Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_H15
         (608 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    25   0.44 
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    25   0.44 
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    25   0.77 
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   3.1  

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 25.4 bits (53), Expect = 0.44
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = +3

Query: 204 MDLNNKNVSIAIVGPDTPL 260
           + L+N N+S++ VGP +PL
Sbjct: 30  LSLDNSNMSMSSVGPQSPL 48


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 25.4 bits (53), Expect = 0.44
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = +3

Query: 204 MDLNNKNVSIAIVGPDTPL 260
           + L+N N+S++ VGP +PL
Sbjct: 30  LSLDNSNMSMSSVGPQSPL 48


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 24.6 bits (51), Expect = 0.77
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +2

Query: 368 RSGGRHRSTSRCGDGHGITAERLQETSEEMTILPSS 475
           R+ G   STS CG+   +  ++   +  E  I P S
Sbjct: 345 RARGNQPSTSECGEFRSVVVQKRNGSMIECNISPRS 380


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
            receptor protein.
          Length = 1040

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +3

Query: 72   MAIGARSQSARTYLEKHLSTFIDCDLQ 152
            +A+ A +      ++KH++T IDC  Q
Sbjct: 942  VALTAATCDQNKAVKKHITTTIDCSTQ 968


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,252
Number of Sequences: 438
Number of extensions: 4656
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17971191
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)