Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_H15
(608 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0268 + 1784781-1785056,1787314-1787394,1787395-1787856 81 9e-16
03_03_0187 + 15253000-15253207,15253281-15253370,15254338-152544... 64 1e-10
02_05_0057 + 25472872-25472912,25473012-25473157,25474008-254740... 63 2e-10
08_02_1495 + 27526008-27526390,27526462-27526876,27529162-27529323 53 2e-07
09_06_0102 + 20870346-20870518,20870599-20871013,20872180-20872341 52 4e-07
11_06_0394 - 23084485-23084577,23084677-23084802,23085134-230852... 43 2e-04
03_01_0568 - 4192514-4192606,4192694-4192753,4192837-4192932,419... 40 0.002
01_06_1091 + 34464923-34465026,34465124-34465163,34465245-344653... 33 0.18
07_01_0785 + 6095041-6095135,6095455-6095760,6098458-6098554,609... 32 0.41
05_03_0039 - 7621613-7622695 31 0.71
02_03_0275 + 17185335-17185895,17186460-17186516,17187360-171884... 29 2.9
05_05_0306 - 23977543-23977614,23977709-23977799,23978296-239783... 29 3.8
05_03_0040 - 7646525-7647775 29 3.8
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 28 5.0
04_04_0456 - 25355409-25355751,25356047-25356205,25356317-253565... 28 5.0
02_05_0910 - 32684836-32685259,32685911-32685987,32686179-32686421 28 5.0
04_04_0137 - 23053148-23053798,23053911-23054146,23054268-230544... 28 6.7
01_06_1167 - 35062766-35062870,35063165-35063228,35063647-350637... 28 6.7
10_08_0683 - 19860777-19861070,19861677-19861874,19862498-198626... 27 8.8
08_02_0972 - 23187294-23188034 27 8.8
08_01_0898 - 8856146-8856566,8857607-8857811,8858776-8858820,886... 27 8.8
03_03_0224 + 15580944-15581036,15581630-15581770,15582385-155824... 27 8.8
>02_01_0268 + 1784781-1785056,1787314-1787394,1787395-1787856
Length = 272
Score = 80.6 bits (190), Expect = 9e-16
Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 3/133 (2%)
Frame = +3
Query: 3 GYDDQGPHIYQTCPSANFFDCRAMAIGARSQSARTYLEKHLSTFIDCDLQELVAHGLRAL 182
G D+ G H+Y CPS N+F+ +A AIG+RSQ+A+T+LE+ + D ++L+ L A+
Sbjct: 138 GLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTFLERRFEGYNDYTPEQLIKDALSAI 197
Query: 183 RDTLPNEMDLNNKNVSIAIVG--PDTPLRVCEEEELGRFLALVEG-EERRXXXXXXXXXX 353
++TL E L + N ++AIVG D + E ++ R +++ E
Sbjct: 198 KETLQGE-KLTSSNCTVAIVGRKDDGTVEPFEMIDVKRIQEIIDSMEAAEEAPAAEAESS 256
Query: 354 XXQPRDQGDDIDP 392
Q D+G D P
Sbjct: 257 SMQEEDKGTDAAP 269
>03_03_0187 +
15253000-15253207,15253281-15253370,15254338-15254402,
15254489-15254535,15255195-15255270,15255432-15255499,
15255793-15255862,15256024-15256109,15256328-15256390,
15256472-15256537,15256938-15256986
Length = 295
Score = 63.7 bits (148), Expect = 1e-10
Identities = 33/102 (32%), Positives = 54/102 (52%)
Frame = +3
Query: 3 GYDDQGPHIYQTCPSANFFDCRAMAIGARSQSARTYLEKHLSTFIDCDLQELVAHGLRAL 182
GYDD GP +YQ PS ++F +A A+G +A+T+LEK + D +L + + + L
Sbjct: 198 GYDDNGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTE--DMELDDAIHTAILTL 255
Query: 183 RDTLPNEMDLNNKNVSIAIVGPDTPLRVCEEEELGRFLALVE 308
