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +1
Query: 133 PGC-RRCHSPSGWCGATWARTRCPSRPPSTGSRC 231
PG R+ +P+GW G WART C + S RC
Sbjct: 57 PGASRQLTAPAGWSGRFWARTGC-NFDASGNGRC 89
>At2g29210.1 68415.m03550 splicing factor PWI domain-containing
protein contains Pfam profile PF01480: PWI domain
Length = 878
Score = 29.9 bits (64), Expect = 0.49
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = -1
Query: 345 RRSNRGTRANRQPARRRGADATPSASTRAVSRRMP--*HRAPGTR*RWTRR 199
RRS R + A+R P RRR +PS+S R P HR+P R R +R
Sbjct: 591 RRSRRSSSASRSPDRRR--RRSPSSSRSPSRSRSPPVLHRSPSPRGRKHQR 639
>At1g20030.2 68414.m02508 pathogenesis-related thaumatin family
protein similar to receptor serine/threonine kinase PR5K
[Arabidopsis thaliana] GI:1235680; contains Pfam profile
PF00314: Thaumatin family
Length = 316
Score = 29.9 bits (64), Expect = 0.49
Identities = 21/58 (36%), Positives = 26/58 (44%)
Frame = +1
Query: 142 RRCHSPSGWCGATWARTRCPSRPPSTGSRCPVSGHTSTHGSGRC*RSCVRSATPGWLS 315
R ++PS W G W RT C ST S S T GSG+ S +A P L+
Sbjct: 58 RTINAPSSWGGRFWGRTLC-----STDSDGKFSCATGDCGSGKIECSGAGAAPPATLA 110
>At1g20030.1 68414.m02509 pathogenesis-related thaumatin family
protein similar to receptor serine/threonine kinase PR5K
[Arabidopsis thaliana] GI:1235680; contains Pfam profile
PF00314: Thaumatin family
Length = 299
Score = 29.9 bits (64), Expect = 0.49
Identities = 21/58 (36%), Positives = 26/58 (44%)
Frame = +1
Query: 142 RRCHSPSGWCGATWARTRCPSRPPSTGSRCPVSGHTSTHGSGRC*RSCVRSATPGWLS 315
R ++PS W G W RT C ST S S T GSG+ S +A P L+
Sbjct: 41 RTINAPSSWGGRFWGRTLC-----STDSDGKFSCATGDCGSGKIECSGAGAAPPATLA 93
>At3g10810.1 68416.m01301 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 Zinc
finger, C3HC4 type (RING finger)
Length = 496
Score = 29.1 bits (62), Expect = 0.85
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -2
Query: 116 VQPVASRAPHRTRRRA 69
V PVAS APHR+R+RA
Sbjct: 365 VSPVASPAPHRSRKRA 380
>At4g38670.1 68417.m05475 pathogenesis-related thaumatin family
protein similar to receptor serine/threonine kinase PR5K
[Arabidopsis thaliana] GI:1235680; contains Pfam profile
PF00314: Thaumatin family
Length = 281
Score = 28.7 bits (61), Expect = 1.1
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +1
Query: 157 PSGWCGATWARTRCPSRPPSTGSRCPVSGHTSTHGSGR 270
P W G WART C S+ S+GS ++G GSG+
Sbjct: 66 PESWSGRLWARTLC-SQDRSSGSFVCLTGDC---GSGK 99
>At4g24180.1 68417.m03470 pathogenesis-related thaumatin family
protein similar to SP|P28493 Pathogenesis-related
protein 5 precursor (PR-5) {Arabidopsis thaliana};
contains Pfam profile PF00314: Thaumatin family
Length = 255
Score = 28.7 bits (61), Expect = 1.1
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 136 GCRRCHSPSGWCGATWARTRC 198
G R +P+ W G WART C
Sbjct: 64 GSRSFQAPASWSGRFWARTGC 84
>At1g70250.1 68414.m08082 receptor serine/threonine kinase, putative
similar to to receptor serine/threonine kinase PR5K
