Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_H15
(608 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome al... 98 4e-21
Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical pr... 41 6e-04
Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical pr... 41 6e-04
Z81564-1|CAB04567.1| 284|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z81136-5|CAB03460.2| 733|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z46812-6|CAA86848.2| 546|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z46812-5|CAA86847.2| 775|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z37093-8|CAA85469.2| 546|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z37093-7|CAA85468.2| 775|Caenorhabditis elegans Hypothetical pr... 27 7.9
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 27 7.9
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 27 7.9
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 27 7.9
>AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome alpha
subunit protein 6 protein.
Length = 260
Score = 98.3 bits (234), Expect = 4e-21
Identities = 50/106 (47%), Positives = 64/106 (60%)
Frame = +3
Query: 3 GYDDQGPHIYQTCPSANFFDCRAMAIGARSQSARTYLEKHLSTFIDCDLQELVAHGLRAL 182
GYD G HI QT PSA +IGARSQSARTYLE+++ F ++L+ H L AL
Sbjct: 136 GYDKDGAHIIQTDPSAEVVSMHGTSIGARSQSARTYLERNVDNFEKSTPEQLIVHALLAL 195
Query: 183 RDTLPNEMDLNNKNVSIAIVGPDTPLRVCEEEELGRFLALVEGEER 320
RDTLP E +LN +N SI IVG D+P + E+ ++ L V R
Sbjct: 196 RDTLPAEENLNAQNTSIGIVGKDSPFSLLEDAQVAVHLNQVSTHPR 241
>Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical
protein F25H2.9 protein.
Length = 248
Score = 43.6 bits (98), Expect = 1e-04
Identities = 24/82 (29%), Positives = 41/82 (50%)
Frame = +3
Query: 3 GYDDQGPHIYQTCPSANFFDCRAMAIGARSQSARTYLEKHLSTFIDCDLQELVAHGLRAL 182
G D +G ++ PS F DC+A +IGA S A L++ + ++E + L L
Sbjct: 144 GVDQEGAKLFHLDPSGTFIDCKAKSIGAASDGAEQNLKEQYHDAL--TIKEGLKMALAIL 201
Query: 183 RDTLPNEMDLNNKNVSIAIVGP 248
+ + E LN+ NV + ++ P
Sbjct: 202 KQVM--EEKLNSANVEVVVIKP 221
>Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical
protein C15H11.7 protein.
Length = 246
Score = 41.1 bits (92), Expect = 6e-04
Identities = 20/83 (24%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +3
Query: 6 YDDQ-GPHIYQTCPSANFFDCRAMAIGARSQSARTYLEKHLSTFIDCDLQELVAHGLRAL 182
YDD+ GP +Y+ P+ + + +++G + A ++LEK + + E + + AL
Sbjct: 143 YDDEKGPEVYRVDPAGYYRGMKGVSVGVKQLPATSFLEKKIKKKSELTSTEAIELAIEAL 202
Query: 183 RDTLPNEMDLNNKNVSIAIVGPD 251
+ +L +D+ +K++ + +V D
Sbjct: 203 QTSL--GIDVRSKDLEVVVVTKD 223
>Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical
protein D1054.2 protein.
Length = 231
Score = 41.1 bits (92), Expect = 6e-04
Identities = 22/73 (30%), Positives = 41/73 (56%)
Frame = +3
Query: 21 PHIYQTCPSANFFDCRAMAIGARSQSARTYLEKHLSTFIDCDLQELVAHGLRALRDTLPN 200
P ++Q PS +F +A A+G +A+T+LEK S ++ D + + L LR++
Sbjct: 142 PLLFQCDPSGAYFAWKATALGKNDVNAKTFLEKRFSEALELD--DGIHTALLTLRESF-- 197
Query: 201 EMDLNNKNVSIAI 239
++ +N NV +A+
Sbjct: 198 DVGMNENNVEVAV 210
>Z81564-1|CAB04567.1| 284|Caenorhabditis elegans Hypothetical
protein K05C4.1 protein.
Length = 284
Score = 28.3 bits (60), Expect = 4.5
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = +3
Query: 3 GYDDQGPHIYQTCPSANFFDCRAMAIGARSQSARTYLEKHLSTFIDCDLQELVAHGLRAL 182
GYD +GP I++ + + ++G+ S +A L+ H + D E GLRA+
Sbjct: 174 GYDKKGPQIFKVDSEGDRCQLKVCSVGSGSLNAYGILDNHYKPKMTDD--EARKLGLRAI 231
>Z81136-5|CAB03460.2| 733|Caenorhabditis elegans Hypothetical
protein W02B8.4 protein.
Length = 733
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 443 TSEEMTILPSSEVPLLPSNIIFYTVIIFKWVLPSTI 550
TS+ + + P+ VPL+ S +F VI+ WV I
Sbjct: 571 TSQPLILSPALFVPLIQSPAVFGAVILSPWVFVPVI 606
>Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical
protein ZK945.2 protein.
Length = 250
Score = 27.5 bits (58), Expect = 7.9
Identities = 19/79 (24%), Positives = 34/79 (43%)
Frame = +3
Query: 18 GPHIYQTCPSANFFDCRAMAIGARSQSARTYLEKHLSTFIDCDLQELVAHGLRALRDTLP 197
G ++ PS ++ +A A+G Q+A+ +EK + D+ +LV R +
Sbjct: 145 GGRLFLVEPSGLNYEYKAWAVGKHRQAAKAEIEK--LKIEELDVNQLVKEAARIIMVVRD 202
Query: 198 NEMDLNNKNVSIAIVGPDT 254
D N + + VG T
Sbjct: 203 ENKD-KNVQIEMGWVGEQT 220
>Z46812-6|CAA86848.2| 546|Caenorhabditis elegans Hypothetical
protein ZK669.1b protein.
Length = 546
Score = 27.5 bits (58), Expect = 7.9
Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +3
Query: 21 PHIYQTC-PSANFFDCRAMAIGARSQSARTYLEKHLSTFIDCDLQELVAHGLRA 179
P I Q C +A D R G + + +H+ I+ + +L GLRA
Sbjct: 157 PRIQQVCGQAAKLVDRRTSIFGVPLKGLLEHQNRHIPLIIEKSIDQLQRRGLRA 210
>Z46812-5|CAA86847.2| 775|Caenorhabditis elegans Hypothetical
protein ZK669.1a protein.
Length = 775
Score = 27.5 bits (58), Expect = 7.9
Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +3
Query: 21 PHIYQTC-PSANFFDCRAMAIGARSQSARTYLEKHLSTFIDCDLQELVAHGLRA 179
P I Q C +A D R G + + +H+ I+ + +L GLRA
Sbjct: 386 PRIQQVCGQAAKLVDRRTSIFGVPLKGLLEHQNRHIPLIIEKSIDQLQRRGLRA 439
>Z37093-8|CAA85469.2| 546|Caenorhabditis elegans Hypothetical
protein ZK669.1b protein.
Length = 546
Score = 27.5 bits (58), Expect = 7.9
Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +3
Query: 21 PHIYQTC-PSANFFDCRAMAIGARSQSARTYLEKHLSTFIDCDLQELVAHGLRA 179
P I Q C +A D R G + + +H+ I+ + +L GLRA
Sbjct: 157 PRIQQVCGQAAKLVDRRTSIFGVPLKGLLEHQNRHIPLIIEKSIDQLQRRGLRA 210
>Z37093-7|CAA85468.2| 775|Caenorhabditis elegans Hypothetical
protein ZK669.1a protein.
Length = 775
Score = 27.5 bits (58), Expect = 7.9
Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +3
Query: 21 PHIYQTC-PSANFFDCRAMAIGARSQSARTYLEKHLSTFIDCDLQELVAHGLRA 179
P I Q C +A D R G + + +H+ I+ + +L GLRA
Sbjct: 386 PRIQQVCGQAAKLVDRRTSIFGVPLKGLLEHQNRHIPLIIEKSIDQLQRRGLRA 439
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 321 GAPHPRPEPGTCRVPPP 271
G P P P PG C PPP
Sbjct: 757 GPPPPPPPPGGCPPPPP 773
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 321 GAPHPRPEPGTCRVPPP 271
G P P P PG C PPP
Sbjct: 757 GPPPPPPPPGGCPPPPP 773
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 321 GAPHPRPEPGTCRVPPP 271
G P P P PG C PPP
Sbjct: 340 GPPPPPPPPGGCPPPPP 356
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,794,985
Number of Sequences: 27780
Number of extensions: 332429
Number of successful extensions: 1023
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1021
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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