++ ++ N N+ I I+ D +V E+ FL VE
Sbjct: 256 KEGYEGQISAN--NIEIGIIRSDREFKVLSPAEIKDFLEEVE 295
>02_05_0057 +
25472872-25472912,25473012-25473157,25474008-25474072,
25474182-25474228,25474922-25474997,25475176-25475243,
25475862-25475931,25476178-25476263,25476418-25476480,
25476556-25476621,25476740-25476788
Length = 258
Score = 62.9 bits (146), Expect = 2e-10
Identities = 32/102 (31%), Positives = 54/102 (52%)
Frame = +3
Query: 3 GYDDQGPHIYQTCPSANFFDCRAMAIGARSQSARTYLEKHLSTFIDCDLQELVAHGLRAL 182
GYDD GP +YQ PS ++F +A A+G +A+T+LEK + D +L + + + L
Sbjct: 161 GYDDNGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTE--DMELDDAIHTAILTL 218
Query: 183 RDTLPNEMDLNNKNVSIAIVGPDTPLRVCEEEELGRFLALVE 308
++ ++ N N+ I ++ D +V E+ FL VE
Sbjct: 219 KEGYEGQISAN--NIEIGVIRSDREFKVLTPAEIKDFLEEVE 258
>08_02_1495 + 27526008-27526390,27526462-27526876,27529162-27529323
Length = 319
Score = 52.8 bits (121), Expect = 2e-07
Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
Frame = +3
Query: 3 GYDD--QGPHIYQTCPSANFFDCRAMAIGARSQSARTYLEKHLSTFIDCDLQELVAHGLR 176
G+D + P +YQT PS F +A A G S S R +LEK+ + D +E + +R
Sbjct: 206 GFDPYTEKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKN---YKDTSGKETIKLAIR 262
Query: 177 ALRDTLPNEMDLNNKNVSIAIVGPDTPLRVCEEEELGRFLALVEGEE 317
AL + ++ KN+ IA++ LR EE E+ ++A +E E+
Sbjct: 263 ALLEV----VESGGKNIEIAVMTHKDGLRELEEAEIDEYVAEIEAEK 305
>09_06_0102 + 20870346-20870518,20870599-20871013,20872180-20872341
Length = 249
Score = 52.0 bits (119), Expect = 4e-07
Identities = 34/104 (32%), Positives = 55/104 (52%)
Frame = +3
Query: 6 YDDQGPHIYQTCPSANFFDCRAMAIGARSQSARTYLEKHLSTFIDCDLQELVAHGLRALR 185
Y D+ P +YQT PS F +A A G S S R +LEK+ + + +E + +RAL
Sbjct: 140 YTDK-PALYQTDPSGTFSAWKANATGRNSNSMREFLEKN---YKETSGKETIKLAIRALL 195
Query: 186 DTLPNEMDLNNKNVSIAIVGPDTPLRVCEEEELGRFLALVEGEE 317
+ ++ KN+ IA++ LR EE E+ ++A +E E+
Sbjct: 196 EV----VESGGKNIEIAVMTQKDGLRQLEEAEIDEYVAEIEAEK 235
>11_06_0394 -
23084485-23084577,23084677-23084802,23085134-23085236,
23085895-23085953,23086418-23086519,23086601-23086714,
23087666-23087746,23088073-23088154,23088504-23088556
Length = 270
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 4/49 (8%)
Frame = +3
Query: 3 GYDDQGPHIYQTCPSANFFDCRAMAIGARSQSARTYLE----KHLSTFI 137
G+D+ GP +Y T PS F+ C A AIG+ S+ A + L+ K L+ FI
Sbjct: 156 GHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKSLTVFI 204
>03_01_0568 -
4192514-4192606,4192694-4192753,4192837-4192932,
4193088-4193170,4193289-4193347,4193463-4193559,
4194151-4194232,4194353-4194447,4194585-4194660
Length = 246
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Frame = +3
Query: 3 GYDDQ-GPHIYQTCPSANFFDCRAMAIGARSQSARTYLEKHLSTFIDCDLQELVAHGLRA 179
GYD++ +++ P+ +FF +A + G + Q A +LEK + +E V + A
Sbjct: 142 GYDEEKNAQLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKDDPQFSYEETVQIAISA 201
Query: 180 LRDTLPNEMDLNNKNVSIAIVGPDTPL-RVCEEEELGRFLALV 305
L+ L + D + + +V D + R EE+ + L +
Sbjct: 202 LQSVL--QEDFKATEIEVGVVRKDDRVFRALTTEEIDQHLTAI 242
