Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_H14
(450 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 37 0.008
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 36 0.018
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 36 0.018
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 36 0.018
Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical pr... 34 0.042
Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical pr... 34 0.042
Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical pr... 34 0.042
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 32 0.17
Z77658-8|CAE17788.1| 79|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 28 3.6
Z83129-9|CAB63325.2| 100|Caenorhabditis elegans Hypothetical pr... 27 4.8
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 27 4.8
AF016427-5|AAB65357.2| 273|Caenorhabditis elegans Ground-like (... 27 4.8
Z93383-9|CAB07630.1| 281|Caenorhabditis elegans Hypothetical pr... 27 6.3
Z50027-2|CAA90335.1| 188|Caenorhabditis elegans Hypothetical pr... 27 8.3
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 27 8.3
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 36.7 bits (81), Expect = 0.008
Identities = 19/41 (46%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = -2
Query: 314 GIGGGAGCA---SQCCVCSQR-ISSCGTCPPFRCRTLCCAP 204
G GGG GC +CC C +R + C TC RC T CC P
Sbjct: 78 GGGGGCGCCCCRPKCCCCCRRCCTCCRTCCCTRCCT-CCRP 117
Score = 33.9 bits (74), Expect = 0.055
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -2
Query: 314 GIGGGAGCASQCCVCSQRISSCGTCPPFRCRTLCCAPS*KC 192
G GGG G CC C + C CRT CC C
Sbjct: 74 GCGGGGGGGCGCCCCRPKCCCCCRRCCTCCRTCCCTRCCTC 114
Score = 29.1 bits (62), Expect = 1.6
Identities = 16/45 (35%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = -2
Query: 317 EGIGGGAGCASQCCVCSQRISS-CGTCPPFRCRTLCCAPS*KCST 186
+G G GC CC C CG C CR CC +C T
Sbjct: 60 QGGCGCCGCGCGCCGCGGGGGGGCGCCC---CRPKCCCCCRRCCT 101
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 35.5 bits (78), Expect = 0.018
Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Frame = -2
Query: 314 GIGGGAGCASQ----CCVCSQRISSCGTCPPFRCRTLCCAP 204
G GGG GC CC C + + C TC RC T CC P
Sbjct: 77 GGGGGCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCT-CCRP 116
Score = 33.5 bits (73), Expect = 0.073
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = -2
Query: 317 EGIGGGAGCASQCCVCSQRISSCGTCPPFRCRTLCCAPS*KCST 186
+G G GC CC C CG C CR CC +C T
Sbjct: 60 QGGCGCCGCGCGCCGCGGGGGGCGCC---CCRPRCCCCCRRCCT 100
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 35.5 bits (78), Expect = 0.018
Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Frame = -2
Query: 314 GIGGGAGCASQ----CCVCSQRISSCGTCPPFRCRTLCCAP 204
G GGG GC CC C + + C TC RC T CC P
Sbjct: 78 GGGGGCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCT-CCRP 117
Score = 33.5 bits (73), Expect = 0.073
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = -2
Query: 317 EGIGGGAGCASQCCVCSQRISSCGTCPPFRCRTLCCAPS*KCST 186
+G G GC CC C CG C CR CC +C T
Sbjct: 61 QGGCGCCGCGCGCCGCGGGGGGCGCC---CCRPRCCCCCRRCCT 101
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 35.5 bits (78), Expect = 0.018
Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Frame = -2
Query: 314 GIGGGAGCASQ----CCVCSQRISSCGTCPPFRCRTLCCAP 204
G GGG GC CC C + + C TC RC T CC P
Sbjct: 79 GGGGGCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCT-CCRP 118
Score = 33.5 bits (73), Expect = 0.073
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = -2
Query: 317 EGIGGGAGCASQCCVCSQRISSCGTCPPFRCRTLCCAPS*KCST 186
+G G GC CC C CG C CR CC +C T
Sbjct: 62 QGGCGCCGCGCGCCGCGGGGGGCGCC---CCRPRCCCCCRRCCT 102
>Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical
protein F29D10.2 protein.
Length = 149
Score = 34.3 bits (75), Expect = 0.042
Identities = 18/43 (41%), Positives = 18/43 (41%), Gaps = 4/43 (9%)
Frame = -2
Query: 308 GGGAGCASQCC----VCSQRISSCGTCPPFRCRTLCCAPS*KC 192
GGG GC CC C R C TC CRT CC C
Sbjct: 59 GGGGGCGCCCCRPRCCCCCRPKCCCTC----CRTCCCTRCCTC 97
Score = 32.3 bits (70), Expect = 0.17
Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 6/43 (13%)
Frame = -2
Query: 314 GIGGGAGCAS---QCCVCSQR---ISSCGTCPPFRCRTLCCAP 204
G GGG GC +CC C + + C TC RC T CC P
Sbjct: 59 GGGGGCGCCCCRPRCCCCCRPKCCCTCCRTCCCTRCCT-CCRP 100
>Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical
protein C06A1.7 protein.
Length = 149
Score = 34.3 bits (75), Expect = 0.042
Identities = 18/43 (41%), Positives = 18/43 (41%), Gaps = 4/43 (9%)
Frame = -2
Query: 308 GGGAGCASQCC----VCSQRISSCGTCPPFRCRTLCCAPS*KC 192
GGG GC CC C R C TC CRT CC C
Sbjct: 61 GGGGGCGCCCCRPRCCCCCRPKCCCTC----CRTCCCTRCCTC 99
Score = 32.3 bits (70), Expect = 0.17
Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 6/43 (13%)
Frame = -2
Query: 314 GIGGGAGCAS---QCCVCSQR---ISSCGTCPPFRCRTLCCAP 204
G GGG GC +CC C + + C TC RC T CC P
Sbjct: 61 GGGGGCGCCCCRPRCCCCCRPKCCCTCCRTCCCTRCCT-CCRP 102
>Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical
protein C06A1.6 protein.