gi|1235680|gb|AAC49208
Length = 799
Score = 28.7 bits (61), Expect = 1.1
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +1
Query: 142 RRCHSPSGWCGATWARTRCPSRPPSTGSRCPVSGHTSTHGSGRC 273
R +PS W G W RT C + STG +G T G +C
Sbjct: 181 RTIKAPSSWIGRFWGRTLCSTN--STGGFSCATG-DCTSGKIKC 221
>At5g37010.1 68418.m04438 expressed protein
Length = 637
Score = 28.3 bits (60), Expect = 1.5
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Frame = -3
Query: 316 STTSPASRSGRNSFSIDQSRESTYALTPGTGNPLKVD-ATGIVYA-PMSRHTTHSASDIA 143
S +P S SG + S + +R + P T L + G V + R+ +AS +
Sbjct: 222 SEINPNS-SGNSVNSSNNNRPGKFVSVPATDKALSNNNGDGSVKRITVKRNVGKAASPRS 280
Query: 142 GSRVAATTQSSPSQVGPHTEHGDER 68
S A +Q SPS++ TEH R
Sbjct: 281 QSPARAASQPSPSKLSRKTEHSPYR 305
>At2g18420.1 68415.m02145 gibberellin-responsive protein, putative
similar to SP|P46689 Gibberellin-regulated protein 1
precursor {Arabidopsis thaliana}; contains Pfam profile
PF02704: Gibberellin regulated protein
Length = 88
Score = 28.3 bits (60), Expect = 1.5
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +1
Query: 169 CGATWARTRCPSRPPSTGS--RCPVSGHTSTHGSGR 270
CG AR C + P ++G+ +CP G +THG R
Sbjct: 41 CGTCCARCNCVA-PGTSGNYDKCPCYGSLTTHGGRR 75
>At1g75050.1 68414.m08717 thaumatin-like protein, putative /
pathogenesis-related protein, putative similar to
thaumatin-like protein [Arabidopsis thaliana]
GI:2435406, SP|P28493 Pathogenesis-related protein 5
precursor (PR-5) {Arabidopsis thaliana}; contains Pfam
profile: PF00314 Thaumatin family
Length = 257
Score = 28.3 bits (60), Expect = 1.5
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1
Query: 154 SPSGWCGATWARTRC 198
+P+GW G WART C
Sbjct: 77 APAGWSGRFWARTGC 91
>At1g75030.1 68414.m08715 pathogenesis-related thaumatin family
protein identical to thaumatin-like protein [Arabidopsis
thaliana] GI:2435406; contains Pfam profile: PF00314
Thaumatin family
Length = 246
Score = 28.3 bits (60), Expect = 1.5
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1
Query: 154 SPSGWCGATWARTRC 198
+P+GW G WART C
Sbjct: 65 APTGWSGRFWARTGC 79
>At3g18770.1 68416.m02382 expressed protein
Length = 625
Score = 27.5 bits (58), Expect = 2.6
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = -3
Query: 286 RNSFSIDQSRESTYALTPGTGNPLKVDATGIVYAPMSRHTTHSASDIAGSRVAATTQSSP 107
R+S+S D+ + S +++ +P + D+ +V P SRH SDI R +S P
Sbjct: 309 RHSWSFDRYKASPPSVSCSP-SPTRSDSHALVSHPCSRHLPPHPSDIPTGR---RKESYP 364
Query: 106 SQVGP 92
+ P
Sbjct: 365 EEYSP 369
>At5g19650.1 68418.m02338 ovate protein, putative 84% similar to
ovate protein (GI:23429649) [Lycopersicon esculentum];
contains TIGRFAM TIGR01568 : uncharacterized
plant-specific domain TIGR01568
Length = 221
Score = 27.1 bits (57), Expect = 3.4
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +1
Query: 178 TWARTRCPSRPPSTGSRCP 234
T A+T+ PSRP S S CP
Sbjct: 47 TKAKTKTPSRPKSHASSCP 65
>At4g03440.1 68417.m00471 ankyrin repeat family protein contains