>01_06_1091 +
34464923-34465026,34465124-34465163,34465245-34465328,
34465457-34465480,34465582-34465655,34465726-34465812,
34465922-34466006,34466215-34466261,34467048-34467113,
34468307-34468397,34468477-34468548
Length = 257
Score = 33.1 bits (72), Expect = 0.18
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 3 GYDDQGPHIYQTCPSANFFDCRAMAIGARSQSARTYLEKHLSTFIDC 143
GYD GP +Y PS + A+G Q+A+T +EK + + C
Sbjct: 148 GYDRDGPQLYMIEPSGVSYKYFGAALGKGRQAAKTEIEKLKLSELTC 194
>07_01_0785 +
6095041-6095135,6095455-6095760,6098458-6098554,
6098943-6098999,6099202-6099751,6099922-6100234,
6100245-6100335,6101002-6101469
Length = 658
Score = 31.9 bits (69), Expect = 0.41
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 6/56 (10%)
Frame = +3
Query: 126 STFIDCDLQELVAHGL--RALRDTLPNEMDLNNKNVSIAIVGPDTPLR----VCEE 275
S + C++ E+V G L D + MD N N + + GPD P +CEE
Sbjct: 306 SELMQCEMSEVVRDGCSNNILEDEIQMLMDCQNSNCQLNLQGPDEPCHSWHFLCEE 361
>05_03_0039 - 7621613-7622695
Length = 360
Score = 31.1 bits (67), Expect = 0.71
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 315 PHPRPEPGTCRVPPPRKHVRVYPDPQSLL 229
PHP PEP P P+ + YP+P+ L
Sbjct: 304 PHPMPEPEPKPKPEPKPEPKPYPEPKPKL 332
>02_03_0275 +
17185335-17185895,17186460-17186516,17187360-17188454,
17188527-17188607
Length = 597
Score = 29.1 bits (62), Expect = 2.9
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +3
Query: 126 STFIDCDLQELVAHGLRALRDTLPNE-MDLNNKNVSIAIVGPDTPLRVCEEEELGRFLAL 302
STF D L ++ LRD + +D ++ + S P TPL EEE++ R L L
Sbjct: 226 STFTDHSLPYSLSVPNHLLRDMISAWCLDHSDLSPSTTSDTPSTPLEPSEEEQIQRILKL 285
Query: 303 VEG 311
G
Sbjct: 286 FSG 288
>05_05_0306 -
23977543-23977614,23977709-23977799,23978296-23978361,
23978399-23978479,23979130-23979176,23979408-23979492,
23979570-23979656,23979728-23979801,23980083-23980166,
23980259-23980298,23980386-23980489
Length = 276
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 3 GYDDQGPHIYQTCPSANFFDCRAMAIGARSQSART 107
GYD GP +Y PS + A+G Q+A+T
Sbjct: 140 GYDRDGPQLYMIEPSGLSYKYFGAALGKGRQAAKT 174
>05_03_0040 - 7646525-7647775
Length = 416
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -3
Query: 315 PHPRPEPGTCRVPPPRKHVRVYPDPQ 238
PHP PEP P P+ H P P+
Sbjct: 180 PHPEPEPKPEPKPEPKPHPEPEPKPE 205
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -3
Query: 315 PHPRPEPGTCRVPPPRKHVRVYPDPQ 238
P P+PEP P P+ + YP+P+
Sbjct: 86 PEPKPEPKPEPKPEPKPEPKPYPEPK 111
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -3
Query: 315 PHPRPEPGTCRVPPPRKHVRVYPDPQ 238
P P+PEP P P+ + YP+P+
Sbjct: 360 PEPKPEPKPEPKPEPKPEPKPYPEPK 385
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -3
Query: 315 PHPRPEPGTCRVPPPRKHVRVYPDPQSLL 229
P P P P R PPR+H R+ P P LL
Sbjct: 70 PTPPPPPPAPR--PPRRHHRIPPPPPPLL 96
>04_04_0456 -
25355409-25355751,25356047-25356205,25356317-25356513,
25356602-25356794,25357044-25358287
Length = 711
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 365 KRSGGRHRSTSRCGDGHGITAER 433