Length = 152
Score = 34.3 bits (75), Expect = 0.042
Identities = 18/43 (41%), Positives = 18/43 (41%), Gaps = 4/43 (9%)
Frame = -2
Query: 308 GGGAGCASQCC----VCSQRISSCGTCPPFRCRTLCCAPS*KC 192
GGG GC CC C R C TC CRT CC C
Sbjct: 64 GGGGGCGCCCCRPRCCCCCRPKCCCTC----CRTCCCTRCCTC 102
Score = 32.3 bits (70), Expect = 0.17
Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 6/43 (13%)
Frame = -2
Query: 314 GIGGGAGCAS---QCCVCSQR---ISSCGTCPPFRCRTLCCAP 204
G GGG GC +CC C + + C TC RC T CC P
Sbjct: 64 GGGGGCGCCCCRPRCCCCCRPKCCCTCCRTCCCTRCCT-CCRP 105
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 32.3 bits (70), Expect = 0.17
Identities = 16/42 (38%), Positives = 16/42 (38%), Gaps = 3/42 (7%)
Frame = -2
Query: 308 GGGAGCAS---QCCVCSQRISSCGTCPPFRCRTLCCAPS*KC 192
GGG GC CC C R C CRT CC C
Sbjct: 74 GGGCGCCGCGCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTC 115
Score = 31.9 bits (69), Expect = 0.22
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Frame = -2
Query: 314 GIGGGAGCASQ--CCVCSQRISSCGTCPPFRCRTLCCAP 204
G G G C CC C + + C TC RC T CC P
Sbjct: 81 GCGCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCT-CCRP 118
>Z77658-8|CAE17788.1| 79|Caenorhabditis elegans Hypothetical
protein F14D7.11 protein.
Length = 79
Score = 28.7 bits (61), Expect = 2.1
Identities = 14/26 (53%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -2
Query: 281 CCVCSQRISSCGTCPPFRC-RTLCCA 207
CCVC Q SC C F C LCCA
Sbjct: 53 CCVCCQCCVSC--CSLFTCWAQLCCA 76
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 27.9 bits (59), Expect = 3.6
Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 3/44 (6%)
Frame = -2
Query: 314 GIGGGAGCASQCCVC-SQRISSCGTCPPFRCRTLC--CAPS*KC 192
G GGG G CC C + + +SCG P C C P C
Sbjct: 24 GGGGGGGGGGCCCGCGTPQPASCGCAPACPQAPSCPVCPPPQPC 67
>Z83129-9|CAB63325.2| 100|Caenorhabditis elegans Hypothetical
protein W06G6.9 protein.
Length = 100
Score = 27.5 bits (58), Expect = 4.8
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = -2
Query: 305 GGAGCASQCCVCSQRISSCGTCPPFRCRTLCCAP 204
GG C + CC C + C F C +LC P
Sbjct: 68 GGCCCDNDCCRCFNEVCRCVGSILF-CFSLCAPP 100
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical
protein R102.6 protein.
Length = 324
Score = 27.5 bits (58), Expect = 4.8
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -2
Query: 314 GIGGGAGCASQCCVCSQRISSCGTCPP 234
G GGG GC S C C+ C PP
Sbjct: 221 GGGGGCGCGSSCGGCNM---GCSCLPP 244
>AF016427-5|AAB65357.2| 273|Caenorhabditis elegans Ground-like (grd
related) protein13 protein.
Length = 273
Score = 27.5 bits (58), Expect = 4.8
Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Frame = -2
Query: 308 GGGAGCASQCCVC-SQRISSCGTCPPFRC 225
GGG GC Q C C + + CPP C
Sbjct: 23 GGGCGCRPQQCGCAAASLPVRSYCPPSPC 51
>Z93383-9|CAB07630.1| 281|Caenorhabditis elegans Hypothetical
protein F54B8.10 protein.
Length = 281
Score = 27.1 bits (57), Expect = 6.3
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 5/69 (7%)
Frame = -1
Query: 288 FAMLCLFSAYIFMRNLSSISLSYTLLCSILK---VFHSSFTRSKKETAPTVATT--RTSN 124
+ + CL S ++NL+ L TLLCS ++ F SF + P + R
Sbjct: 65 YYLACLISRLFVVKNLALYLLCPTLLCSTVRATLAFLISFDKVLASIFPILHHNHRRKIR 124
Query: 123 NRHFIFTIF 97
N H + +F
Sbjct: 125 NSHILLLVF 133
>Z50027-2|CAA90335.1| 188|Caenorhabditis elegans Hypothetical
protein C39B10.3 protein.
Length = 188
Score = 26.6 bits (56), Expect = 8.3
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2
Query: 179 KEEWNTFKMEHSKVYDNEMEDK 244
+EE TF ++ SK YD E+E+K
Sbjct: 80 QEEMLTFLVDASKKYDEELEEK 101
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 26.6 bits (56), Expect = 8.3
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -2
Query: 308 GGGAGCASQCC 276
GGG GC+S CC
Sbjct: 2157 GGGGGCSSSCC 2167
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,668,218
Number of Sequences: 27780
Number of extensions: 129266
Number of successful extensions: 596
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 570
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 788595652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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