ankyrin repeats, Pfam domain PF00023
Length = 751
Score = 27.1 bits (57), Expect = 3.4
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -1
Query: 336 NRGTRANRQPARRRGADATPSAST 265
N GT ++R RRRG +ATP +T
Sbjct: 40 NLGTLSSRSFLRRRGDEATPPTTT 63
>At3g04610.1 68416.m00493 KH domain-containing protein similar
putative nucleic acid binding protein GB:CAB39665
[Arabidopsis thaliana]; Pfam HMM hit: KH domain family
of RNA binding proteins
Length = 577
Score = 27.1 bits (57), Expect = 3.4
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = -2
Query: 287 TQLLQHRPEP*VDVCPDTGHREPVEGGRDGHRVRAHVAP 171
T+ + H P P P GH V GG GH ++ P
Sbjct: 370 TRQMDHMPPPHQSWGPPQGHAPSVGGGGYGHNPPPYMQP 408
>At1g74440.1 68414.m08624 expressed protein similar to YGL010w-like
protein GB:AAC32136 [Picea mariana]
Length = 208
Score = 27.1 bits (57), Expect = 3.4
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 207 STFNGFPVPGVRAYVDSRLWSMLKELR 287
S F P PG +A VDS++ S +KE R
Sbjct: 170 SVFGYEPYPGFKARVDSKIESGIKEWR 196
>At5g22880.1 68418.m02676 histone H2B, putative strong similarity to
histone H2B-3 Lycopersicon esculentum GI:3021485, H2B
Gossypium hirsutum SP|O22582; contains Pfam profile
PF00125 Core histone H2A/H2B/H3/H4
Length = 145
Score = 26.6 bits (56), Expect = 4.5
Identities = 9/28 (32%), Positives = 19/28 (67%)
Frame = -1
Query: 324 RANRQPARRRGADATPSASTRAVSRRMP 241
+A+++PA ++ A+ TP+A A + + P
Sbjct: 3 KADKKPAEKKPAEKTPAAEPAAAAEKKP 30
>At4g35760.1 68417.m05076 expressed protein
Length = 376
Score = 26.6 bits (56), Expect = 4.5
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = -3
Query: 343 AEQPRNSCESTTSPASRSGRNSFSIDQSRESTYALTPGTGNPLKVDATGIVY 188
+ +P N +S S +S S ++ + S STY G G +D + Y
Sbjct: 48 SSEPENGEDSAPSLSSSSSSSTSEVSTSNSSTYNWYTGIGGIGMLDTAYLTY 99
>At4g25970.1 68417.m03737 phosphatidylserine decarboxylase, putative
similar to SP|P53037 Phosphatidylserine decarboxylase
proenzyme 2 precursor (EC 4.1.1.65) {Saccharomyces
cerevisiae}; contains Pfam profile PF02666:
phosphatidylserine decarboxylase
Length = 635
Score = 26.6 bits (56), Expect = 4.5
Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Frame = -3
Query: 169 TTHSASDIAGSRVAATTQSSPS---QVGPHTEHGDERSQLTFSGSATTC 32
+T +A + AT S S Q G H + GDE +F GS C
Sbjct: 542 STAEFGKVAFVAIGATMVGSISFVRQEGDHVKKGDELGYFSFGGSTVIC 590
>At1g74790.1 68414.m08665 expressed protein contains similarity to
hedgehog-interacting protein GI:4868122 from [Mus
musculus]
Length = 695
Score = 26.6 bits (56), Expect = 4.5
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +1
Query: 148 CHSPSGWCGATWARTRCPSRPPSTGSRCPVSGHT 249
C + S W + +R PS ST S CP G T
Sbjct: 16 CFALSSWALPLCSDSRAPSEVNSTLSFCPYKGKT 49
>At5g49000.1 68418.m06062 kelch repeat-containing F-box family
protein contains F-box domain Pfam:PF00646 and Kelch
motif Pfam:PF01344
Length = 372
Score = 26.2 bits (55), Expect = 6.0
Identities = 12/29 (41%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = -3
Query: 208 DATGIVYAPMSRHTTHSASDIA-GSRVAA 125
+++G V AP+ H +HS+S +A GS + A
Sbjct: 106 NSSGFVLAPIPNHHSHSSSIVAIGSNIYA 134
>At5g02460.1 68418.m00173 Dof-type zinc finger domain-containing
protein zinc finger protein OBP3, Arabidopsis thaliana,
EMBL:AF155818
Length = 399
Score = 26.2 bits (55), Expect = 6.0
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -2
Query: 209 GRDGHRVRAHVAPHHPLGE*HRRQPGRGHH 120
G G+ + PHHPL ++ P + HH
Sbjct: 28 GFTGNNINQQFLPHHPLPPQQQQTPPQLHH 57
>At4g36970.1 68417.m05239 remorin family protein contains Pfam
domain, PF03763: Remorin, C-terminal region
Length = 427
Score = 26.2 bits (55), Expect = 6.0
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +3
Query: 204 ASTFNGFPVPGVRAYVDSRLWS 269
+++F GF PG +Y D++ WS
Sbjct: 8 SNSFGGFLSPGAPSYADNKGWS 29
>At3g13330.1 68416.m01678 expressed protein
Length = 1711
Score = 26.2 bits (55), Expect = 6.0
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -3
Query: 301 ASRSGRNSFSIDQSRESTYALTPGTGNPLKVDATGIVY 188
A+ SG FS+D R + + + T P K A IVY
Sbjct: 184 ANGSGSYPFSVDVPRNTRFLFSNRTTTPSKSIAQSIVY 221
>At2g40070.1 68415.m04923 expressed protein
Length = 607
Score = 26.2 bits (55), Expect = 6.0
Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Frame = -3
Query: 331 RNSCEST-TSPASRSGRNSFSIDQSRESTYALTPGTGNPLKVDATGIVYAPMSRHTTHSA 155
++S ST TS A+ S S+ SR + A T T + P + T S
Sbjct: 201 KSSRPSTPTSRATVSSATRPSLTNSRSTVSATTKPTPMSRSTSLSSSRLTPTASKPTTST 260
Query: 154 SDIAGSRVAATTQSSPSQVGP 92
+ AGS +T ++ GP
Sbjct: 261 ARSAGSVTRSTPSTTTKSAGP 281
>At2g32940.1 68415.m04038 PAZ domain-containing protein / piwi
domain-containing protein similar to SP|O04379 Argonaute
protein (AGO1) {Arabidopsis thaliana}, SP|Q9XGW1 PINHEAD
protein (ZWILLE protein) {Arabidopsis thaliana};
contains Pfam profiles PF02171: Piwi domain, PF02170:
PAZ domain
Length = 878
Score = 26.2 bits (55), Expect = 6.0
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = -3
Query: 247 YALTPGTGNPLKVDATGIVYAPMSRHTTHSASDIAGSRVAATTQSSPSQVGP 92
Y ++ T N VD TGI M + +SD+ G R+A + + VGP
Sbjct: 60 YTVSITTENGDAVDGTGISRKLMDQLFKTYSSDLDGKRLAYDGEKTLYTVGP 111
>At1g78160.1 68414.m09108 pumilio/Puf RNA-binding domain-containing
protein contains Pfam profile: PF00806 Pumilio-family
RNA binding domains (aka PUM-HD, Pumilio homology
domain) (8 copies at C-terminal half of protein)
Length = 650
Score = 26.2 bits (55), Expect = 6.0
Identities = 13/40 (32%), Positives = 17/40 (42%)
Frame = -3
Query: 328 NSCESTTSPASRSGRNSFSIDQSRESTYALTPGTGNPLKV 209
+ C S N SID R +T AL GNP ++
Sbjct: 284 SKCSEPFSSDESFFMNGKSIDHQRSNTRALMSNNGNPTEI 323
>At1g76510.2 68414.m08903 ARID/BRIGHT DNA-binding domain-containing
protein contains Pfam profile PF01388: ARID/BRIGHT DNA
binding domain
Length = 434
Score = 26.2 bits (55), Expect = 6.0
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +1
Query: 211 PSTGSRCPVSGHTSTHGSGRC*RSCVRSATPGWLSIR 321
PS+G S H ++ GSGR R A GW S R
Sbjct: 247 PSSGIEKEASSHQAS-GSGRTRRDAAARAMQGWHSQR 282
>At1g76510.1 68414.m08902 ARID/BRIGHT DNA-binding domain-containing
protein contains Pfam profile PF01388: ARID/BRIGHT DNA
binding domain
Length = 434
Score = 26.2 bits (55), Expect = 6.0
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +1
Query: 211 PSTGSRCPVSGHTSTHGSGRC*RSCVRSATPGWLSIR 321
PS+G S H ++ GSGR R A GW S R
Sbjct: 247 PSSGIEKEASSHQAS-GSGRTRRDAAARAMQGWHSQR 282
>At5g51290.1 68418.m06358 ceramide kinase-related contains weak
similarity to ceramide kinases (GI:21624342) [Mus
musculus]
Length = 608
Score = 25.8 bits (54), Expect = 7.9
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +1
Query: 130 RPGCRRCHSPSGWCGATWARTRCPSR 207
R C+ C+S GW A+ CP +
Sbjct: 461 RANCKICNSKVGWNSASTTLNPCPEK 486
>At5g10720.1 68418.m01242 sensory transduction histidine
kinase-related similar to Sensor protein rcsC (Capsular
synthesis regulator component C) (SP:Q56128) {Salmonella
typhi}; sensory transduction histidine kinase slr1759,
Synechocystis sp., PIR:S75142
Length = 950
Score = 25.8 bits (54), Expect = 7.9
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +1
Query: 202 SRPPSTGSRCPVSGHTSTHGSGRC 273
S+ ++ CP S H +G+GRC
Sbjct: 736 SKLETSSGHCPESAHQYENGNGRC 759
>At4g31800.1 68417.m04517 WRKY family transcription factor
Length = 310
Score = 25.8 bits (54), Expect = 7.9
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = -3
Query: 184 PMSRHTTHSASDIAGSRVAATTQSSPSQVGPHTEHGDERSQLTFSGSAT 38
P+ + SA D S + AT + + + +GP+ GD SQ GS+T
Sbjct: 208 PVKKKVQRSAED--PSLLVATYEGTHNHLGPNASEGDATSQ---GGSST 251
>At3g63100.1 68416.m07087 glycine-rich protein
Length = 199
Score = 25.8 bits (54), Expect = 7.9
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = -2
Query: 209 GRDGHRVRAHVAPHHPLGE*HRRQPGRGH 123
GRD R H HH G HRR GRGH
Sbjct: 116 GRDRGHHRGH-GHHHHRG--HRRGRGRGH 141
>At3g05400.1 68416.m00590 sugar transporter, putative similar to
sugar-porter family proteins 1 and 2 [Arabidopsis
thaliana] GI:14585699, GI:14585701, integral membrane
protein GB:U43629 from [Beta vulgaris]; contains Pfam
profile PF00083: major facilitator superfamily protein
Length = 462
Score = 25.8 bits (54), Expect = 7.9
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +3
Query: 144 AMSLAEWVVWRDMGAYTMPVASTFNGFPVP 233
A+SLA+ ++W DMG + + + + VP
Sbjct: 109 AISLAKDIIWLDMGRFLVGIGVGLISYVVP 138
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,780,694
Number of Sequences: 28952
Number of extensions: 162645
Number of successful extensions: 592
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 592
length of database: 12,070,560
effective HSP length: 72
effective length of database: 9,986,016
effective search space used: 429398688
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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