KR GG+H CG GH +T+ +
Sbjct: 53 KRGGGKHGGGGGCGGGHVMTSSK 75
>02_05_0910 - 32684836-32685259,32685911-32685987,32686179-32686421
Length = 247
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -3
Query: 312 HPRPEPGTCRVPPPRKHVRVY 250
HP +P T PPPR H R +
Sbjct: 17 HPSSDPSTAPQPPPRNHGRYW 37
>04_04_0137 -
23053148-23053798,23053911-23054146,23054268-23054458,
23054587-23056010
Length = 833
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/27 (44%), Positives = 13/27 (48%), Gaps = 1/27 (3%)
Frame = -3
Query: 318 APHPRPEPGTCRVPPPRKHVRV-YPDP 241
AP P P P +PPP H PDP
Sbjct: 75 APAPAPAPARAHLPPPLLHKNARLPDP 101
>01_06_1167 -
35062766-35062870,35063165-35063228,35063647-35063738,
35064137-35064205,35064322-35064412,35064509-35064732,
35065064-35065180,35065583-35065651,35066172-35066237,
35066335-35066505,35066581-35066661,35067620-35067700
Length = 409
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/43 (23%), Positives = 23/43 (53%)
Frame = +2
Query: 398 RCGDGHGITAERLQETSEEMTILPSSEVPLLPSNIIFYTVIIF 526
+CG+ H + Q+ S++ +L + P + ++F T+ +F
Sbjct: 68 KCGEQHALLGNLNQDLSQKSVLLGNGFKPSVADIVVFATIQVF 110
>10_08_0683 -
19860777-19861070,19861677-19861874,19862498-19862659,
19862763-19862911,19863089-19863236,19863317-19863385,
19863471-19863719,19863937-19864131,19864444-19864560,
19864978-19866537
Length = 1046
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 6/45 (13%)
Frame = -3
Query: 315 PHPRPEPGTCR------VPPPRKHVRVYPDPQSLLTHFYY*DPFH 199
P P+P+P PPP +H YP PQ Y DP+H
Sbjct: 59 PQPQPQPYAHHSAPLQPYPPPPQH-HAYPPPQPHPPSPYVYDPYH 102
>08_02_0972 - 23187294-23188034
Length = 246
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = -3
Query: 300 EPGTCRVPPPRKHVRVYPDPQSL 232
+P T R PP R++VR+ DPQS+
Sbjct: 143 DPETVR-PPKRRNVRISTDPQSV 164
>08_01_0898 -
8856146-8856566,8857607-8857811,8858776-8858820,
8860204-8860608,8861175-8861298
Length = 399
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -1
Query: 467 VIWSFLLRFLGGVQPLFRVHRHSDLWIYVVPLISW 363
+IW ++LR GG + + +S IY LISW
Sbjct: 224 IIWGYILRMRGGSLMVTAQYGYSFAPIYNPKLISW 258
>03_03_0224 +
15580944-15581036,15581630-15581770,15582385-15582493,
15582598-15582659,15583704-15583807,15584058-15584160
Length = 203
Score = 27.5 bits (58), Expect = 8.8
Identities = 26/82 (31%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
Frame = +3
Query: 78 IGARSQSARTYLEKHLSTF-IDCDLQELVAHGLRALRDTLPNEMDLNNKNVSIAIVGPDT 254
+G R+ + Y E H + ID AL L +E DL + I D
Sbjct: 79 VGLRTIWEKYYQEAHAIIYVIDAAAASSFEDAKSALEKVLRHE-DLKGAPLLIFANKQDL 137
Query: 255 PLRVCEEEELGRFLALVEGEER 320
P V +EEL R+L L E +ER
Sbjct: 138 P-GVITDEELARYLQLKELDER 158
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,232,467
Number of Sequences: 37544
Number of extensions: 433047
Number of successful extensions: 1702
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1688
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1454766756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -